RNA–Protein interactions for RNA: ENST00000533079.5

CAPN1-223, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 878 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-223ENST00000533079 HEPACAMQ14CZ8 416 aa11.04□□□□□ -0.64
CAPN1-223ENST00000533079 ZNHIT3Q15649 155 aaPredicted RBP11.04□□□□□ -0.64
CAPN1-223ENST00000533079 ZNF239Q16600 458 aaKnown RBP11.04□□□□□ -0.64
CAPN1-223ENST00000533079 C11orf71Q6IPW1 123 aa11.04□□□□□ -0.64
CAPN1-223ENST00000533079 FAM180BQ6P0A1 224 aa11.04□□□□□ -0.64
CAPN1-223ENST00000533079 TRPM8Q7Z2W7 1104 aa11.04□□□□□ -0.64
CAPN1-223ENST00000533079 MEX3DQ86XN8 651 aaKnown RBP11.04□□□□□ -0.64
CAPN1-223ENST00000533079 C10orf107Q8IVU9 208 aa11.04□□□□□ -0.64
CAPN1-223ENST00000533079 FAM168AQ92567 244 aa11.04□□□□□ -0.64
CAPN1-223ENST00000533079 KAT2AQ92830 837 aa11.04□□□□□ -0.64
CAPN1-223ENST00000533079 CPNE4Q96A23 557 aaPredicted RBP11.04□□□□□ -0.64
CAPN1-223ENST00000533079 REXO5Q96IC2 774 aaKnown RBP11.04□□□□□ -0.64
CAPN1-223ENST00000533079 CACNG6Q9BXT2 260 aa11.04□□□□□ -0.64
CAPN1-223ENST00000533079 CBLN4Q9NTU7 201 aa11.04□□□□□ -0.64
CAPN1-223ENST00000533079 CPSF2Q9P2I0 782 aaKnown RBP11.04□□□□□ -0.64
CAPN1-223ENST00000533079 HAO1Q9UJM8 370 aa11.04□□□□□ -0.64
CAPN1-223ENST00000533079 PCTPQ9UKL6 214 aa11.04□□□□□ -0.64
CAPN1-223ENST00000533079 SNX6Q9UNH7 406 aa11.04□□□□□ -0.64
CAPN1-223ENST00000533079 MGAT4BQ9UQ53 548 aa11.04□□□□□ -0.64
CAPN1-223ENST00000533079 VDAC3Q9Y277 283 aa11.04□□□□□ -0.64
CAPN1-223ENST00000533079 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.04□□□□□ -0.64
CAPN1-223ENST00000533079 DPRXA6NFQ7 191 aa11.03□□□□□ -0.64
CAPN1-223ENST00000533079 TTC36A6NLP5 189 aa11.03□□□□□ -0.64
CAPN1-223ENST00000533079 TNFSF11O14788 317 aa11.03□□□□□ -0.64
CAPN1-223ENST00000533079 DCTN3O75935 186 aa11.03□□□□□ -0.64
CAPN1-223ENST00000533079 ANGPTL1O95841 491 aa11.03□□□□□ -0.64
CAPN1-223ENST00000533079 OTCP00480 354 aa11.03□□□□□ -0.64
CAPN1-223ENST00000533079 ATP5F1P24539 256 aaPredicted RBP11.03□□□□□ -0.64
CAPN1-223ENST00000533079 SLC1A6P48664 564 aa11.03□□□□□ -0.64
CAPN1-223ENST00000533079 IRX1P78414 480 aaPredicted RBP11.03□□□□□ -0.64
CAPN1-223ENST00000533079 PPA1Q15181 289 aa11.03□□□□□ -0.64
CAPN1-223ENST00000533079 GALNTL6Q49A17 601 aa11.03□□□□□ -0.64
CAPN1-223ENST00000533079 SH2D4BQ5SQS7 431 aa11.03□□□□□ -0.64
CAPN1-223ENST00000533079 LIPMQ5VYY2 423 aa11.03□□□□□ -0.64
CAPN1-223ENST00000533079 HBMQ6B0K9 141 aa11.03□□□□□ -0.64
CAPN1-223ENST00000533079 MFSD12Q6NUT3 480 aa11.03□□□□□ -0.64
CAPN1-223ENST00000533079 Q6ZT83 130 aa11.03□□□□□ -0.64
CAPN1-223ENST00000533079 CCDC121Q6ZUS5 278 aa11.03□□□□□ -0.64
CAPN1-223ENST00000533079 MARCH3Q86UD3 253 aa11.03□□□□□ -0.64
CAPN1-223ENST00000533079 SLC22A9Q8IVM8 553 aa11.03□□□□□ -0.64
CAPN1-223ENST00000533079 KIRREL3Q8IZU9 778 aa11.03□□□□□ -0.64
CAPN1-223ENST00000533079 ZNF619Q8N2I2 560 aa11.03□□□□□ -0.64
CAPN1-223ENST00000533079 C1orf52Q8N6N3 182 aaKnown RBP11.03□□□□□ -0.64
CAPN1-223ENST00000533079 ZNF525Q8N782 197 aa11.03□□□□□ -0.64
CAPN1-223ENST00000533079 PTGR2Q8N8N7 351 aaPredicted RBP11.03□□□□□ -0.64
CAPN1-223ENST00000533079 OR7G2Q8NG99 324 aa11.03□□□□□ -0.64
CAPN1-223ENST00000533079 OR4F6Q8NGB9 312 aa11.03□□□□□ -0.64
CAPN1-223ENST00000533079 ACTRT2Q8TDY3 377 aa11.03□□□□□ -0.64
CAPN1-223ENST00000533079 C10orf105Q8TEF2 133 aa11.03□□□□□ -0.64
CAPN1-223ENST00000533079 C10orf82Q8WW14 230 aa11.03□□□□□ -0.64
CAPN1-223ENST00000533079 SELENOMQ8WWX9 145 aa11.03□□□□□ -0.64
CAPN1-223ENST00000533079 HBEGFQ99075 208 aa11.03□□□□□ -0.64
CAPN1-223ENST00000533079 MECRQ9BV79 373 aa11.03□□□□□ -0.64
CAPN1-223ENST00000533079 RTN4RQ9BZR6 473 aa11.03□□□□□ -0.64
CAPN1-223ENST00000533079 C3orf14Q9HBI5 128 aa11.03□□□□□ -0.64
CAPN1-223ENST00000533079 TIGARQ9NQ88 270 aa11.03□□□□□ -0.64
CAPN1-223ENST00000533079 FLRT3Q9NZU0 649 aa11.03□□□□□ -0.64
CAPN1-223ENST00000533079 MEGF8Q7Z7M0 2845 aa11.03□□□□□ -0.64
CAPN1-223ENST00000533079 SHISA8B8ZZ34 492 aa11.02□□□□□ -0.65
CAPN1-223ENST00000533079 SPRY1O43609 319 aaPredicted RBP11.02□□□□□ -0.65
CAPN1-223ENST00000533079 NPHS1O60500 1241 aa11.02□□□□□ -0.65
CAPN1-223ENST00000533079 KCNH1O95259 989 aa11.02□□□□□ -0.65
CAPN1-223ENST00000533079 PSMG1O95456 288 aa11.02□□□□□ -0.65
CAPN1-223ENST00000533079 PDYNP01213 254 aa11.02□□□□□ -0.65
CAPN1-223ENST00000533079 NGFRP08138 427 aa11.02□□□□□ -0.65
CAPN1-223ENST00000533079 IL3P08700 152 aa11.02□□□□□ -0.65
CAPN1-223ENST00000533079 IFI6P09912 130 aa11.02□□□□□ -0.65
CAPN1-223ENST00000533079 BMP4P12644 408 aa11.02□□□□□ -0.65
CAPN1-223ENST00000533079 USF1P22415 310 aaPredicted RBP11.02□□□□□ -0.65
CAPN1-223ENST00000533079 PSMA4P25789 261 aaKnown RBP11.02□□□□□ -0.65
CAPN1-223ENST00000533079 ELK4P28324 431 aa11.02□□□□□ -0.65
CAPN1-223ENST00000533079 TTKP33981 857 aa11.02□□□□□ -0.65
CAPN1-223ENST00000533079 ZNF41P51814 821 aaPredicted RBP11.02□□□□□ -0.65
CAPN1-223ENST00000533079 C21orf58P58505 322 aa11.02□□□□□ -0.65
CAPN1-223ENST00000533079 ABCE1P61221 599 aaKnown RBP11.02□□□□□ -0.65
CAPN1-223ENST00000533079 LSM11P83369 360 aaKnown RBP eCLIP11.02□□□□□ -0.65
CAPN1-223ENST00000533079 CSTF3Q12996 717 aaKnown RBP11.02□□□□□ -0.65
CAPN1-223ENST00000533079 RAB35Q15286 201 aa11.02□□□□□ -0.65
CAPN1-223ENST00000533079 SPIN4Q56A73 249 aa11.02□□□□□ -0.65
CAPN1-223ENST00000533079 TECRLQ5HYJ1 363 aa11.02□□□□□ -0.65
CAPN1-223ENST00000533079 TIMM23BQ5SRD1 257 aa11.02□□□□□ -0.65
CAPN1-223ENST00000533079 FAM120AOSQ5T036 256 aa11.02□□□□□ -0.65
CAPN1-223ENST00000533079 BHLHA15Q7RTS1 189 aaPredicted RBP11.02□□□□□ -0.65
CAPN1-223ENST00000533079 ATG4DQ86TL0 474 aaPredicted RBP11.02□□□□□ -0.65
CAPN1-223ENST00000533079 P2RY8Q86VZ1 359 aa11.02□□□□□ -0.65
CAPN1-223ENST00000533079 RFLNBQ8N5W9 214 aa11.02□□□□□ -0.65
CAPN1-223ENST00000533079 EXOSC8Q96B26 276 aaKnown RBP11.02□□□□□ -0.65
CAPN1-223ENST00000533079 MUCL1Q96DR8 90 aa11.02□□□□□ -0.65
CAPN1-223ENST00000533079 KLHL15Q96M94 604 aa11.02□□□□□ -0.65
CAPN1-223ENST00000533079 RNF145Q96MT1 663 aa11.02□□□□□ -0.65
CAPN1-223ENST00000533079 SLC35C2Q9NQQ7 365 aa11.02□□□□□ -0.65
CAPN1-223ENST00000533079 VPS29Q9UBQ0 182 aa11.02□□□□□ -0.65
CAPN1-223ENST00000533079 ROS1P08922 2347 aa11.02□□□□□ -0.65
CAPN1-223ENST00000533079 A0A0J9YW62 118 aa11.01□□□□□ -0.65
CAPN1-223ENST00000533079 GJE1A6NN92 205 aa11.01□□□□□ -0.65
CAPN1-223ENST00000533079 ALG1L2C9J202 215 aa11.01□□□□□ -0.65
CAPN1-223ENST00000533079 NDUFS8O00217 210 aa11.01□□□□□ -0.65
CAPN1-223ENST00000533079 ABCD4O14678 606 aa11.01□□□□□ -0.65
CAPN1-223ENST00000533079 PCDH7O60245 1069 aa11.01□□□□□ -0.65
CAPN1-223ENST00000533079 RAMP1O60894 148 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms