RNA–Protein interactions for RNA: ENST00000536710.1

PRKDC-208, Transcript of protein kinase, DNA-activated, catalytic subunit, human

TSL 4

Gene PRKDC, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKDC-208	ENST00000536710	TIGIT	Q495A1	244 aa		4.11	□□□□□ -1.75
PRKDC-208	ENST00000536710	PAN3	Q58A45	887 aa	Known RBP	4.11	□□□□□ -1.75
PRKDC-208	ENST00000536710	P2RY8	Q86VZ1	359 aa		4.11	□□□□□ -1.75
PRKDC-208	ENST00000536710	CDC20B	Q86Y33	519 aa		4.11	□□□□□ -1.75
PRKDC-208	ENST00000536710	DHRSX	Q8N5I4	330 aa		4.11	□□□□□ -1.75
PRKDC-208	ENST00000536710	FAM133A	Q8N9E0	248 aa		4.11	□□□□□ -1.75
PRKDC-208	ENST00000536710	OR10A7	Q8NGE5	316 aa		4.11	□□□□□ -1.75
PRKDC-208	ENST00000536710	ZNF606	Q8WXB4	792 aa		4.11	□□□□□ -1.75
PRKDC-208	ENST00000536710	PELI1	Q96FA3	418 aa		4.11	□□□□□ -1.75
PRKDC-208	ENST00000536710	FOXN4	Q96NZ1	517 aa		4.11	□□□□□ -1.75
PRKDC-208	ENST00000536710	TGM7	Q96PF1	710 aa		4.11	□□□□□ -1.75
PRKDC-208	ENST00000536710	SIGLEC12	Q96PQ1	595 aa		4.11	□□□□□ -1.75
PRKDC-208	ENST00000536710	CYP2S1	Q96SQ9	504 aa		4.11	□□□□□ -1.75
PRKDC-208	ENST00000536710	DPH7	Q9BTV6	452 aa		4.11	□□□□□ -1.75
PRKDC-208	ENST00000536710	SPATA16	Q9BXB7	569 aa		4.11	□□□□□ -1.75
PRKDC-208	ENST00000536710	IKZF5	Q9H5V7	419 aa		4.11	□□□□□ -1.75
PRKDC-208	ENST00000536710	LRRC40	Q9H9A6	602 aa		4.11	□□□□□ -1.75
PRKDC-208	ENST00000536710	EXTL2	Q9UBQ6	330 aa		4.11	□□□□□ -1.75
PRKDC-208	ENST00000536710	PTCH1	Q13635	1447 aa		4.11	□□□□□ -1.75
PRKDC-208	ENST00000536710	TDRD15	B5MCY1	1934 aa	Known RBP	4.11	□□□□□ -1.75
PRKDC-208	ENST00000536710	SYNJ2BP-COX16	A0A087WUM0	186 aa		4.1	□□□□□ -1.75
PRKDC-208	ENST00000536710	IGHV3-35	A0A0C4DH35	117 aa		4.1	□□□□□ -1.75
PRKDC-208	ENST00000536710	DHRS7C	A6NNS2	312 aa		4.1	□□□□□ -1.75
PRKDC-208	ENST00000536710	PRRG1	O14668	218 aa		4.1	□□□□□ -1.75
PRKDC-208	ENST00000536710	TSC22D2	O75157	780 aa		4.1	□□□□□ -1.75
PRKDC-208	ENST00000536710	SNN	O75324	88 aa	Predicted RBP	4.1	□□□□□ -1.75
PRKDC-208	ENST00000536710	HSMCR30	P0CW71	290 aa		4.1	□□□□□ -1.75
PRKDC-208	ENST00000536710	PNMT	P11086	282 aa		4.1	□□□□□ -1.75
PRKDC-208	ENST00000536710	RDX	P35241	583 aa	Known RBP	4.1	□□□□□ -1.75
PRKDC-208	ENST00000536710	MDH2	P40926	338 aa	Known RBP	4.1	□□□□□ -1.75
PRKDC-208	ENST00000536710	RIPK1	Q13546	671 aa		4.1	□□□□□ -1.75
PRKDC-208	ENST00000536710	TP53I3	Q53FA7	332 aa		4.1	□□□□□ -1.75
PRKDC-208	ENST00000536710	SPATA46	Q5T0L3	261 aa		4.1	□□□□□ -1.75
PRKDC-208	ENST00000536710	ATL3	Q6DD88	541 aa		4.1	□□□□□ -1.75
PRKDC-208	ENST00000536710	TPRA1	Q86W33	373 aa		4.1	□□□□□ -1.75
PRKDC-208	ENST00000536710	VSTM4	Q8IW00	320 aa		4.1	□□□□□ -1.75
PRKDC-208	ENST00000536710	ZCCHC7	Q8N3Z6	543 aa	Known RBP	4.1	□□□□□ -1.75
PRKDC-208	ENST00000536710	KIR3DL3	Q8N743	410 aa		4.1	□□□□□ -1.75
PRKDC-208	ENST00000536710	ATP6V0D2	Q8N8Y2	350 aa		4.1	□□□□□ -1.75
PRKDC-208	ENST00000536710	OR4D5	Q8NGN0	318 aa		4.1	□□□□□ -1.75
PRKDC-208	ENST00000536710	OR1F12	Q8NHA8	337 aa		4.1	□□□□□ -1.75
PRKDC-208	ENST00000536710	EMG1	Q92979	244 aa	Known RBP	4.1	□□□□□ -1.75
PRKDC-208	ENST00000536710	ANKRD9	Q96BM1	317 aa	Predicted RBP	4.1	□□□□□ -1.75
PRKDC-208	ENST00000536710	NOL4L	Q96MY1	436 aa	Predicted RBP	4.1	□□□□□ -1.75
PRKDC-208	ENST00000536710	MYCBP	Q99417	103 aa	Predicted RBP	4.1	□□□□□ -1.75
PRKDC-208	ENST00000536710	APMAP	Q9HDC9	416 aa		4.1	□□□□□ -1.75
PRKDC-208	ENST00000536710	UFSP2	Q9NUQ7	469 aa		4.1	□□□□□ -1.75
PRKDC-208	ENST00000536710	IL36G	Q9NZH8	169 aa		4.1	□□□□□ -1.75
PRKDC-208	ENST00000536710	PIPOX	Q9P0Z9	390 aa		4.1	□□□□□ -1.75
PRKDC-208	ENST00000536710	SPRR3	Q9UBC9	169 aa		4.1	□□□□□ -1.75
PRKDC-208	ENST00000536710	USP16	Q9Y5T5	823 aa		4.1	□□□□□ -1.75
PRKDC-208	ENST00000536710	SLCO1B1	Q9Y6L6	691 aa		4.1	□□□□□ -1.75
PRKDC-208	ENST00000536710	ANKRD30B	Q9BXX2	1392 aa		4.1	□□□□□ -1.75
PRKDC-208	ENST00000536710	COL5A2	P05997	1499 aa	Predicted RBP	4.1	□□□□□ -1.75
PRKDC-208	ENST00000536710	SMIM28	A0A1B0GU29	152 aa		4.09	□□□□□ -1.75
PRKDC-208	ENST00000536710	LRP5L	A4QPB2	252 aa		4.09	□□□□□ -1.75
PRKDC-208	ENST00000536710	KIF2A	O00139	706 aa	Predicted RBP	4.09	□□□□□ -1.75
PRKDC-208	ENST00000536710	LAT	O43561	262 aa		4.09	□□□□□ -1.75
PRKDC-208	ENST00000536710	NUDT21	O43809	227 aa	Known RBP	4.09	□□□□□ -1.75
PRKDC-208	ENST00000536710	UGT2B17	O75795	530 aa		4.09	□□□□□ -1.75
PRKDC-208	ENST00000536710	SCGN	O76038	276 aa		4.09	□□□□□ -1.75
PRKDC-208	ENST00000536710	CCDC166	P0CW27	439 aa		4.09	□□□□□ -1.75
PRKDC-208	ENST00000536710	VDAC1	P21796	283 aa		4.09	□□□□□ -1.75
PRKDC-208	ENST00000536710	PCMT1	P22061	227 aa		4.09	□□□□□ -1.75
PRKDC-208	ENST00000536710	GCK	P35557	465 aa		4.09	□□□□□ -1.75
PRKDC-208	ENST00000536710	AIF1	P55008	147 aa		4.09	□□□□□ -1.75
PRKDC-208	ENST00000536710	GANAB	Q14697	944 aa	Known RBP	4.09	□□□□□ -1.75
PRKDC-208	ENST00000536710	EXOC3L2	Q2M3D2	409 aa		4.09	□□□□□ -1.75
PRKDC-208	ENST00000536710	PAGE2B	Q5JRK9	111 aa		4.09	□□□□□ -1.75
PRKDC-208	ENST00000536710	ZNF658	Q5TYW1	1059 aa	Predicted RBP	4.09	□□□□□ -1.75
PRKDC-208	ENST00000536710	LIPN	Q5VXI9	398 aa		4.09	□□□□□ -1.75
PRKDC-208	ENST00000536710	WSCD1	Q658N2	575 aa		4.09	□□□□□ -1.75
PRKDC-208	ENST00000536710	OR5M10	Q6IEU7	315 aa		4.09	□□□□□ -1.75
PRKDC-208	ENST00000536710	ZSCAN25	Q6NSZ9	544 aa		4.09	□□□□□ -1.75
PRKDC-208	ENST00000536710	CGB2	Q6NT52	195 aa		4.09	□□□□□ -1.75
PRKDC-208	ENST00000536710	ZNF774	Q6NX45	483 aa		4.09	□□□□□ -1.75
PRKDC-208	ENST00000536710	FAM199X	Q6PEV8	388 aa	Predicted RBP	4.09	□□□□□ -1.75
PRKDC-208	ENST00000536710	ZNF679	Q8IYX0	411 aa		4.09	□□□□□ -1.75
PRKDC-208	ENST00000536710	CLEC4F	Q8N1N0	589 aa		4.09	□□□□□ -1.75
PRKDC-208	ENST00000536710	CD177	Q8N6Q3	437 aa		4.09	□□□□□ -1.75
PRKDC-208	ENST00000536710	EIF1AD	Q8N9N8	165 aa	Known RBP	4.09	□□□□□ -1.75
PRKDC-208	ENST00000536710	MAIP1	Q8WWC4	291 aa		4.09	□□□□□ -1.75
PRKDC-208	ENST00000536710	SHC3	Q92529	594 aa		4.09	□□□□□ -1.75
PRKDC-208	ENST00000536710	CELF6	Q96J87	481 aa	Known RBP	4.09	□□□□□ -1.75
PRKDC-208	ENST00000536710	PSKH2	Q96QS6	385 aa		4.09	□□□□□ -1.75
PRKDC-208	ENST00000536710	NPAS2	Q99743	824 aa		4.09	□□□□□ -1.75
PRKDC-208	ENST00000536710	CAPS2	Q9BXY5	557 aa		4.09	□□□□□ -1.75
PRKDC-208	ENST00000536710	GLIPR2	Q9H4G4	154 aa		4.09	□□□□□ -1.75
PRKDC-208	ENST00000536710	RPS10P5	Q9NQ39	176 aa		4.09	□□□□□ -1.75
PRKDC-208	ENST00000536710	COX16	Q9P0S2	106 aa		4.09	□□□□□ -1.75
PRKDC-208	ENST00000536710	WRAP73	Q9P2S5	460 aa	Predicted RBP	4.09	□□□□□ -1.75
PRKDC-208	ENST00000536710	ZNF107	Q9UII5	783 aa	Predicted RBP	4.09	□□□□□ -1.75
PRKDC-208	ENST00000536710	RIMS3	Q9UJD0	308 aa		4.09	□□□□□ -1.75
PRKDC-208	ENST00000536710	FLVCR1	Q9Y5Y0	555 aa		4.09	□□□□□ -1.75
PRKDC-208	ENST00000536710	IGHV2-70D	A0A0C4DH43	119 aa		4.08	□□□□□ -1.76
PRKDC-208	ENST00000536710	LOC100131303	A0A0U1RQF7	123 aa		4.08	□□□□□ -1.76
PRKDC-208	ENST00000536710		B4DXG7	233 aa		4.08	□□□□□ -1.76
PRKDC-208	ENST00000536710	RS1	O15537	224 aa		4.08	□□□□□ -1.76
PRKDC-208	ENST00000536710	BCL2L11	O43521	198 aa		4.08	□□□□□ -1.76
PRKDC-208	ENST00000536710	CACNA1F	O60840	1977 aa		4.08	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms