RNA–Protein interactions for RNA: ENST00000529553.1

AMBRA1-207, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 3

Gene AMBRA1, Length 586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-207ENST00000529553 B4GALNT2Q8NHY0 566 aa10.17□□□□□ -0.78
AMBRA1-207ENST00000529553 FBF1Q8TES7 1133 aa10.17□□□□□ -0.78
AMBRA1-207ENST00000529553 BBS4Q96RK4 519 aa10.17□□□□□ -0.78
AMBRA1-207ENST00000529553 VRK1Q99986 396 aaPredicted RBP10.17□□□□□ -0.78
AMBRA1-207ENST00000529553 TAS2R16Q9NYV7 291 aa10.17□□□□□ -0.78
AMBRA1-207ENST00000529553 GRID1Q9ULK0 1009 aa10.17□□□□□ -0.78
AMBRA1-207ENST00000529553 SNX6Q9UNH7 406 aa10.17□□□□□ -0.78
AMBRA1-207ENST00000529553 PCDHGB1Q9Y5G3 927 aa10.17□□□□□ -0.78
AMBRA1-207ENST00000529553 ACTL7BQ9Y614 415 aa10.17□□□□□ -0.78
AMBRA1-207ENST00000529553 GPC6Q9Y625 555 aaPredicted RBP10.17□□□□□ -0.78
AMBRA1-207ENST00000529553 PRKDCP78527 4128 aaKnown RBP10.16□□□□□ -0.78
AMBRA1-207ENST00000529553 PCNX3Q9H6A9 2034 aa10.16□□□□□ -0.78
AMBRA1-207ENST00000529553 NOTCH1P46531 2555 aa10.16□□□□□ -0.78
AMBRA1-207ENST00000529553 A0A1W2PQD3 144 aa10.16□□□□□ -0.78
AMBRA1-207ENST00000529553 FAM159BA6NKW6 160 aa10.16□□□□□ -0.78
AMBRA1-207ENST00000529553 PDYNP01213 254 aa10.16□□□□□ -0.78
AMBRA1-207ENST00000529553 EDNRAP25101 427 aa10.16□□□□□ -0.78
AMBRA1-207ENST00000529553 TYK2P29597 1187 aa10.16□□□□□ -0.78
AMBRA1-207ENST00000529553 RFX3P48380 749 aa10.16□□□□□ -0.78
AMBRA1-207ENST00000529553 PPOXP50336 477 aa10.16□□□□□ -0.78
AMBRA1-207ENST00000529553 IDH3GP51553 393 aaPredicted RBP10.16□□□□□ -0.78
AMBRA1-207ENST00000529553 TRAF3Q13114 568 aa10.16□□□□□ -0.78
AMBRA1-207ENST00000529553 MLC1Q15049 377 aa10.16□□□□□ -0.78
AMBRA1-207ENST00000529553 PDK3Q15120 406 aa10.16□□□□□ -0.78
AMBRA1-207ENST00000529553 VPS26BQ4G0F5 336 aa10.16□□□□□ -0.78
AMBRA1-207ENST00000529553 SLC46A3Q7Z3Q1 461 aa10.16□□□□□ -0.78
AMBRA1-207ENST00000529553 CMC1Q7Z7K0 106 aa10.16□□□□□ -0.78
AMBRA1-207ENST00000529553 ZBED8Q8IZ13 594 aa10.16□□□□□ -0.78
AMBRA1-207ENST00000529553 CENPLQ8N0S6 344 aaPredicted RBP10.16□□□□□ -0.78
AMBRA1-207ENST00000529553 ZNF786Q8N393 782 aa10.16□□□□□ -0.78
AMBRA1-207ENST00000529553 C17orf78Q8N4C9 275 aa10.16□□□□□ -0.78
AMBRA1-207ENST00000529553 ANKS4BQ8N8V4 417 aa10.16□□□□□ -0.78
AMBRA1-207ENST00000529553 TOR1AIP2Q8NFQ8 470 aa10.16□□□□□ -0.78
AMBRA1-207ENST00000529553 ZFP90Q8TF47 636 aa10.16□□□□□ -0.78
AMBRA1-207ENST00000529553 PYROXD1Q8WU10 500 aa10.16□□□□□ -0.78
AMBRA1-207ENST00000529553 NEU4Q8WWR8 484 aaPredicted RBP10.16□□□□□ -0.78
AMBRA1-207ENST00000529553 SELENOMQ8WWX9 145 aa10.16□□□□□ -0.78
AMBRA1-207ENST00000529553 HOXB13Q92826 284 aaPredicted RBP10.16□□□□□ -0.78
AMBRA1-207ENST00000529553 ELP4Q96EB1 424 aa10.16□□□□□ -0.78
AMBRA1-207ENST00000529553 COQ10BQ9H8M1 238 aa10.16□□□□□ -0.78
AMBRA1-207ENST00000529553 UBQLN4Q9NRR5 601 aa10.16□□□□□ -0.78
AMBRA1-207ENST00000529553 FARSBQ9NSD9 589 aaKnown RBP10.16□□□□□ -0.78
AMBRA1-207ENST00000529553 ASB6Q9NWX5 421 aa10.16□□□□□ -0.78
AMBRA1-207ENST00000529553 TAS2R7Q9NYW3 318 aa10.16□□□□□ -0.78
AMBRA1-207ENST00000529553 USP22Q9UPT9 525 aa10.16□□□□□ -0.78
AMBRA1-207ENST00000529553 GRIP1Q9Y3R0 1128 aa10.16□□□□□ -0.78
AMBRA1-207ENST00000529553 IGKV3D-15A0A087WSY6 115 aa10.15□□□□□ -0.78
AMBRA1-207ENST00000529553 C9JVG2 144 aa10.15□□□□□ -0.78
AMBRA1-207ENST00000529553 PDE5AO76074 875 aa10.15□□□□□ -0.78
AMBRA1-207ENST00000529553 ERCC1P07992 297 aaPredicted RBP10.15□□□□□ -0.78
AMBRA1-207ENST00000529553 HSD3B1P14060 373 aa10.15□□□□□ -0.78
AMBRA1-207ENST00000529553 DAOP14920 347 aa10.15□□□□□ -0.78
AMBRA1-207ENST00000529553 HPGDP15428 266 aa10.15□□□□□ -0.78
AMBRA1-207ENST00000529553 PGCP20142 388 aa10.15□□□□□ -0.78
AMBRA1-207ENST00000529553 HSD3B2P26439 372 aa10.15□□□□□ -0.78
AMBRA1-207ENST00000529553 MAP3K8P41279 467 aa10.15□□□□□ -0.78
AMBRA1-207ENST00000529553 NCBP2P52298 156 aaKnown RBP eCLIP10.15□□□□□ -0.78
AMBRA1-207ENST00000529553 RIN1Q13671 783 aa10.15□□□□□ -0.78
AMBRA1-207ENST00000529553 EFNB3Q15768 340 aa10.15□□□□□ -0.78
AMBRA1-207ENST00000529553 TMEM107Q6UX40 140 aa10.15□□□□□ -0.78
AMBRA1-207ENST00000529553 MTERF4Q7Z6M4 381 aaKnown RBP10.15□□□□□ -0.78
AMBRA1-207ENST00000529553 UBE2J2Q8N2K1 259 aa10.15□□□□□ -0.78
AMBRA1-207ENST00000529553 MMGT1Q8N4V1 131 aa10.15□□□□□ -0.78
AMBRA1-207ENST00000529553 WDR31Q8NA23 367 aa10.15□□□□□ -0.78
AMBRA1-207ENST00000529553 OR4F6Q8NGB9 312 aa10.15□□□□□ -0.78
AMBRA1-207ENST00000529553 FBXO27Q8NI29 283 aa10.15□□□□□ -0.78
AMBRA1-207ENST00000529553 MRPL24Q96A35 216 aaKnown RBP10.15□□□□□ -0.78
AMBRA1-207ENST00000529553 ZNF775Q96BV0 537 aaPredicted RBP10.15□□□□□ -0.78
AMBRA1-207ENST00000529553 SNX18Q96RF0 628 aa10.15□□□□□ -0.78
AMBRA1-207ENST00000529553 SUCNR1Q9BXA5 334 aa10.15□□□□□ -0.78
AMBRA1-207ENST00000529553 C1QTNF6Q9BXI9 259 aa10.15□□□□□ -0.78
AMBRA1-207ENST00000529553 PLK3Q9H4B4 646 aa10.15□□□□□ -0.78
AMBRA1-207ENST00000529553 DDX18Q9NVP1 670 aaKnown RBP10.15□□□□□ -0.78
AMBRA1-207ENST00000529553 EMC3Q9P0I2 261 aa10.15□□□□□ -0.78
AMBRA1-207ENST00000529553 PCTPQ9UKL6 214 aa10.15□□□□□ -0.78
AMBRA1-207ENST00000529553 TMCO1Q9UM00 188 aa10.15□□□□□ -0.78
AMBRA1-207ENST00000529553 AMDHD2Q9Y303 409 aa10.15□□□□□ -0.78
AMBRA1-207ENST00000529553 IGHV3-15A0A0B4J1V0 119 aa10.14□□□□□ -0.79
AMBRA1-207ENST00000529553 A0A1W2PR80 420 aa10.14□□□□□ -0.79
AMBRA1-207ENST00000529553 GXYLT2A0PJZ3 443 aa10.14□□□□□ -0.79
AMBRA1-207ENST00000529553 STX16-NPEPL1H3BU86 382 aa10.14□□□□□ -0.79
AMBRA1-207ENST00000529553 SCDO00767 359 aa10.14□□□□□ -0.79
AMBRA1-207ENST00000529553 STX16O14662 325 aa10.14□□□□□ -0.79
AMBRA1-207ENST00000529553 TP73O15350 636 aa10.14□□□□□ -0.79
AMBRA1-207ENST00000529553 SEC31AO94979 1220 aaKnown RBP10.14□□□□□ -0.79
AMBRA1-207ENST00000529553 NKX2-2O95096 273 aa10.14□□□□□ -0.79
AMBRA1-207ENST00000529553 KLHL2O95198 593 aa10.14□□□□□ -0.79
AMBRA1-207ENST00000529553 HSPA4LO95757 839 aa10.14□□□□□ -0.79
AMBRA1-207ENST00000529553 GSTA2P09210 222 aa10.14□□□□□ -0.79
AMBRA1-207ENST00000529553 DDX5P17844 614 aaKnown RBP10.14□□□□□ -0.79
AMBRA1-207ENST00000529553 DDCP20711 480 aa10.14□□□□□ -0.79
AMBRA1-207ENST00000529553 PAX7P23759 505 aa10.14□□□□□ -0.79
AMBRA1-207ENST00000529553 SLC7A1P30825 629 aa10.14□□□□□ -0.79
AMBRA1-207ENST00000529553 SSTR1P30872 391 aa10.14□□□□□ -0.79
AMBRA1-207ENST00000529553 PRIM2P49643 509 aa10.14□□□□□ -0.79
AMBRA1-207ENST00000529553 FOXF1Q12946 379 aa10.14□□□□□ -0.79
AMBRA1-207ENST00000529553 TRADDQ15628 312 aa10.14□□□□□ -0.79
AMBRA1-207ENST00000529553 KLC3Q6P597 504 aa10.14□□□□□ -0.79
AMBRA1-207ENST00000529553 GALNT18Q6P9A2 607 aa10.14□□□□□ -0.79
AMBRA1-207ENST00000529553 SHQ1Q6PI26 577 aaKnown RBP10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms