RNA–Protein interactions for RNA: ENST00000528930.5

SSBP3-212, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best)

Gene SSBP3, Length 862 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-212ENST00000528930 Q9N2J8 555 aa7.65□□□□□ -1.18
SSBP3-212ENST00000528930 EQTNQ9NQ60 294 aa7.65□□□□□ -1.18
SSBP3-212ENST00000528930 SERHLQ9NQF3 203 aa7.65□□□□□ -1.18
SSBP3-212ENST00000528930 FBXL2Q9UKC9 423 aa7.65□□□□□ -1.18
SSBP3-212ENST00000528930 TRIM33Q9UPN9 1127 aa7.65□□□□□ -1.18
SSBP3-212ENST00000528930 MAPRE3Q9UPY8 281 aa7.65□□□□□ -1.18
SSBP3-212ENST00000528930 WIF1Q9Y5W5 379 aa7.65□□□□□ -1.18
SSBP3-212ENST00000528930 FREM1Q5H8C1 2179 aa7.64□□□□□ -1.19
SSBP3-212ENST00000528930 NUP214P35658 2090 aaPredicted RBP7.64□□□□□ -1.19
SSBP3-212ENST00000528930 PCNX3Q9H6A9 2034 aa7.64□□□□□ -1.19
SSBP3-212ENST00000528930 C15orf38-AP3S2A0A0A6YYH1 394 aa7.64□□□□□ -1.19
SSBP3-212ENST00000528930 A0A0G2JNJ9 132 aa7.64□□□□□ -1.19
SSBP3-212ENST00000528930 MBD3L4A6NDZ8 208 aaPredicted RBP7.64□□□□□ -1.19
SSBP3-212ENST00000528930 MBD3L5A6NJ08 208 aaPredicted RBP7.64□□□□□ -1.19
SSBP3-212ENST00000528930 KDM4EB2RXH2 506 aaPredicted RBP7.64□□□□□ -1.19
SSBP3-212ENST00000528930 ANKRD65E5RJM6 399 aa7.64□□□□□ -1.19
SSBP3-212ENST00000528930 CD5LO43866 347 aa7.64□□□□□ -1.19
SSBP3-212ENST00000528930 ZIC3O60481 467 aa7.64□□□□□ -1.19
SSBP3-212ENST00000528930 SCN2BO60939 215 aa7.64□□□□□ -1.19
SSBP3-212ENST00000528930 SOX30O94993 753 aa7.64□□□□□ -1.19
SSBP3-212ENST00000528930 C6orf47O95873 294 aa7.64□□□□□ -1.19
SSBP3-212ENST00000528930 GABRA1P14867 456 aa7.64□□□□□ -1.19
SSBP3-212ENST00000528930 EVI2BP34910 448 aa7.64□□□□□ -1.19
SSBP3-212ENST00000528930 GFRA1P56159 465 aa7.64□□□□□ -1.19
SSBP3-212ENST00000528930 PHC1P78364 1004 aa7.64□□□□□ -1.19
SSBP3-212ENST00000528930 MRPS22P82650 360 aaKnown RBP7.64□□□□□ -1.19
SSBP3-212ENST00000528930 TOMM20Q15388 145 aa7.64□□□□□ -1.19
SSBP3-212ENST00000528930 ZNHIT3Q15649 155 aaPredicted RBP7.64□□□□□ -1.19
SSBP3-212ENST00000528930 DUSP5Q16690 384 aa7.64□□□□□ -1.19
SSBP3-212ENST00000528930 C1orf185Q5T7R7 199 aa7.64□□□□□ -1.19
SSBP3-212ENST00000528930 GKAP1Q5VSY0 366 aaPredicted RBP7.64□□□□□ -1.19
SSBP3-212ENST00000528930 MFSD12Q6NUT3 480 aa7.64□□□□□ -1.19
SSBP3-212ENST00000528930 ZCCHC12Q6PEW1 402 aa7.64□□□□□ -1.19
SSBP3-212ENST00000528930 APOOLQ6UXV4 268 aa7.64□□□□□ -1.19
SSBP3-212ENST00000528930 Q6ZS46 218 aa7.64□□□□□ -1.19
SSBP3-212ENST00000528930 ACAD11Q709F0 780 aa7.64□□□□□ -1.19
SSBP3-212ENST00000528930 ZDHHC13Q8IUH4 622 aa7.64□□□□□ -1.19
SSBP3-212ENST00000528930 LRRC34Q8IZ02 419 aa7.64□□□□□ -1.19
SSBP3-212ENST00000528930 KIRREL3Q8IZU9 778 aa7.64□□□□□ -1.19
SSBP3-212ENST00000528930 NATD1Q8N6N6 113 aa7.64□□□□□ -1.19
SSBP3-212ENST00000528930 FADS6Q8N9I5 356 aa7.64□□□□□ -1.19
SSBP3-212ENST00000528930 MGARPQ8TDB4 240 aa7.64□□□□□ -1.19
SSBP3-212ENST00000528930 GPR151Q8TDV0 419 aa7.64□□□□□ -1.19
SSBP3-212ENST00000528930 OR5P2Q8WZ92 322 aa7.64□□□□□ -1.19
SSBP3-212ENST00000528930 WDYHV1Q96HA8 205 aa7.64□□□□□ -1.19
SSBP3-212ENST00000528930 MS4A4EQ96PG1 132 aa7.64□□□□□ -1.19
SSBP3-212ENST00000528930 DUSP26Q9BV47 211 aa7.64□□□□□ -1.19
SSBP3-212ENST00000528930 BHLHE41Q9C0J9 482 aaPredicted RBP7.64□□□□□ -1.19
SSBP3-212ENST00000528930 C3orf14Q9HBI5 128 aa7.64□□□□□ -1.19
SSBP3-212ENST00000528930 ATAD3AQ9NVI7 634 aa7.64□□□□□ -1.19
SSBP3-212ENST00000528930 THAP1Q9NVV9 213 aa7.64□□□□□ -1.19
SSBP3-212ENST00000528930 FBXO34Q9NWN3 711 aa7.64□□□□□ -1.19
SSBP3-212ENST00000528930 ALKBH4Q9NXW9 302 aa7.64□□□□□ -1.19
SSBP3-212ENST00000528930 Q9UFV3 132 aa7.64□□□□□ -1.19
SSBP3-212ENST00000528930 MRPS18CQ9Y3D5 142 aaKnown RBP7.64□□□□□ -1.19
SSBP3-212ENST00000528930 MED12Q93074 2177 aa7.64□□□□□ -1.19
SSBP3-212ENST00000528930 KIAA1549Q9HCM3 1950 aa7.63□□□□□ -1.19
SSBP3-212ENST00000528930 AHRRA9YTQ3 701 aa7.63□□□□□ -1.19
SSBP3-212ENST00000528930 SDHDO14521 159 aa7.63□□□□□ -1.19
SSBP3-212ENST00000528930 SCO2O43819 266 aa7.63□□□□□ -1.19
SSBP3-212ENST00000528930 KCNK2O95069 426 aa7.63□□□□□ -1.19
SSBP3-212ENST00000528930 KCNH1O95259 989 aa7.63□□□□□ -1.19
SSBP3-212ENST00000528930 EPPINO95925 133 aa7.63□□□□□ -1.19
SSBP3-212ENST00000528930 GHRHP01286 108 aa7.63□□□□□ -1.19
SSBP3-212ENST00000528930 HMGN2P05204 90 aaKnown RBP7.63□□□□□ -1.19
SSBP3-212ENST00000528930 ALDOCP09972 364 aaKnown RBP7.63□□□□□ -1.19
SSBP3-212ENST00000528930 DDX5P17844 614 aaKnown RBP7.63□□□□□ -1.19
SSBP3-212ENST00000528930 LBPP18428 481 aa7.63□□□□□ -1.19
SSBP3-212ENST00000528930 SRD5A2P31213 254 aa7.63□□□□□ -1.19
SSBP3-212ENST00000528930 RFX3P48380 749 aa7.63□□□□□ -1.19
SSBP3-212ENST00000528930 CCT3P49368 545 aaKnown RBP7.63□□□□□ -1.19
SSBP3-212ENST00000528930 CLNS1AP54105 237 aaKnown RBP7.63□□□□□ -1.19
SSBP3-212ENST00000528930 PSMD4P55036 377 aaKnown RBP7.63□□□□□ -1.19
SSBP3-212ENST00000528930 HBA1P69905 142 aa7.63□□□□□ -1.19
SSBP3-212ENST00000528930 PRR5P85299 388 aa7.63□□□□□ -1.19
SSBP3-212ENST00000528930 OCRLQ01968 901 aa7.63□□□□□ -1.19
SSBP3-212ENST00000528930 CPEB4Q17RY0 729 aaKnown RBP eCLIP7.63□□□□□ -1.19
SSBP3-212ENST00000528930 GRAMD1BQ3KR37 738 aa7.63□□□□□ -1.19
SSBP3-212ENST00000528930 LSM12Q3MHD2 195 aaKnown RBP7.63□□□□□ -1.19
SSBP3-212ENST00000528930 VPS26BQ4G0F5 336 aa7.63□□□□□ -1.19
SSBP3-212ENST00000528930 OR4F3Q6IEY1 312 aa7.63□□□□□ -1.19
SSBP3-212ENST00000528930 OGFOD2Q6N063 350 aa7.63□□□□□ -1.19
SSBP3-212ENST00000528930 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.63□□□□□ -1.19
SSBP3-212ENST00000528930 SZRD1Q7Z422 152 aa7.63□□□□□ -1.19
SSBP3-212ENST00000528930 ZAR1Q86SH2 424 aa7.63□□□□□ -1.19
SSBP3-212ENST00000528930 GALNT10Q86SR1 603 aa7.63□□□□□ -1.19
SSBP3-212ENST00000528930 MARCH3Q86UD3 253 aa7.63□□□□□ -1.19
SSBP3-212ENST00000528930 LIX1LQ8IVB5 337 aa7.63□□□□□ -1.19
SSBP3-212ENST00000528930 WDR75Q8IWA0 830 aaKnown RBP7.63□□□□□ -1.19
SSBP3-212ENST00000528930 OR2M3Q8NG83 312 aa7.63□□□□□ -1.19
SSBP3-212ENST00000528930 OR8J2Q8NGG1 315 aa7.63□□□□□ -1.19
SSBP3-212ENST00000528930 OR4C3Q8NH37 302 aa7.63□□□□□ -1.19
SSBP3-212ENST00000528930 FBXO30Q8TB52 745 aa7.63□□□□□ -1.19
SSBP3-212ENST00000528930 RAB3IL1Q8TBN0 382 aa7.63□□□□□ -1.19
SSBP3-212ENST00000528930 DUSP19Q8WTR2 217 aa7.63□□□□□ -1.19
SSBP3-212ENST00000528930 ZFAND2BQ8WV99 257 aa7.63□□□□□ -1.19
SSBP3-212ENST00000528930 SLC9A6Q92581 669 aa7.63□□□□□ -1.19
SSBP3-212ENST00000528930 ABTB1Q969K4 478 aaPredicted RBP7.63□□□□□ -1.19
SSBP3-212ENST00000528930 PIGTQ969N2 578 aa7.63□□□□□ -1.19
SSBP3-212ENST00000528930 OTUB1Q96FW1 271 aaPredicted RBP7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms