RNA–Protein interactions for RNA: ENST00000538375.5

COPS7A-207, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 898 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-207ENST00000538375 ARSGQ96EG1 525 aa11.93□□□□□ -0.5
COPS7A-207ENST00000538375 TMEM19Q96HH6 336 aa11.93□□□□□ -0.5
COPS7A-207ENST00000538375 RNF145Q96MT1 663 aa11.93□□□□□ -0.5
COPS7A-207ENST00000538375 KLHDC3Q9BQ90 382 aa11.93□□□□□ -0.5
COPS7A-207ENST00000538375 TUBA1CQ9BQE3 449 aa11.93□□□□□ -0.5
COPS7A-207ENST00000538375 TRIM8Q9BZR9 551 aa11.93□□□□□ -0.5
COPS7A-207ENST00000538375 LAT2Q9GZY6 243 aa11.93□□□□□ -0.5
COPS7A-207ENST00000538375 ARMCX1Q9P291 453 aa11.93□□□□□ -0.5
COPS7A-207ENST00000538375 PLEKHB1Q9UF11 243 aaPredicted RBP11.93□□□□□ -0.5
COPS7A-207ENST00000538375 ICAM5Q9UMF0 924 aa11.93□□□□□ -0.5
COPS7A-207ENST00000538375 ZNF232Q9UNY5 417 aa11.93□□□□□ -0.5
COPS7A-207ENST00000538375 CORO2BQ9UQ03 480 aa11.93□□□□□ -0.5
COPS7A-207ENST00000538375 RNF6Q9Y252 685 aa11.93□□□□□ -0.5
COPS7A-207ENST00000538375 SLC35A3Q9Y2D2 325 aa11.93□□□□□ -0.5
COPS7A-207ENST00000538375 L3MBTL1Q9Y468 752 aa11.93□□□□□ -0.5
COPS7A-207ENST00000538375 AP4B1Q9Y6B7 739 aa11.93□□□□□ -0.5
COPS7A-207ENST00000538375 CAPN7Q9Y6W3 813 aa11.93□□□□□ -0.5
COPS7A-207ENST00000538375 ZNF407Q9C0G0 2248 aa11.92□□□□□ -0.5
COPS7A-207ENST00000538375 FREM3P0C091 2139 aa11.92□□□□□ -0.5
COPS7A-207ENST00000538375 PRRC2CQ9Y520 2896 aaKnown RBP11.92□□□□□ -0.5
COPS7A-207ENST00000538375 A0A0G2JPF8 293 aa11.92□□□□□ -0.5
COPS7A-207ENST00000538375 AGAP5A6NIR3 686 aa11.92□□□□□ -0.5
COPS7A-207ENST00000538375 CLDN24A6NM45 220 aa11.92□□□□□ -0.5
COPS7A-207ENST00000538375 KDM4EB2RXH2 506 aaPredicted RBP11.92□□□□□ -0.5
COPS7A-207ENST00000538375 HNRNPCL2B2RXH8 293 aa11.92□□□□□ -0.5
COPS7A-207ENST00000538375 HNRNPCL3B7ZW38 293 aa11.92□□□□□ -0.5
COPS7A-207ENST00000538375 PRSS44E7EML9 344 aa11.92□□□□□ -0.5
COPS7A-207ENST00000538375 HNRNPCL1O60812 293 aaKnown RBP11.92□□□□□ -0.5
COPS7A-207ENST00000538375 IL2RAP01589 272 aa11.92□□□□□ -0.5
COPS7A-207ENST00000538375 HNRNPCL4P0DMR1 293 aa11.92□□□□□ -0.5
COPS7A-207ENST00000538375 ZNF708P17019 499 aa11.92□□□□□ -0.5
COPS7A-207ENST00000538375 HOXB9P17482 250 aaPredicted RBP11.92□□□□□ -0.5
COPS7A-207ENST00000538375 ME2P23368 584 aa11.92□□□□□ -0.5
COPS7A-207ENST00000538375 COL8A1P27658 744 aa11.92□□□□□ -0.5
COPS7A-207ENST00000538375 ADH7P40394 386 aa11.92□□□□□ -0.5
COPS7A-207ENST00000538375 EIF1P41567 113 aaKnown RBP11.92□□□□□ -0.5
COPS7A-207ENST00000538375 SUCLG1P53597 346 aaKnown RBP11.92□□□□□ -0.5
COPS7A-207ENST00000538375 SUMO3P55854 103 aaPredicted RBP11.92□□□□□ -0.5
COPS7A-207ENST00000538375 CLDN18P56856 261 aa11.92□□□□□ -0.5
COPS7A-207ENST00000538375 EEFSECP57772 596 aaKnown RBP11.92□□□□□ -0.5
COPS7A-207ENST00000538375 CYLC2Q14093 348 aaPredicted RBP11.92□□□□□ -0.5
COPS7A-207ENST00000538375 CAPRIN1Q14444 709 aaKnown RBP11.92□□□□□ -0.5
COPS7A-207ENST00000538375 QPRTQ15274 297 aa11.92□□□□□ -0.5
COPS7A-207ENST00000538375 MAPK11Q15759 364 aa11.92□□□□□ -0.5
COPS7A-207ENST00000538375 TOMM34Q15785 309 aaPredicted RBP11.92□□□□□ -0.5
COPS7A-207ENST00000538375 BCL2A1Q16548 175 aa11.92□□□□□ -0.5
COPS7A-207ENST00000538375 HIST2H2BCQ6DN03 193 aa11.92□□□□□ -0.5
COPS7A-207ENST00000538375 POMZP3Q6PJE2 187 aa11.92□□□□□ -0.5
COPS7A-207ENST00000538375 PLXDC2Q6UX71 529 aa11.92□□□□□ -0.5
COPS7A-207ENST00000538375 P4HA3Q7Z4N8 544 aa11.92□□□□□ -0.5
COPS7A-207ENST00000538375 MTDHQ86UE4 582 aaKnown RBP11.92□□□□□ -0.5
COPS7A-207ENST00000538375 VRK2Q86Y07 508 aa11.92□□□□□ -0.5
COPS7A-207ENST00000538375 LACC1Q8IV20 430 aa11.92□□□□□ -0.5
COPS7A-207ENST00000538375 DPP10Q8N608 796 aa11.92□□□□□ -0.5
COPS7A-207ENST00000538375 TNIP2Q8NFZ5 429 aa11.92□□□□□ -0.5
COPS7A-207ENST00000538375 FBXO27Q8NI29 283 aa11.92□□□□□ -0.5
COPS7A-207ENST00000538375 NFKBIDQ8NI38 313 aa11.92□□□□□ -0.5
COPS7A-207ENST00000538375 ZNF563Q8TA94 476 aa11.92□□□□□ -0.5
COPS7A-207ENST00000538375 ASB5Q8WWX0 329 aa11.92□□□□□ -0.5
COPS7A-207ENST00000538375 CNOT9Q92600 299 aaKnown RBP11.92□□□□□ -0.5
COPS7A-207ENST00000538375 ANKRD27Q96NW4 1050 aa11.92□□□□□ -0.5
COPS7A-207ENST00000538375 CGREF1Q99674 301 aa11.92□□□□□ -0.5
COPS7A-207ENST00000538375 NPAS1Q99742 590 aa11.92□□□□□ -0.5
COPS7A-207ENST00000538375 TREX2Q9BQ50 279 aaPredicted RBP11.92□□□□□ -0.5
COPS7A-207ENST00000538375 IKZF5Q9H5V7 419 aa11.92□□□□□ -0.5
COPS7A-207ENST00000538375 TMEM185BQ9H7F4 350 aa11.92□□□□□ -0.5
COPS7A-207ENST00000538375 A4GALTQ9NPC4 353 aa11.92□□□□□ -0.5
COPS7A-207ENST00000538375 ICE1Q9Y2F5 2266 aa11.91□□□□□ -0.5
COPS7A-207ENST00000538375 RP1L1Q8IWN7 2480 aaPredicted RBP11.91□□□□□ -0.5
COPS7A-207ENST00000538375 TRBV5-3A0A0A0MS03 114 aa11.91□□□□□ -0.5
COPS7A-207ENST00000538375 A0A0G2JNJ9 132 aa11.91□□□□□ -0.5
COPS7A-207ENST00000538375 FAM90A27PA6NNH2 459 aa11.91□□□□□ -0.5
COPS7A-207ENST00000538375 CLCA1A8K7I4 914 aa11.91□□□□□ -0.5
COPS7A-207ENST00000538375 H0YC42 278 aa11.91□□□□□ -0.5
COPS7A-207ENST00000538375 FBP2O00757 339 aa11.91□□□□□ -0.5
COPS7A-207ENST00000538375 EIF1AYO14602 144 aaKnown RBP11.91□□□□□ -0.5
COPS7A-207ENST00000538375 MRASO14807 208 aa11.91□□□□□ -0.5
COPS7A-207ENST00000538375 CLDN14O95500 239 aa11.91□□□□□ -0.5
COPS7A-207ENST00000538375 LINGO3P0C6S8 592 aa11.91□□□□□ -0.5
COPS7A-207ENST00000538375 GPX2P18283 190 aa11.91□□□□□ -0.5
COPS7A-207ENST00000538375 PGCP20142 388 aa11.91□□□□□ -0.5
COPS7A-207ENST00000538375 AGAP20933 346 aa11.91□□□□□ -0.5
COPS7A-207ENST00000538375 DRD4P21917 467 aa11.91□□□□□ -0.5
COPS7A-207ENST00000538375 ADSLP30566 484 aaPredicted RBP11.91□□□□□ -0.5
COPS7A-207ENST00000538375 CHRNB4P30926 498 aa11.91□□□□□ -0.5
COPS7A-207ENST00000538375 PGM1P36871 562 aa11.91□□□□□ -0.5
COPS7A-207ENST00000538375 TPD52P55327 224 aaPredicted RBP11.91□□□□□ -0.5
COPS7A-207ENST00000538375 CLDN20P56880 219 aa11.91□□□□□ -0.5
COPS7A-207ENST00000538375 MTPNP58546 118 aa11.91□□□□□ -0.5
COPS7A-207ENST00000538375 RPS3AP61247 264 aaKnown RBP11.91□□□□□ -0.5
COPS7A-207ENST00000538375 CDK6Q00534 326 aa11.91□□□□□ -0.5
COPS7A-207ENST00000538375 FOXF1Q12946 379 aa11.91□□□□□ -0.5
COPS7A-207ENST00000538375 SKP2Q13309 424 aa11.91□□□□□ -0.5
COPS7A-207ENST00000538375 ART3Q13508 389 aa11.91□□□□□ -0.5
COPS7A-207ENST00000538375 LARS2Q15031 903 aaKnown RBP11.91□□□□□ -0.5
COPS7A-207ENST00000538375 CYP51A1Q16850 503 aa11.91□□□□□ -0.5
COPS7A-207ENST00000538375 TMEM44Q2T9K0 475 aa11.91□□□□□ -0.5
COPS7A-207ENST00000538375 NSUN5P2Q63ZY6 315 aa11.91□□□□□ -0.5
COPS7A-207ENST00000538375 REP15Q6BDI9 236 aa11.91□□□□□ -0.5
COPS7A-207ENST00000538375 MYO7BQ6PIF6 2116 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms