RNA–Protein interactions for RNA: ENST00000536079.5

DDX55-204, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 765 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-204ENST00000536079 ZNF836Q6ZNA1 936 aa16.15■□□□□ 0.18
DDX55-204ENST00000536079 EIF3MQ7L2H7 374 aaKnown RBP16.15■□□□□ 0.18
DDX55-204ENST00000536079 COMTD1Q86VU5 262 aa16.15■□□□□ 0.18
DDX55-204ENST00000536079 TMCO5AQ8N6Q1 288 aa16.15■□□□□ 0.18
DDX55-204ENST00000536079 OR52P1PQ8NH57 321 aa16.15■□□□□ 0.18
DDX55-204ENST00000536079 OR5W2Q8NH69 310 aa16.15■□□□□ 0.18
DDX55-204ENST00000536079 RNF145Q96MT1 663 aa16.15■□□□□ 0.18
DDX55-204ENST00000536079 CCT8L2Q96SF2 557 aa16.15■□□□□ 0.18
DDX55-204ENST00000536079 TUBA1CQ9BQE3 449 aa16.15■□□□□ 0.18
DDX55-204ENST00000536079 KAT8Q9H7Z6 458 aaKnown RBP16.15■□□□□ 0.18
DDX55-204ENST00000536079 ST6GALNAC1Q9NSC7 600 aaPredicted RBP16.15■□□□□ 0.18
DDX55-204ENST00000536079 RLIMQ9NVW2 624 aa16.15■□□□□ 0.18
DDX55-204ENST00000536079 GMPR2Q9P2T1 348 aaKnown RBP16.15■□□□□ 0.18
DDX55-204ENST00000536079 SUCOQ9UBS9 1254 aaKnown RBP16.15■□□□□ 0.18
DDX55-204ENST00000536079 KIAA1549Q9HCM3 1950 aa16.15■□□□□ 0.18
DDX55-204ENST00000536079 BBIP1A8MTZ0 92 aa16.14■□□□□ 0.17
DDX55-204ENST00000536079 EVPLLA8MZ36 301 aa16.14■□□□□ 0.17
DDX55-204ENST00000536079 H3BML4 177 aa16.14■□□□□ 0.17
DDX55-204ENST00000536079 AP3D1O14617 1153 aa16.14■□□□□ 0.17
DDX55-204ENST00000536079 GCM2O75603 506 aaPredicted RBP16.14■□□□□ 0.17
DDX55-204ENST00000536079 TOXO94900 526 aa16.14■□□□□ 0.17
DDX55-204ENST00000536079 PGM3O95394 542 aa16.14■□□□□ 0.17
DDX55-204ENST00000536079 CLDN1O95832 211 aa16.14■□□□□ 0.17
DDX55-204ENST00000536079 CPN1P15169 458 aa16.14■□□□□ 0.17
DDX55-204ENST00000536079 SHC1P29353 583 aa16.14■□□□□ 0.17
DDX55-204ENST00000536079 CCR4P51679 360 aa16.14■□□□□ 0.17
DDX55-204ENST00000536079 CLDN20P56880 219 aa16.14■□□□□ 0.17
DDX55-204ENST00000536079 CDK6Q00534 326 aa16.14■□□□□ 0.17
DDX55-204ENST00000536079 PMPCAQ10713 525 aa16.14■□□□□ 0.17
DDX55-204ENST00000536079 QPRTQ15274 297 aa16.14■□□□□ 0.17
DDX55-204ENST00000536079 MAPRE2Q15555 327 aa16.14■□□□□ 0.17
DDX55-204ENST00000536079 MMEL1Q495T6 779 aa16.14■□□□□ 0.17
DDX55-204ENST00000536079 ACSF3Q4G176 576 aaPredicted RBP16.14■□□□□ 0.17
DDX55-204ENST00000536079 MRPL2Q5T653 305 aaKnown RBP16.14■□□□□ 0.17
DDX55-204ENST00000536079 AAGABQ6PD74 315 aa16.14■□□□□ 0.17
DDX55-204ENST00000536079 CLIP4Q8N3C7 705 aa16.14■□□□□ 0.17
DDX55-204ENST00000536079 GTPBP8Q8N3Z3 284 aaPredicted RBP16.14■□□□□ 0.17
DDX55-204ENST00000536079 WDR60Q8WVS4 1066 aa16.14■□□□□ 0.17
DDX55-204ENST00000536079 PSMG3-AS1Q96PY0 264 aa16.14■□□□□ 0.17
DDX55-204ENST00000536079 PIGQQ9BRB3 760 aa16.14■□□□□ 0.17
DDX55-204ENST00000536079 TTYH2Q9BSA4 534 aa16.14■□□□□ 0.17
DDX55-204ENST00000536079 PIF1Q9H611 641 aa16.14■□□□□ 0.17
DDX55-204ENST00000536079 BCL2L10Q9HD36 194 aa16.14■□□□□ 0.17
DDX55-204ENST00000536079 THUMPD1Q9NXG2 353 aaKnown RBP16.14■□□□□ 0.17
DDX55-204ENST00000536079 DNAJB12Q9NXW2 375 aaKnown RBP16.14■□□□□ 0.17
DDX55-204ENST00000536079 UTP20O75691 2785 aaKnown RBP16.13■□□□□ 0.17
DDX55-204ENST00000536079 A0A087WZY1 265 aa16.13■□□□□ 0.17
DDX55-204ENST00000536079 A0A0G2JPF8 293 aa16.13■□□□□ 0.17
DDX55-204ENST00000536079 A1L4Q6 167 aa16.13■□□□□ 0.17
DDX55-204ENST00000536079 C7orf72A4D263 438 aa16.13■□□□□ 0.17
DDX55-204ENST00000536079 FIGNL2A6NMB9 653 aa16.13■□□□□ 0.17
DDX55-204ENST00000536079 HNRNPCL2B2RXH8 293 aa16.13■□□□□ 0.17
DDX55-204ENST00000536079 HNRNPCL3B7ZW38 293 aa16.13■□□□□ 0.17
DDX55-204ENST00000536079 HNRNPCL1O60812 293 aaKnown RBP16.13■□□□□ 0.17
DDX55-204ENST00000536079 SHOX2O60902 331 aaPredicted RBP16.13■□□□□ 0.17
DDX55-204ENST00000536079 WDR1O75083 606 aa16.13■□□□□ 0.17
DDX55-204ENST00000536079 NTN1O95631 604 aa16.13■□□□□ 0.17
DDX55-204ENST00000536079 NUDT14O95848 222 aa16.13■□□□□ 0.17
DDX55-204ENST00000536079 HNRNPCL4P0DMR1 293 aa16.13■□□□□ 0.17
DDX55-204ENST00000536079 NID1P14543 1247 aa16.13■□□□□ 0.17
DDX55-204ENST00000536079 PRKCAP17252 672 aa16.13■□□□□ 0.17
DDX55-204ENST00000536079 ZNF41P51814 821 aaPredicted RBP16.13■□□□□ 0.17
DDX55-204ENST00000536079 SUMO3P55854 103 aaPredicted RBP16.13■□□□□ 0.17
DDX55-204ENST00000536079 EEF1A1P68104 462 aaKnown RBP16.13■□□□□ 0.17
DDX55-204ENST00000536079 SCARB2Q14108 478 aa16.13■□□□□ 0.17
DDX55-204ENST00000536079 NET1Q7Z628 596 aaPredicted RBP16.13■□□□□ 0.17
DDX55-204ENST00000536079 CCDC71Q8IV32 467 aaPredicted RBP16.13■□□□□ 0.17
DDX55-204ENST00000536079 ZZZ3Q8IYH5 903 aa16.13■□□□□ 0.17
DDX55-204ENST00000536079 UBQLNLQ8IYU4 475 aa16.13■□□□□ 0.17
DDX55-204ENST00000536079 OR10A6Q8NH74 314 aa16.13■□□□□ 0.17
DDX55-204ENST00000536079 FBXO27Q8NI29 283 aa16.13■□□□□ 0.17
DDX55-204ENST00000536079 RP9Q8TA86 221 aaKnown RBP16.13■□□□□ 0.17
DDX55-204ENST00000536079 SMPDL3BQ92485 455 aa16.13■□□□□ 0.17
DDX55-204ENST00000536079 TMEM38AQ9H6F2 299 aa16.13■□□□□ 0.17
DDX55-204ENST00000536079 TMEM185BQ9H7F4 350 aa16.13■□□□□ 0.17
DDX55-204ENST00000536079 MRGBPQ9NV56 204 aa16.13■□□□□ 0.17
DDX55-204ENST00000536079 CALML5Q9NZT1 146 aa16.13■□□□□ 0.17
DDX55-204ENST00000536079 ADAM21Q9UKJ8 722 aa16.13■□□□□ 0.17
DDX55-204ENST00000536079 ZNF443Q9Y2A4 671 aaPredicted RBP16.13■□□□□ 0.17
DDX55-204ENST00000536079 SLC35A3Q9Y2D2 325 aa16.13■□□□□ 0.17
DDX55-204ENST00000536079 ARL2BPQ9Y2Y0 163 aa16.13■□□□□ 0.17
DDX55-204ENST00000536079 LRRK2Q5S007 2527 aa16.13■□□□□ 0.17
DDX55-204ENST00000536079 AHRRA9YTQ3 701 aa16.12■□□□□ 0.17
DDX55-204ENST00000536079 AIM2O14862 343 aa16.12■□□□□ 0.17
DDX55-204ENST00000536079 EPPINO95925 133 aa16.12■□□□□ 0.17
DDX55-204ENST00000536079 DBIP07108 87 aaKnown RBP16.12■□□□□ 0.17
DDX55-204ENST00000536079 GKN3PP0CG01 181 aa16.12■□□□□ 0.17
DDX55-204ENST00000536079 ZNF17P17021 662 aa16.12■□□□□ 0.17
DDX55-204ENST00000536079 POU3F2P20265 443 aaPredicted RBP16.12■□□□□ 0.17
DDX55-204ENST00000536079 AQP1P29972 269 aa16.12■□□□□ 0.17
DDX55-204ENST00000536079 RYKP34925 604 aa16.12■□□□□ 0.17
DDX55-204ENST00000536079 ENPP6Q6UWR7 440 aa16.12■□□□□ 0.17
DDX55-204ENST00000536079 B3GNT6Q6ZMB0 384 aa16.12■□□□□ 0.17
DDX55-204ENST00000536079 MRGPRGQ86SM5 289 aa16.12■□□□□ 0.17
DDX55-204ENST00000536079 ADGRE4PQ86SQ3 457 aa16.12■□□□□ 0.17
DDX55-204ENST00000536079 GGNQ86UU5 652 aa16.12■□□□□ 0.17
DDX55-204ENST00000536079 CALHM3Q86XJ0 350 aa16.12■□□□□ 0.17
DDX55-204ENST00000536079 PEX5LQ8IYB4 626 aa16.12■□□□□ 0.17
DDX55-204ENST00000536079 NAXEQ8NCW5 288 aa16.12■□□□□ 0.17
DDX55-204ENST00000536079 BBS10Q8TAM1 723 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms