RNA–Protein interactions for RNA: ENST00000531118.5

CD44-232, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 877 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-232ENST00000531118 STEAP4Q687X5 459 aa7.17□□□□□ -1.26
CD44-232ENST00000531118 UGT2A3Q6UWM9 527 aa7.17□□□□□ -1.26
CD44-232ENST00000531118 PPIL6Q8IXY8 311 aa7.17□□□□□ -1.26
CD44-232ENST00000531118 TOR1AIP2Q8NFQ8 470 aa7.17□□□□□ -1.26
CD44-232ENST00000531118 FAM110BQ8TC76 370 aa7.17□□□□□ -1.26
CD44-232ENST00000531118 TMEM186Q96B77 213 aa7.17□□□□□ -1.26
CD44-232ENST00000531118 ZNF681Q96N22 645 aa7.17□□□□□ -1.26
CD44-232ENST00000531118 ZNF300Q96RE9 604 aaPredicted RBP7.17□□□□□ -1.26
CD44-232ENST00000531118 SERPINI1Q99574 410 aa7.17□□□□□ -1.26
CD44-232ENST00000531118 DESI2Q9BSY9 194 aa7.17□□□□□ -1.26
CD44-232ENST00000531118 NAT9Q9BTE0 207 aa7.17□□□□□ -1.26
CD44-232ENST00000531118 MRPL1Q9BYD6 325 aaKnown RBP7.17□□□□□ -1.26
CD44-232ENST00000531118 TBL1XR1Q9BZK7 514 aa7.17□□□□□ -1.26
CD44-232ENST00000531118 KCNF1Q9H3M0 494 aa7.17□□□□□ -1.26
CD44-232ENST00000531118 ANKZF1Q9H8Y5 726 aa7.17□□□□□ -1.26
CD44-232ENST00000531118 LPAR2Q9HBW0 351 aa7.17□□□□□ -1.26
CD44-232ENST00000531118 MED17Q9NVC6 651 aa7.17□□□□□ -1.26
CD44-232ENST00000531118 HIF1ANQ9NWT6 349 aa7.17□□□□□ -1.26
CD44-232ENST00000531118 NTMQ9P121 344 aa7.17□□□□□ -1.26
CD44-232ENST00000531118 KLHL9Q9P2J3 617 aa7.17□□□□□ -1.26
CD44-232ENST00000531118 ADAM29Q9UKF5 820 aa7.17□□□□□ -1.26
CD44-232ENST00000531118 CHMP2BQ9UQN3 213 aa7.17□□□□□ -1.26
CD44-232ENST00000531118 GRIP1Q9Y3R0 1128 aa7.17□□□□□ -1.26
CD44-232ENST00000531118 IGHV3-15A0A0B4J1V0 119 aa7.16□□□□□ -1.26
CD44-232ENST00000531118 UBXN8O00124 270 aa7.16□□□□□ -1.26
CD44-232ENST00000531118 FOXE1O00358 373 aaPredicted RBP7.16□□□□□ -1.26
CD44-232ENST00000531118 PRKD3O94806 890 aa7.16□□□□□ -1.26
CD44-232ENST00000531118 UTS2O95399 124 aa7.16□□□□□ -1.26
CD44-232ENST00000531118 MSMBP08118 114 aa7.16□□□□□ -1.26
CD44-232ENST00000531118 DAOP14920 347 aa7.16□□□□□ -1.26
CD44-232ENST00000531118 RFX3P48380 749 aa7.16□□□□□ -1.26
CD44-232ENST00000531118 ALDH9A1P49189 494 aa7.16□□□□□ -1.26
CD44-232ENST00000531118 PPOXP50336 477 aa7.16□□□□□ -1.26
CD44-232ENST00000531118 SLC12A2P55011 1212 aa7.16□□□□□ -1.26
CD44-232ENST00000531118 CARD18P57730 90 aa7.16□□□□□ -1.26
CD44-232ENST00000531118 PRR5P85299 388 aa7.16□□□□□ -1.26
CD44-232ENST00000531118 SLC25A3Q00325 362 aa7.16□□□□□ -1.26
CD44-232ENST00000531118 C17orf67Q0P5P2 114 aa7.16□□□□□ -1.26
CD44-232ENST00000531118 DECR1Q16698 335 aa7.16□□□□□ -1.26
CD44-232ENST00000531118 CCNYL2Q5T2Q4 361 aa7.16□□□□□ -1.26
CD44-232ENST00000531118 APOOLQ6UXV4 268 aa7.16□□□□□ -1.26
CD44-232ENST00000531118 PAGE2Q7Z2X7 111 aa7.16□□□□□ -1.26
CD44-232ENST00000531118 COMMD6Q7Z4G1 85 aa7.16□□□□□ -1.26
CD44-232ENST00000531118 TRABD2AQ86V40 505 aa7.16□□□□□ -1.26
CD44-232ENST00000531118 RELL1Q8IUW5 271 aa7.16□□□□□ -1.26
CD44-232ENST00000531118 TEX9Q8N6V9 391 aa7.16□□□□□ -1.26
CD44-232ENST00000531118 OR7G2Q8NG99 324 aa7.16□□□□□ -1.26
CD44-232ENST00000531118 FANCD2OSQ96PS1 177 aa7.16□□□□□ -1.26
CD44-232ENST00000531118 KLHDC3Q9BQ90 382 aa7.16□□□□□ -1.26
CD44-232ENST00000531118 CDC42EP4Q9H3Q1 356 aaKnown RBP7.16□□□□□ -1.26
CD44-232ENST00000531118 RHOJQ9H4E5 214 aa7.16□□□□□ -1.26
CD44-232ENST00000531118 ACSS3Q9H6R3 686 aa7.16□□□□□ -1.26
CD44-232ENST00000531118 CAB39LQ9H9S4 337 aa7.16□□□□□ -1.26
CD44-232ENST00000531118 PPIAL4AQ9Y536 164 aa7.16□□□□□ -1.26
CD44-232ENST00000531118 PCDHB14Q9Y5E9 798 aa7.16□□□□□ -1.26
CD44-232ENST00000531118 ZNF780BQ9Y6R6 833 aa7.16□□□□□ -1.26
CD44-232ENST00000531118 DYNC2H1Q8NCM8 4307 aaKnown RBP7.15□□□□□ -1.26
CD44-232ENST00000531118 LOC105371242A0A075B767 164 aa7.15□□□□□ -1.26
CD44-232ENST00000531118 CIB4A0PJX0 185 aa7.15□□□□□ -1.26
CD44-232ENST00000531118 PLOD3O60568 738 aa7.15□□□□□ -1.26
CD44-232ENST00000531118 UGDHO60701 494 aa7.15□□□□□ -1.26
CD44-232ENST00000531118 KERAO60938 352 aa7.15□□□□□ -1.26
CD44-232ENST00000531118 COQ9O75208 318 aa7.15□□□□□ -1.26
CD44-232ENST00000531118 GUCY1B2O75343 617 aa7.15□□□□□ -1.26
CD44-232ENST00000531118 PNPP00491 289 aa7.15□□□□□ -1.26
CD44-232ENST00000531118 IGHV3-9P01782 118 aa7.15□□□□□ -1.26
CD44-232ENST00000531118 ENPP1P22413 925 aa7.15□□□□□ -1.26
CD44-232ENST00000531118 IDH3GP51553 393 aaPredicted RBP7.15□□□□□ -1.26
CD44-232ENST00000531118 MANFP55145 182 aaKnown RBP7.15□□□□□ -1.26
CD44-232ENST00000531118 RIN1Q13671 783 aa7.15□□□□□ -1.26
CD44-232ENST00000531118 GRAMD1BQ3KR37 738 aa7.15□□□□□ -1.26
CD44-232ENST00000531118 CYP27C1Q4G0S4 372 aa7.15□□□□□ -1.26
CD44-232ENST00000531118 CPTPQ5TA50 214 aa7.15□□□□□ -1.26
CD44-232ENST00000531118 CDPF1Q6NVV7 123 aa7.15□□□□□ -1.26
CD44-232ENST00000531118 C1QL2Q7Z5L3 287 aa7.15□□□□□ -1.26
CD44-232ENST00000531118 FAM9CQ8IZT9 166 aa7.15□□□□□ -1.26
CD44-232ENST00000531118 LILRA2Q8N149 483 aa7.15□□□□□ -1.26
CD44-232ENST00000531118 SLC43A2Q8N370 569 aa7.15□□□□□ -1.26
CD44-232ENST00000531118 METTL4Q8N3J2 472 aa7.15□□□□□ -1.26
CD44-232ENST00000531118 BPIFB2Q8N4F0 458 aa7.15□□□□□ -1.26
CD44-232ENST00000531118 CDYL2Q8N8U2 506 aa7.15□□□□□ -1.26
CD44-232ENST00000531118 GATSQ8NAP1 163 aa7.15□□□□□ -1.26
CD44-232ENST00000531118 PUM2Q8TB72 1066 aaKnown RBP eCLIP7.15□□□□□ -1.26
CD44-232ENST00000531118 ZFP90Q8TF47 636 aa7.15□□□□□ -1.26
CD44-232ENST00000531118 MRRFQ96E11 262 aaKnown RBP7.15□□□□□ -1.26
CD44-232ENST00000531118 LRRC37BQ96QE4 947 aa7.15□□□□□ -1.26
CD44-232ENST00000531118 ATOH8Q96SQ7 321 aa7.15□□□□□ -1.26
CD44-232ENST00000531118 MCMBPQ9BTE3 642 aa7.15□□□□□ -1.26
CD44-232ENST00000531118 FAIM2Q9BWQ8 316 aa7.15□□□□□ -1.26
CD44-232ENST00000531118 C1QTNF6Q9BXI9 259 aa7.15□□□□□ -1.26
CD44-232ENST00000531118 ALG9Q9H6U8 611 aa7.15□□□□□ -1.26
CD44-232ENST00000531118 C7orf69Q9H7B7 122 aa7.15□□□□□ -1.26
CD44-232ENST00000531118 Q9N2J8 555 aa7.15□□□□□ -1.26
CD44-232ENST00000531118 TIGARQ9NQ88 270 aa7.15□□□□□ -1.26
CD44-232ENST00000531118 SENP1Q9P0U3 644 aa7.15□□□□□ -1.26
CD44-232ENST00000531118 MCM8Q9UJA3 840 aa7.15□□□□□ -1.26
CD44-232ENST00000531118 UTS2RQ9UKP6 389 aa7.15□□□□□ -1.26
CD44-232ENST00000531118 ANGPTL3Q9Y5C1 460 aa7.15□□□□□ -1.26
CD44-232ENST00000531118 CCT8L1PA6NM43 557 aa7.14□□□□□ -1.27
CD44-232ENST00000531118 B9A039 149 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms