RNA–Protein interactions for RNA: ENST00000529046.5

CSDE1-212, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-212ENST00000529046 TLCD2A6NGC4 264 aa4.13□□□□□ -1.75
CSDE1-212ENST00000529046 HACD1B0YJ81 288 aa4.13□□□□□ -1.75
CSDE1-212ENST00000529046 CEACAM4O75871 244 aa4.13□□□□□ -1.75
CSDE1-212ENST00000529046 GPIP06744 558 aa4.13□□□□□ -1.75
CSDE1-212ENST00000529046 TPM3P06753 285 aa4.13□□□□□ -1.75
CSDE1-212ENST00000529046 HLA-DPA1P20036 260 aa4.13□□□□□ -1.75
CSDE1-212ENST00000529046 F8A1P23610 371 aa4.13□□□□□ -1.75
CSDE1-212ENST00000529046 EEF1B2P24534 225 aaKnown RBP4.13□□□□□ -1.75
CSDE1-212ENST00000529046 PTAFRP25105 342 aa4.13□□□□□ -1.75
CSDE1-212ENST00000529046 PSMA3P25788 255 aa4.13□□□□□ -1.75
CSDE1-212ENST00000529046 PTPN4P29074 926 aa4.13□□□□□ -1.75
CSDE1-212ENST00000529046 CASP14P31944 242 aa4.13□□□□□ -1.75
CSDE1-212ENST00000529046 DLSTP36957 453 aa4.13□□□□□ -1.75
CSDE1-212ENST00000529046 SPAM1P38567 509 aa4.13□□□□□ -1.75
CSDE1-212ENST00000529046 SSR1P43307 286 aaKnown RBP4.13□□□□□ -1.75
CSDE1-212ENST00000529046 CD151P48509 253 aa4.13□□□□□ -1.75
CSDE1-212ENST00000529046 GFERP55789 205 aa4.13□□□□□ -1.75
CSDE1-212ENST00000529046 GSDMDP57764 484 aa4.13□□□□□ -1.75
CSDE1-212ENST00000529046 HERV-K104P61576 105 aa4.13□□□□□ -1.75
CSDE1-212ENST00000529046 XRCC4Q13426 336 aa4.13□□□□□ -1.75
CSDE1-212ENST00000529046 TUBB2AQ13885 445 aa4.13□□□□□ -1.75
CSDE1-212ENST00000529046 TFDP2Q14188 446 aa4.13□□□□□ -1.75
CSDE1-212ENST00000529046 SLC1A5Q15758 541 aa4.13□□□□□ -1.75
CSDE1-212ENST00000529046 ODF4Q2M2E3 257 aa4.13□□□□□ -1.75
CSDE1-212ENST00000529046 DEFB109BQ30KR1 87 aa4.13□□□□□ -1.75
CSDE1-212ENST00000529046 C6orf136Q5SQH8 315 aa4.13□□□□□ -1.75
CSDE1-212ENST00000529046 C11orf63Q6NUN7 778 aa4.13□□□□□ -1.75
CSDE1-212ENST00000529046 KDELC1Q6UW63 502 aa4.13□□□□□ -1.75
CSDE1-212ENST00000529046 SYVN1Q86TM6 617 aa4.13□□□□□ -1.75
CSDE1-212ENST00000529046 AMZ2Q86W34 360 aa4.13□□□□□ -1.75
CSDE1-212ENST00000529046 ZNF611Q8N823 705 aa4.13□□□□□ -1.75
CSDE1-212ENST00000529046 OR2L2Q8NH16 312 aa4.13□□□□□ -1.75
CSDE1-212ENST00000529046 HEXDCQ8WVB3 486 aa4.13□□□□□ -1.75
CSDE1-212ENST00000529046 TFB1MQ8WVM0 346 aaKnown RBP4.13□□□□□ -1.75
CSDE1-212ENST00000529046 P3H4Q92791 437 aa4.13□□□□□ -1.75
CSDE1-212ENST00000529046 EXT2Q93063 718 aa4.13□□□□□ -1.75
CSDE1-212ENST00000529046 CXorf40BQ96DE9 158 aa4.13□□□□□ -1.75
CSDE1-212ENST00000529046 GIMAP5Q96F15 307 aa4.13□□□□□ -1.75
CSDE1-212ENST00000529046 TTC25Q96NG3 672 aa4.13□□□□□ -1.75
CSDE1-212ENST00000529046 TGM7Q96PF1 710 aa4.13□□□□□ -1.75
CSDE1-212ENST00000529046 PPP1R2P1Q96PQ5 205 aa4.13□□□□□ -1.75
CSDE1-212ENST00000529046 SMIM14Q96QK8 99 aa4.13□□□□□ -1.75
CSDE1-212ENST00000529046 CTRCQ99895 268 aa4.13□□□□□ -1.75
CSDE1-212ENST00000529046 CCM2Q9BSQ5 444 aa4.13□□□□□ -1.75
CSDE1-212ENST00000529046 ANP32EQ9BTT0 268 aa4.13□□□□□ -1.75
CSDE1-212ENST00000529046 TUBB2BQ9BVA1 445 aa4.13□□□□□ -1.75
CSDE1-212ENST00000529046 TBC1D10AQ9BXI6 508 aa4.13□□□□□ -1.75
CSDE1-212ENST00000529046 OR2B2Q9GZK3 357 aa4.13□□□□□ -1.75
CSDE1-212ENST00000529046 KIR3DX1Q9H7L2 352 aa4.13□□□□□ -1.75
CSDE1-212ENST00000529046 SUDS3Q9H7L9 328 aaPredicted RBP4.13□□□□□ -1.75
CSDE1-212ENST00000529046 ZNHIT6Q9NWK9 470 aaKnown RBP4.13□□□□□ -1.75
CSDE1-212ENST00000529046 RARRES3Q9UL19 164 aa4.13□□□□□ -1.75
CSDE1-212ENST00000529046 FARSAQ9Y285 508 aaKnown RBP4.13□□□□□ -1.75
CSDE1-212ENST00000529046 BTRCQ9Y297 605 aa4.13□□□□□ -1.75
CSDE1-212ENST00000529046 HEY1Q9Y5J3 304 aa4.13□□□□□ -1.75
CSDE1-212ENST00000529046 HEBP2Q9Y5Z4 205 aa4.13□□□□□ -1.75
CSDE1-212ENST00000529046 COLEC10Q9Y6Z7 277 aa4.13□□□□□ -1.75
CSDE1-212ENST00000529046 FLNCQ14315 2725 aa4.12□□□□□ -1.75
CSDE1-212ENST00000529046 IGHV5-51A0A0C4DH38 117 aa4.12□□□□□ -1.75
CSDE1-212ENST00000529046 GLYATL1P3A0A0U1RQE8 302 aa4.12□□□□□ -1.75
CSDE1-212ENST00000529046 LRRD1A4D1F6 860 aa4.12□□□□□ -1.75
CSDE1-212ENST00000529046 MSGN1A6NI15 193 aa4.12□□□□□ -1.75
CSDE1-212ENST00000529046 OR52A4PA6NMU1 304 aa4.12□□□□□ -1.75
CSDE1-212ENST00000529046 PDZK1P1A8MUH7 402 aa4.12□□□□□ -1.75
CSDE1-212ENST00000529046 SLCO1B7G3V0H7 640 aa4.12□□□□□ -1.75
CSDE1-212ENST00000529046 GOLGA6L19H0YKK7 550 aa4.12□□□□□ -1.75
CSDE1-212ENST00000529046 PSTPIP1O43586 416 aa4.12□□□□□ -1.75
CSDE1-212ENST00000529046 KLHL41O60662 606 aa4.12□□□□□ -1.75
CSDE1-212ENST00000529046 ZG16O60844 167 aa4.12□□□□□ -1.75
CSDE1-212ENST00000529046 POP7O75817 140 aaKnown RBP4.12□□□□□ -1.75
CSDE1-212ENST00000529046 ANXA9O76027 345 aa4.12□□□□□ -1.75
CSDE1-212ENST00000529046 DFFBO76075 338 aa4.12□□□□□ -1.75
CSDE1-212ENST00000529046 KIAA0754O94854 1291 aa4.12□□□□□ -1.75
CSDE1-212ENST00000529046 SORBS2O94875 1100 aaKnown RBP4.12□□□□□ -1.75
CSDE1-212ENST00000529046 AP2A2O94973 939 aa4.12□□□□□ -1.75
CSDE1-212ENST00000529046 SIX3O95343 332 aaPredicted RBP4.12□□□□□ -1.75
CSDE1-212ENST00000529046 LCA5LO95447 670 aa4.12□□□□□ -1.75
CSDE1-212ENST00000529046 NGFP01138 241 aa4.12□□□□□ -1.75
CSDE1-212ENST00000529046 IGHEP01854 428 aa4.12□□□□□ -1.75
CSDE1-212ENST00000529046 APOA4P06727 396 aa4.12□□□□□ -1.75
CSDE1-212ENST00000529046 KLK3P07288 261 aaPredicted RBP4.12□□□□□ -1.75
CSDE1-212ENST00000529046 PRKAR1AP10644 381 aa4.12□□□□□ -1.75
CSDE1-212ENST00000529046 FOLR1P15328 257 aa4.12□□□□□ -1.75
CSDE1-212ENST00000529046 CDKN2BP42772 138 aa4.12□□□□□ -1.75
CSDE1-212ENST00000529046 TNNT3P45378 269 aaPredicted RBP4.12□□□□□ -1.75
CSDE1-212ENST00000529046 LEPRP48357 1165 aaKnown RBP4.12□□□□□ -1.75
CSDE1-212ENST00000529046 RPS15P62841 145 aaKnown RBP4.12□□□□□ -1.75
CSDE1-212ENST00000529046 AP1B1Q10567 949 aa4.12□□□□□ -1.75
CSDE1-212ENST00000529046 WASHC5Q12768 1159 aa4.12□□□□□ -1.75
CSDE1-212ENST00000529046 RPA4Q13156 261 aa4.12□□□□□ -1.75
CSDE1-212ENST00000529046 MSLNQ13421 630 aaPredicted RBP4.12□□□□□ -1.75
CSDE1-212ENST00000529046 MESDQ14696 234 aa4.12□□□□□ -1.75
CSDE1-212ENST00000529046 TAF13Q15543 124 aa4.12□□□□□ -1.75
CSDE1-212ENST00000529046 TAF1AQ15573 450 aaPredicted RBP4.12□□□□□ -1.75
CSDE1-212ENST00000529046 ZNF876PQ49A33 203 aa4.12□□□□□ -1.75
CSDE1-212ENST00000529046 GPR33Q49SQ1 333 aa4.12□□□□□ -1.75
CSDE1-212ENST00000529046 ZNF658BQ4V348 819 aaPredicted RBP4.12□□□□□ -1.75
CSDE1-212ENST00000529046 BCL7AQ4VC05 210 aa4.12□□□□□ -1.75
CSDE1-212ENST00000529046 TFDP3Q5H9I0 405 aa4.12□□□□□ -1.75
CSDE1-212ENST00000529046 CAVIN1Q6NZI2 390 aaKnown RBP4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 109.3 ms