RNA–Protein interactions for RNA: ENST00000538834.5

CD9-208, Transcript of CD9 molecule, humanhuman

TSL 5

Gene CD9, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-208ENST00000538834 CAMK2AQ9UQM7 478 aa12.36□□□□□ -0.43
CD9-208ENST00000538834 RPH3AQ9Y2J0 694 aaPredicted RBP12.36□□□□□ -0.43
CD9-208ENST00000538834 WDR45Q9Y484 360 aa12.36□□□□□ -0.43
CD9-208ENST00000538834 ABCA4P78363 2273 aa12.36□□□□□ -0.43
CD9-208ENST00000538834 TEX15Q9BXT5 2789 aa12.35□□□□□ -0.43
CD9-208ENST00000538834 AGAP5A6NIR3 686 aa12.35□□□□□ -0.43
CD9-208ENST00000538834 CLCA1A8K7I4 914 aa12.35□□□□□ -0.43
CD9-208ENST00000538834 HSPB2A8KAH6 182 aa12.35□□□□□ -0.43
CD9-208ENST00000538834 ZNF264O43296 627 aa12.35□□□□□ -0.43
CD9-208ENST00000538834 ADAM11O75078 769 aa12.35□□□□□ -0.43
CD9-208ENST00000538834 H6PDO95479 791 aa12.35□□□□□ -0.43
CD9-208ENST00000538834 PRKCAP17252 672 aa12.35□□□□□ -0.43
CD9-208ENST00000538834 GPX2P18283 190 aa12.35□□□□□ -0.43
CD9-208ENST00000538834 CLDN20P56880 219 aa12.35□□□□□ -0.43
CD9-208ENST00000538834 STX1BP61266 288 aa12.35□□□□□ -0.43
CD9-208ENST00000538834 RAC1P63000 192 aa12.35□□□□□ -0.43
CD9-208ENST00000538834 GPR68Q15743 365 aa12.35□□□□□ -0.43
CD9-208ENST00000538834 TOMM34Q15785 309 aaPredicted RBP12.35□□□□□ -0.43
CD9-208ENST00000538834 HSPB2Q16082 182 aa12.35□□□□□ -0.43
CD9-208ENST00000538834 ATAD3BQ5T9A4 648 aa12.35□□□□□ -0.43
CD9-208ENST00000538834 C16orf62Q7Z3J2 963 aa12.35□□□□□ -0.43
CD9-208ENST00000538834 C10orf111Q8N326 155 aa12.35□□□□□ -0.43
CD9-208ENST00000538834 C9orf106Q8NAJ2 232 aa12.35□□□□□ -0.43
CD9-208ENST00000538834 RELL2Q8NC24 303 aaPredicted RBP12.35□□□□□ -0.43
CD9-208ENST00000538834 OR5W2Q8NH69 310 aa12.35□□□□□ -0.43
CD9-208ENST00000538834 PHOSPHO1Q8TCT1 267 aa12.35□□□□□ -0.43
CD9-208ENST00000538834 THOC1Q96FV9 657 aaKnown RBP12.35□□□□□ -0.43
CD9-208ENST00000538834 AURKBQ96GD4 344 aaPredicted RBP12.35□□□□□ -0.43
CD9-208ENST00000538834 ZFP3Q96NJ6 502 aa12.35□□□□□ -0.43
CD9-208ENST00000538834 SPOCK3Q9BQ16 436 aa12.35□□□□□ -0.43
CD9-208ENST00000538834 RABEP2Q9H5N1 569 aa12.35□□□□□ -0.43
CD9-208ENST00000538834 MTHFD2LQ9H903 347 aaPredicted RBP12.35□□□□□ -0.43
CD9-208ENST00000538834 EXOSC3Q9NQT5 275 aaKnown RBP12.35□□□□□ -0.43
CD9-208ENST00000538834 FGFR1OP2Q9NVK5 253 aa12.35□□□□□ -0.43
CD9-208ENST00000538834 VAPAQ9P0L0 249 aa12.35□□□□□ -0.43
CD9-208ENST00000538834 DCTN4Q9UJW0 460 aa12.35□□□□□ -0.43
CD9-208ENST00000538834 PRDM4Q9UKN5 801 aa12.35□□□□□ -0.43
CD9-208ENST00000538834 CARD8Q9Y2G2 431 aa12.35□□□□□ -0.43
CD9-208ENST00000538834 NOTCH2Q04721 2471 aa12.34□□□□□ -0.43
CD9-208ENST00000538834 HRNRQ86YZ3 2850 aaPredicted RBP12.34□□□□□ -0.43
CD9-208ENST00000538834 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.34□□□□□ -0.43
CD9-208ENST00000538834 SHISA8B8ZZ34 492 aa12.34□□□□□ -0.43
CD9-208ENST00000538834 PRSS44E7EML9 344 aa12.34□□□□□ -0.43
CD9-208ENST00000538834 H0YC42 278 aa12.34□□□□□ -0.43
CD9-208ENST00000538834 H3BNH8 94 aa12.34□□□□□ -0.43
CD9-208ENST00000538834 CLIC1O00299 241 aa12.34□□□□□ -0.43
CD9-208ENST00000538834 ETFAP13804 333 aa12.34□□□□□ -0.43
CD9-208ENST00000538834 HPGDP15428 266 aa12.34□□□□□ -0.43
CD9-208ENST00000538834 ELK4P28324 431 aa12.34□□□□□ -0.43
CD9-208ENST00000538834 GCKP35557 465 aa12.34□□□□□ -0.43
CD9-208ENST00000538834 EIF1P41567 113 aaKnown RBP12.34□□□□□ -0.43
CD9-208ENST00000538834 ANXA11P50995 505 aaKnown RBP12.34□□□□□ -0.43
CD9-208ENST00000538834 TPD52P55327 224 aaPredicted RBP12.34□□□□□ -0.43
CD9-208ENST00000538834 FADDQ13158 208 aa12.34□□□□□ -0.43
CD9-208ENST00000538834 NDUFAF6Q330K2 333 aa12.34□□□□□ -0.43
CD9-208ENST00000538834 SLC25A35Q3KQZ1 300 aa12.34□□□□□ -0.43
CD9-208ENST00000538834 AGKQ53H12 422 aa12.34□□□□□ -0.43
CD9-208ENST00000538834 PRAMEF8Q5VWM4 474 aa12.34□□□□□ -0.43
CD9-208ENST00000538834 PRAMEF7Q5VXH5 474 aa12.34□□□□□ -0.43
CD9-208ENST00000538834 ZNF787Q6DD87 383 aa12.34□□□□□ -0.43
CD9-208ENST00000538834 RETREG3Q86VR2 466 aa12.34□□□□□ -0.43
CD9-208ENST00000538834 CMIPQ8IY22 773 aa12.34□□□□□ -0.43
CD9-208ENST00000538834 OR5M1Q8NGP8 315 aa12.34□□□□□ -0.43
CD9-208ENST00000538834 CA5BP1Q8WTZ4 195 aa12.34□□□□□ -0.43
CD9-208ENST00000538834 SLC38A5Q8WUX1 472 aa12.34□□□□□ -0.43
CD9-208ENST00000538834 CHMP6Q96FZ7 201 aa12.34□□□□□ -0.43
CD9-208ENST00000538834 SH3YL1Q96HL8 342 aaPredicted RBP12.34□□□□□ -0.43
CD9-208ENST00000538834 TMEM120AQ9BXJ8 343 aa12.34□□□□□ -0.43
CD9-208ENST00000538834 UCK2Q9BZX2 261 aa12.34□□□□□ -0.43
CD9-208ENST00000538834 IKZF5Q9H5V7 419 aa12.34□□□□□ -0.43
CD9-208ENST00000538834 BCL2L10Q9HD36 194 aa12.34□□□□□ -0.43
CD9-208ENST00000538834 THUMPD1Q9NXG2 353 aaKnown RBP12.34□□□□□ -0.43
CD9-208ENST00000538834 ALKBH4Q9NXW9 302 aa12.34□□□□□ -0.43
CD9-208ENST00000538834 VDAC3Q9Y277 283 aa12.34□□□□□ -0.43
CD9-208ENST00000538834 CHST2Q9Y4C5 530 aa12.34□□□□□ -0.43
CD9-208ENST00000538834 GPC6Q9Y625 555 aaPredicted RBP12.34□□□□□ -0.43
CD9-208ENST00000538834 A0A0G2JND7 137 aa12.33□□□□□ -0.44
CD9-208ENST00000538834 FAAHO00519 579 aa12.33□□□□□ -0.44
CD9-208ENST00000538834 TGM6O95932 706 aa12.33□□□□□ -0.44
CD9-208ENST00000538834 UBL4AP11441 157 aa12.33□□□□□ -0.44
CD9-208ENST00000538834 IL11P20809 199 aa12.33□□□□□ -0.44
CD9-208ENST00000538834 PCYT1AP49585 367 aa12.33□□□□□ -0.44
CD9-208ENST00000538834 KCNJ10P78508 379 aa12.33□□□□□ -0.44
CD9-208ENST00000538834 HSP90B2PQ58FF3 399 aa12.33□□□□□ -0.44
CD9-208ENST00000538834 RUNDC3AQ59EK9 446 aa12.33□□□□□ -0.44
CD9-208ENST00000538834 RAET1LQ5VY80 246 aa12.33□□□□□ -0.44
CD9-208ENST00000538834 DNAJC14Q6Y2X3 702 aaPredicted RBP12.33□□□□□ -0.44
CD9-208ENST00000538834 GRAMD2AQ8IUY3 354 aa12.33□□□□□ -0.44
CD9-208ENST00000538834 ZNF295-AS1Q8N0V1 137 aa12.33□□□□□ -0.44
CD9-208ENST00000538834 PNPT1Q8TCS8 783 aaKnown RBP12.33□□□□□ -0.44
CD9-208ENST00000538834 MRGPRX4Q96LA9 322 aa12.33□□□□□ -0.44
CD9-208ENST00000538834 RNF145Q96MT1 663 aa12.33□□□□□ -0.44
CD9-208ENST00000538834 TRIB1Q96RU8 372 aa12.33□□□□□ -0.44
CD9-208ENST00000538834 TM9SF2Q99805 663 aa12.33□□□□□ -0.44
CD9-208ENST00000538834 A4GALTQ9NPC4 353 aa12.33□□□□□ -0.44
CD9-208ENST00000538834 SAR1AQ9NR31 198 aa12.33□□□□□ -0.44
CD9-208ENST00000538834 TRIM33Q9UPN9 1127 aa12.33□□□□□ -0.44
CD9-208ENST00000538834 SLC35A3Q9Y2D2 325 aa12.33□□□□□ -0.44
CD9-208ENST00000538834 ZNF175Q9Y473 711 aa12.33□□□□□ -0.44
CD9-208ENST00000538834 A0A0J9YW62 118 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms