RNA–Protein interactions for RNA: ENST00000539097.2

HIF1A-204, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-204ENST00000539097 MLXQ9UH92 298 aa0.84□□□□□ -2.27
HIF1A-204ENST00000539097 GSTK1Q9Y2Q3 226 aa0.84□□□□□ -2.27
HIF1A-204ENST00000539097 WDR45Q9Y484 360 aa0.84□□□□□ -2.27
HIF1A-204ENST00000539097 ABCC4O15439 1325 aa0.84□□□□□ -2.28
HIF1A-204ENST00000539097 LAMB2P55268 1798 aa0.84□□□□□ -2.28
HIF1A-204ENST00000539097 PLSCR5A0PG75 271 aa0.84□□□□□ -2.28
HIF1A-204ENST00000539097 PMS2P5A8MQ11 134 aa0.84□□□□□ -2.28
HIF1A-204ENST00000539097 E9PAM4 449 aa0.84□□□□□ -2.28
HIF1A-204ENST00000539097 H0YC42 278 aa0.84□□□□□ -2.28
HIF1A-204ENST00000539097 TAAR5O14804 337 aa0.84□□□□□ -2.28
HIF1A-204ENST00000539097 FCMRO60667 390 aa0.84□□□□□ -2.28
HIF1A-204ENST00000539097 SLC16A7O60669 478 aa0.84□□□□□ -2.28
HIF1A-204ENST00000539097 CDC123O75794 336 aaPredicted RBP0.84□□□□□ -2.28
HIF1A-204ENST00000539097 OR4F21O95013 312 aa0.84□□□□□ -2.28
HIF1A-204ENST00000539097 SEMA4FO95754 770 aa0.84□□□□□ -2.28
HIF1A-204ENST00000539097 ASNSP08243 561 aa0.84□□□□□ -2.28
HIF1A-204ENST00000539097 CT45A10P0DMU9 189 aa0.84□□□□□ -2.28
HIF1A-204ENST00000539097 TROVE2P10155 538 aaKnown RBP eCLIP0.84□□□□□ -2.28
HIF1A-204ENST00000539097 RNH1P13489 461 aaKnown RBP0.84□□□□□ -2.28
HIF1A-204ENST00000539097 ADRB3P13945 408 aa0.84□□□□□ -2.28
HIF1A-204ENST00000539097 CCNB1P14635 433 aa0.84□□□□□ -2.28
HIF1A-204ENST00000539097 XRCC1P18887 633 aaPredicted RBP0.84□□□□□ -2.28
HIF1A-204ENST00000539097 ADRA1AP35348 466 aa0.84□□□□□ -2.28
HIF1A-204ENST00000539097 DLSTP36957 453 aa0.84□□□□□ -2.28
HIF1A-204ENST00000539097 HTR2BP41595 481 aa0.84□□□□□ -2.28
HIF1A-204ENST00000539097 CDKN2AP42771 156 aaKnown RBP0.84□□□□□ -2.28
HIF1A-204ENST00000539097 ETV1P50549 477 aa0.84□□□□□ -2.28
HIF1A-204ENST00000539097 SSR4P51571 173 aa0.84□□□□□ -2.28
HIF1A-204ENST00000539097 PRMT2P55345 433 aa0.84□□□□□ -2.28
HIF1A-204ENST00000539097 RIPK4P57078 832 aa0.84□□□□□ -2.28
HIF1A-204ENST00000539097 KRTAP10-9P60411 292 aa0.84□□□□□ -2.28
HIF1A-204ENST00000539097 C1QTNF8P60827 252 aa0.84□□□□□ -2.28
HIF1A-204ENST00000539097 C3AR1Q16581 482 aa0.84□□□□□ -2.28
HIF1A-204ENST00000539097 AANATQ16613 207 aa0.84□□□□□ -2.28
HIF1A-204ENST00000539097 HSP90B2PQ58FF3 399 aa0.84□□□□□ -2.28
HIF1A-204ENST00000539097 C6orf226Q5I0X4 101 aa0.84□□□□□ -2.28
HIF1A-204ENST00000539097 MEDAGQ5VYS4 303 aa0.84□□□□□ -2.28
HIF1A-204ENST00000539097 PVRIGQ6DKI7 326 aa0.84□□□□□ -2.28
HIF1A-204ENST00000539097 OR5M10Q6IEU7 315 aa0.84□□□□□ -2.28
HIF1A-204ENST00000539097 ZSCAN25Q6NSZ9 544 aa0.84□□□□□ -2.28
HIF1A-204ENST00000539097 CYS1Q717R9 158 aa0.84□□□□□ -2.28
HIF1A-204ENST00000539097 TRIM69Q86WT6 500 aa0.84□□□□□ -2.28
HIF1A-204ENST00000539097 LRRC43Q8N309 656 aa0.84□□□□□ -2.28
HIF1A-204ENST00000539097 STPG4Q8N801 248 aa0.84□□□□□ -2.28
HIF1A-204ENST00000539097 C4orf32Q8N8J7 132 aa0.84□□□□□ -2.28
HIF1A-204ENST00000539097 NECAB1Q8N987 351 aa0.84□□□□□ -2.28
HIF1A-204ENST00000539097 CCDC148Q8NFR7 591 aa0.84□□□□□ -2.28
HIF1A-204ENST00000539097 RNF138Q8WVD3 245 aa0.84□□□□□ -2.28
HIF1A-204ENST00000539097 NR4A3Q92570 626 aa0.84□□□□□ -2.28
HIF1A-204ENST00000539097 MRPL24Q96A35 216 aaKnown RBP0.84□□□□□ -2.28
HIF1A-204ENST00000539097 FGGYQ96C11 551 aa0.84□□□□□ -2.28
HIF1A-204ENST00000539097 GALNT14Q96FL9 552 aa0.84□□□□□ -2.28
HIF1A-204ENST00000539097 C18orf12Q96KH6 178 aa0.84□□□□□ -2.28
HIF1A-204ENST00000539097 MBOAT7Q96N66 472 aa0.84□□□□□ -2.28
HIF1A-204ENST00000539097 ZNF396Q96N95 335 aaPredicted RBP0.84□□□□□ -2.28
HIF1A-204ENST00000539097 SECISBP2Q96T21 854 aaKnown RBP0.84□□□□□ -2.28
HIF1A-204ENST00000539097 GPR21Q99679 349 aa0.84□□□□□ -2.28
HIF1A-204ENST00000539097 TPPP3Q9BW30 176 aa0.84□□□□□ -2.28
HIF1A-204ENST00000539097 HCAR1Q9BXC0 346 aa0.84□□□□□ -2.28
HIF1A-204ENST00000539097 MAGT1Q9H0U3 335 aa0.84□□□□□ -2.28
HIF1A-204ENST00000539097 MTIF3Q9H2K0 278 aaKnown RBP0.84□□□□□ -2.28
HIF1A-204ENST00000539097 GPN2Q9H9Y4 310 aaPredicted RBP0.84□□□□□ -2.28
HIF1A-204ENST00000539097 SH3BGRL2Q9UJC5 107 aa0.84□□□□□ -2.28
HIF1A-204ENST00000539097 ZNF221Q9UK13 617 aa0.84□□□□□ -2.28
HIF1A-204ENST00000539097 CHMP2BQ9UQN3 213 aa0.84□□□□□ -2.28
HIF1A-204ENST00000539097 NCKAP1Q9Y2A7 1128 aa0.84□□□□□ -2.28
HIF1A-204ENST00000539097 TMED5Q9Y3A6 229 aa0.84□□□□□ -2.28
HIF1A-204ENST00000539097 NEUROG3Q9Y4Z2 214 aa0.84□□□□□ -2.28
HIF1A-204ENST00000539097 KIF25-AS1Q9Y6Z4 181 aa0.84□□□□□ -2.28
HIF1A-204ENST00000539097 AHNAK2Q8IVF2 5795 aa0.84□□□□□ -2.28
HIF1A-204ENST00000539097 EIF4G3O43432 1585 aaKnown RBP0.84□□□□□ -2.28
HIF1A-204ENST00000539097 DIP2AQ14689 1571 aa0.84□□□□□ -2.28
HIF1A-204ENST00000539097 TMEM131LA2VDJ0 1609 aa0.84□□□□□ -2.28
HIF1A-204ENST00000539097 RREB1Q92766 1687 aa0.84□□□□□ -2.28
HIF1A-204ENST00000539097 IGLV4-3A0A075B6K6 122 aa0.83□□□□□ -2.28
HIF1A-204ENST00000539097 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP0.83□□□□□ -2.28
HIF1A-204ENST00000539097 IGHV3-38A0A0C4DH36 116 aa0.83□□□□□ -2.28
HIF1A-204ENST00000539097 OR52A4PA6NMU1 304 aa0.83□□□□□ -2.28
HIF1A-204ENST00000539097 UBXN8O00124 270 aa0.83□□□□□ -2.28
HIF1A-204ENST00000539097 RIPK2O43353 540 aa0.83□□□□□ -2.28
HIF1A-204ENST00000539097 LATO43561 262 aa0.83□□□□□ -2.28
HIF1A-204ENST00000539097 MAGEC1O60732 1142 aa0.83□□□□□ -2.28
HIF1A-204ENST00000539097 B3GAT3O94766 335 aa0.83□□□□□ -2.28
HIF1A-204ENST00000539097 IGHEP01854 428 aa0.83□□□□□ -2.28
HIF1A-204ENST00000539097 CA3P07451 260 aa0.83□□□□□ -2.28
HIF1A-204ENST00000539097 TPM2P07951 284 aa0.83□□□□□ -2.28
HIF1A-204ENST00000539097 POLR2MP0CAP2 368 aa0.83□□□□□ -2.28
HIF1A-204ENST00000539097 ZSCAN5DPP0CG00 497 aa0.83□□□□□ -2.28
HIF1A-204ENST00000539097 KRT13P13646 458 aa0.83□□□□□ -2.28
HIF1A-204ENST00000539097 RPA2P15927 270 aa0.83□□□□□ -2.28
HIF1A-204ENST00000539097 GATA1P15976 413 aaPredicted RBP0.83□□□□□ -2.28
HIF1A-204ENST00000539097 NCK1P16333 377 aa0.83□□□□□ -2.28
HIF1A-204ENST00000539097 HAND2P61296 217 aa0.83□□□□□ -2.28
HIF1A-204ENST00000539097 RPL32P62910 135 aaKnown RBP0.83□□□□□ -2.28
HIF1A-204ENST00000539097 CBX1P83916 185 aa0.83□□□□□ -2.28
HIF1A-204ENST00000539097 PRKCEQ02156 737 aa0.83□□□□□ -2.28
HIF1A-204ENST00000539097 LIPEQ05469 1076 aa0.83□□□□□ -2.28
HIF1A-204ENST00000539097 ZNF177Q13360 481 aaPredicted RBP0.83□□□□□ -2.28
HIF1A-204ENST00000539097 IL18Q14116 193 aa0.83□□□□□ -2.28
HIF1A-204ENST00000539097 ELAVL3Q14576 367 aaKnown RBP0.83□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms