RNA–Protein interactions for RNA: ENST00000529986.5

CTNND1-223, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,727 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-223ENST00000529986 C6orf132Q5T0Z8 1188 aa7.18□□□□□ -1.26
CTNND1-223ENST00000529986 LRIF1Q5T3J3 769 aa7.18□□□□□ -1.26
CTNND1-223ENST00000529986 PGM2L1Q6PCE3 622 aa7.18□□□□□ -1.26
CTNND1-223ENST00000529986 PODNL1Q6PEZ8 512 aa7.18□□□□□ -1.26
CTNND1-223ENST00000529986 BCDIN3DQ7Z5W3 292 aaKnown RBP7.18□□□□□ -1.26
CTNND1-223ENST00000529986 ALDH16A1Q8IZ83 802 aa7.18□□□□□ -1.26
CTNND1-223ENST00000529986 RCBTB1Q8NDN9 531 aa7.18□□□□□ -1.26
CTNND1-223ENST00000529986 OR2A12Q8NGT7 310 aa7.18□□□□□ -1.26
CTNND1-223ENST00000529986 CD200R1Q8TD46 325 aa7.18□□□□□ -1.26
CTNND1-223ENST00000529986 GPR148Q8TDV2 347 aa7.18□□□□□ -1.26
CTNND1-223ENST00000529986 TEPSINQ96N21 525 aa7.18□□□□□ -1.26
CTNND1-223ENST00000529986 ZNF681Q96N22 645 aa7.18□□□□□ -1.26
CTNND1-223ENST00000529986 SLC6A16Q9GZN6 736 aa7.18□□□□□ -1.26
CTNND1-223ENST00000529986 TUBB1Q9H4B7 451 aa7.18□□□□□ -1.26
CTNND1-223ENST00000529986 CWH43Q9H720 699 aa7.18□□□□□ -1.26
CTNND1-223ENST00000529986 PTGES2Q9H7Z7 377 aa7.18□□□□□ -1.26
CTNND1-223ENST00000529986 C2orf42Q9NWW7 574 aa7.18□□□□□ -1.26
CTNND1-223ENST00000529986 PPP4R1LQ9P1A2 415 aa7.18□□□□□ -1.26
CTNND1-223ENST00000529986 BTNL2Q9UIR0 455 aa7.18□□□□□ -1.26
CTNND1-223ENST00000529986 C4BP0C0L5 1744 aa7.18□□□□□ -1.26
CTNND1-223ENST00000529986 MDFIC2A0A1B0GVS7 189 aa7.18□□□□□ -1.26
CTNND1-223ENST00000529986 UNCXA6NJT0 531 aa7.18□□□□□ -1.26
CTNND1-223ENST00000529986 LEFTY2O00292 366 aa7.18□□□□□ -1.26
CTNND1-223ENST00000529986 PEX14O75381 377 aa7.18□□□□□ -1.26
CTNND1-223ENST00000529986 IL1RNP18510 177 aa7.18□□□□□ -1.26
CTNND1-223ENST00000529986 GABRR1P24046 479 aa7.18□□□□□ -1.26
CTNND1-223ENST00000529986 GDI1P31150 447 aa7.18□□□□□ -1.26
CTNND1-223ENST00000529986 GHRHRQ02643 423 aa7.18□□□□□ -1.26
CTNND1-223ENST00000529986 GSTM4Q03013 218 aa7.18□□□□□ -1.26
CTNND1-223ENST00000529986 SCGB2A2Q13296 93 aa7.18□□□□□ -1.26
CTNND1-223ENST00000529986 SLC14A1Q13336 389 aa7.18□□□□□ -1.26
CTNND1-223ENST00000529986 HTR4Q13639 388 aa7.18□□□□□ -1.26
CTNND1-223ENST00000529986 LACC1Q8IV20 430 aa7.18□□□□□ -1.26
CTNND1-223ENST00000529986 KLHDC8AQ8IYD2 350 aa7.18□□□□□ -1.26
CTNND1-223ENST00000529986 MACROD1Q9BQ69 325 aa7.18□□□□□ -1.26
CTNND1-223ENST00000529986 ACPTQ9BZG2 426 aa7.18□□□□□ -1.26
CTNND1-223ENST00000529986 HAPLN2Q9GZV7 340 aa7.18□□□□□ -1.26
CTNND1-223ENST00000529986 TSPAN10Q9H1Z9 355 aaPredicted RBP7.18□□□□□ -1.26
CTNND1-223ENST00000529986 MED20Q9H944 212 aa7.18□□□□□ -1.26
CTNND1-223ENST00000529986 RBFOX1Q9NWB1 397 aaKnown RBP7.18□□□□□ -1.26
CTNND1-223ENST00000529986 LTBP3Q9NS15 1303 aa7.18□□□□□ -1.26
CTNND1-223ENST00000529986 A0A0U1RQF3 1178 aa7.18□□□□□ -1.26
CTNND1-223ENST00000529986 GABRR3A8MPY1 467 aa7.18□□□□□ -1.26
CTNND1-223ENST00000529986 SHOXO15266 292 aa7.18□□□□□ -1.26
CTNND1-223ENST00000529986 ITGB2P05107 769 aa7.18□□□□□ -1.26
CTNND1-223ENST00000529986 GDNFP39905 211 aa7.18□□□□□ -1.26
CTNND1-223ENST00000529986 MC3RP41968 323 aa7.18□□□□□ -1.26
CTNND1-223ENST00000529986 CLDN6P56747 220 aa7.18□□□□□ -1.26
CTNND1-223ENST00000529986 SPOCK1Q08629 439 aa7.18□□□□□ -1.26
CTNND1-223ENST00000529986 CCDC71Q8IV32 467 aaPredicted RBP7.18□□□□□ -1.26
CTNND1-223ENST00000529986 BPIFB2Q8N4F0 458 aa7.18□□□□□ -1.26
CTNND1-223ENST00000529986 DNAJC22Q8N4W6 341 aa7.18□□□□□ -1.26
CTNND1-223ENST00000529986 PXT1Q8NFP0 134 aa7.18□□□□□ -1.26
CTNND1-223ENST00000529986 OR9A2Q8NGT5 310 aa7.18□□□□□ -1.26
CTNND1-223ENST00000529986 SLC2A12Q8TD20 617 aa7.18□□□□□ -1.26
CTNND1-223ENST00000529986 LMX1AQ8TE12 382 aa7.18□□□□□ -1.26
CTNND1-223ENST00000529986 TMEM234Q8WY98 164 aa7.18□□□□□ -1.26
CTNND1-223ENST00000529986 RTP4Q96DX8 246 aa7.18□□□□□ -1.26
CTNND1-223ENST00000529986 RNF167Q9H6Y7 350 aa7.18□□□□□ -1.26
CTNND1-223ENST00000529986 TDP1Q9NUW8 608 aa7.18□□□□□ -1.26
CTNND1-223ENST00000529986 PLEKHJ1Q9NW61 149 aa7.18□□□□□ -1.26
CTNND1-223ENST00000529986 CNOT2Q9NZN8 540 aaKnown RBP7.18□□□□□ -1.26
CTNND1-223ENST00000529986 VSX1Q9NZR4 365 aaPredicted RBP7.18□□□□□ -1.26
CTNND1-223ENST00000529986 PURGQ9UJV8 347 aaKnown RBP7.18□□□□□ -1.26
CTNND1-223ENST00000529986 PCDHGA2Q9Y5H1 932 aa7.18□□□□□ -1.26
CTNND1-223ENST00000529986 NFKBIEO00221 500 aa7.18□□□□□ -1.26
CTNND1-223ENST00000529986 GAPDHSO14556 408 aaPredicted RBP7.18□□□□□ -1.26
CTNND1-223ENST00000529986 GPR39O43194 453 aa7.18□□□□□ -1.26
CTNND1-223ENST00000529986 OMGP23515 440 aa7.18□□□□□ -1.26
CTNND1-223ENST00000529986 EIF2DP41214 584 aaKnown RBP7.18□□□□□ -1.26
CTNND1-223ENST00000529986 CX3CR1P49238 355 aa7.18□□□□□ -1.26
CTNND1-223ENST00000529986 SLC11A1P49279 550 aa7.18□□□□□ -1.26
CTNND1-223ENST00000529986 ZNF84P51523 738 aa7.18□□□□□ -1.26
CTNND1-223ENST00000529986 SHC2P98077 582 aa7.18□□□□□ -1.26
CTNND1-223ENST00000529986 LTBQ06643 244 aa7.18□□□□□ -1.26
CTNND1-223ENST00000529986 DHCR24Q15392 516 aa7.18□□□□□ -1.26
CTNND1-223ENST00000529986 SMAD2Q15796 467 aaKnown RBP7.18□□□□□ -1.26
CTNND1-223ENST00000529986 OR52H1Q8NGJ2 320 aa7.18□□□□□ -1.26
CTNND1-223ENST00000529986 OR56B4Q8NH76 319 aa7.18□□□□□ -1.26
CTNND1-223ENST00000529986 UBE2FQ969M7 185 aa7.18□□□□□ -1.26
CTNND1-223ENST00000529986 RADILQ96JH8 1075 aa7.18□□□□□ -1.26
CTNND1-223ENST00000529986 SNX18Q96RF0 628 aa7.18□□□□□ -1.26
CTNND1-223ENST00000529986 PAAF1Q9BRP4 392 aa7.18□□□□□ -1.26
CTNND1-223ENST00000529986 MTHFD2LQ9H903 347 aaPredicted RBP7.18□□□□□ -1.26
CTNND1-223ENST00000529986 MRPL22Q9NWU5 206 aaKnown RBP7.18□□□□□ -1.26
CTNND1-223ENST00000529986 BABAM2Q9NXR7 383 aa7.18□□□□□ -1.26
CTNND1-223ENST00000529986 PRODH2Q9UF12 536 aa7.18□□□□□ -1.26
CTNND1-223ENST00000529986 C10orf71Q711Q0 1435 aa7.18□□□□□ -1.26
CTNND1-223ENST00000529986 A0A1B0GTW7 788 aa7.17□□□□□ -1.26
CTNND1-223ENST00000529986 SOCS5O75159 536 aa7.17□□□□□ -1.26
CTNND1-223ENST00000529986 CLEC3AO75596 197 aa7.17□□□□□ -1.26
CTNND1-223ENST00000529986 NDUFB2O95178 105 aa7.17□□□□□ -1.26
CTNND1-223ENST00000529986 JMJD7P0C870 316 aa7.17□□□□□ -1.26
CTNND1-223ENST00000529986 RBMS1P29558 406 aaKnown RBP7.17□□□□□ -1.26
CTNND1-223ENST00000529986 TAS2R31P59538 309 aa7.17□□□□□ -1.26
CTNND1-223ENST00000529986 VEZF1Q14119 521 aa7.17□□□□□ -1.26
CTNND1-223ENST00000529986 GRM7Q14831 915 aa7.17□□□□□ -1.26
CTNND1-223ENST00000529986 SLC22A25Q6T423 547 aa7.17□□□□□ -1.26
CTNND1-223ENST00000529986 RANBP10Q6VN20 620 aa7.17□□□□□ -1.26
CTNND1-223ENST00000529986 SPRED1Q7Z699 444 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms