RNA–Protein interactions for RNA: ENST00000525852.3

CTTN-210, Transcript of cortactin, humanhuman

TSL 5

Gene CTTN, Length 1,470 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-210ENST00000525852 CRISP3P54108 245 aa11.13□□□□□ -0.63
CTTN-210ENST00000525852 PER3P56645 1201 aa11.13□□□□□ -0.63
CTTN-210ENST00000525852 CLDN18P56856 261 aa11.13□□□□□ -0.63
CTTN-210ENST00000525852 SRYQ05066 204 aa11.13□□□□□ -0.63
CTTN-210ENST00000525852 MMEL1Q495T6 779 aa11.13□□□□□ -0.63
CTTN-210ENST00000525852 GLYR1Q49A26 553 aaPredicted RBP11.13□□□□□ -0.63
CTTN-210ENST00000525852 LSRQ86X29 649 aaPredicted RBP11.13□□□□□ -0.63
CTTN-210ENST00000525852 TMCO5AQ8N6Q1 288 aa11.13□□□□□ -0.63
CTTN-210ENST00000525852 NFKBIDQ8NI38 313 aa11.13□□□□□ -0.63
CTTN-210ENST00000525852 POC1BQ8TC44 478 aa11.13□□□□□ -0.63
CTTN-210ENST00000525852 GPR119Q8TDV5 335 aa11.13□□□□□ -0.63
CTTN-210ENST00000525852 ITLN2Q8WWU7 325 aaPredicted RBP11.13□□□□□ -0.63
CTTN-210ENST00000525852 CNOT9Q92600 299 aaKnown RBP11.13□□□□□ -0.63
CTTN-210ENST00000525852 PMM1Q92871 262 aa11.13□□□□□ -0.63
CTTN-210ENST00000525852 LRRC58Q96CX6 371 aa11.13□□□□□ -0.63
CTTN-210ENST00000525852 PIGQQ9BRB3 760 aa11.13□□□□□ -0.63
CTTN-210ENST00000525852 THUMPD3Q9BV44 507 aaKnown RBP11.13□□□□□ -0.63
CTTN-210ENST00000525852 LAT2Q9GZY6 243 aa11.13□□□□□ -0.63
CTTN-210ENST00000525852 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.13□□□□□ -0.63
CTTN-210ENST00000525852 SUCOQ9UBS9 1254 aaKnown RBP11.13□□□□□ -0.63
CTTN-210ENST00000525852 CORO2BQ9UQ03 480 aa11.13□□□□□ -0.63
CTTN-210ENST00000525852 NBPF19A0A087WUL8 3843 aa11.13□□□□□ -0.63
CTTN-210ENST00000525852 DOCK7Q96N67 2140 aa11.13□□□□□ -0.63
CTTN-210ENST00000525852 A0A0G2JPF8 293 aa11.12□□□□□ -0.63
CTTN-210ENST00000525852 TMEM247A6NEH6 219 aa11.12□□□□□ -0.63
CTTN-210ENST00000525852 HNRNPCL2B2RXH8 293 aa11.12□□□□□ -0.63
CTTN-210ENST00000525852 HNRNPCL3B7ZW38 293 aa11.12□□□□□ -0.63
CTTN-210ENST00000525852 H0YC42 278 aa11.12□□□□□ -0.63
CTTN-210ENST00000525852 HNRNPCL1O60812 293 aaKnown RBP11.12□□□□□ -0.63
CTTN-210ENST00000525852 DNAJA2O60884 412 aa11.12□□□□□ -0.63
CTTN-210ENST00000525852 ADAM11O75078 769 aa11.12□□□□□ -0.63
CTTN-210ENST00000525852 CLDN1O95832 211 aa11.12□□□□□ -0.63
CTTN-210ENST00000525852 DBIP07108 87 aaKnown RBP11.12□□□□□ -0.63
CTTN-210ENST00000525852 HNRNPCL4P0DMR1 293 aa11.12□□□□□ -0.63
CTTN-210ENST00000525852 CPN1P15169 458 aa11.12□□□□□ -0.63
CTTN-210ENST00000525852 ZNF708P17019 499 aa11.12□□□□□ -0.63
CTTN-210ENST00000525852 PSMA4P25789 261 aaKnown RBP11.12□□□□□ -0.63
CTTN-210ENST00000525852 CCR4P51679 360 aa11.12□□□□□ -0.63
CTTN-210ENST00000525852 TPD52P55327 224 aaPredicted RBP11.12□□□□□ -0.63
CTTN-210ENST00000525852 SUMO3P55854 103 aaPredicted RBP11.12□□□□□ -0.63
CTTN-210ENST00000525852 CDK6Q00534 326 aa11.12□□□□□ -0.63
CTTN-210ENST00000525852 PMPCAQ10713 525 aa11.12□□□□□ -0.63
CTTN-210ENST00000525852 FOXF1Q12946 379 aa11.12□□□□□ -0.63
CTTN-210ENST00000525852 GNA13Q14344 377 aa11.12□□□□□ -0.63
CTTN-210ENST00000525852 ACSF3Q4G176 576 aaPredicted RBP11.12□□□□□ -0.63
CTTN-210ENST00000525852 C1orf185Q5T7R7 199 aa11.12□□□□□ -0.63
CTTN-210ENST00000525852 NANOGP8Q6NSW7 305 aa11.12□□□□□ -0.63
CTTN-210ENST00000525852 ENPP6Q6UWR7 440 aa11.12□□□□□ -0.63
CTTN-210ENST00000525852 PLXDC2Q6UX71 529 aa11.12□□□□□ -0.63
CTTN-210ENST00000525852 RPTNQ6XPR3 784 aa11.12□□□□□ -0.63
CTTN-210ENST00000525852 SEM1Q6ZVN7 128 aa11.12□□□□□ -0.63
CTTN-210ENST00000525852 VRK2Q86Y07 508 aa11.12□□□□□ -0.63
CTTN-210ENST00000525852 PTOV1Q86YD1 416 aa11.12□□□□□ -0.63
CTTN-210ENST00000525852 PEX5LQ8IYB4 626 aa11.12□□□□□ -0.63
CTTN-210ENST00000525852 GTPBP8Q8N3Z3 284 aaPredicted RBP11.12□□□□□ -0.63
CTTN-210ENST00000525852 OR52P1PQ8NH57 321 aa11.12□□□□□ -0.63
CTTN-210ENST00000525852 OR5W2Q8NH69 310 aa11.12□□□□□ -0.63
CTTN-210ENST00000525852 RP9Q8TA86 221 aaKnown RBP11.12□□□□□ -0.63
CTTN-210ENST00000525852 WDR60Q8WVS4 1066 aa11.12□□□□□ -0.63
CTTN-210ENST00000525852 ZBTB8AQ96BR9 441 aa11.12□□□□□ -0.63
CTTN-210ENST00000525852 RCN3Q96D15 328 aa11.12□□□□□ -0.63
CTTN-210ENST00000525852 RNF145Q96MT1 663 aa11.12□□□□□ -0.63
CTTN-210ENST00000525852 CCT8L2Q96SF2 557 aa11.12□□□□□ -0.63
CTTN-210ENST00000525852 TTYH2Q9BSA4 534 aa11.12□□□□□ -0.63
CTTN-210ENST00000525852 RSPO3Q9BXY4 272 aaPredicted RBP11.12□□□□□ -0.63
CTTN-210ENST00000525852 TMEM38AQ9H6F2 299 aa11.12□□□□□ -0.63
CTTN-210ENST00000525852 KAT8Q9H7Z6 458 aaKnown RBP11.12□□□□□ -0.63
CTTN-210ENST00000525852 NANOGQ9H9S0 305 aa11.12□□□□□ -0.63
CTTN-210ENST00000525852 BCL2L10Q9HD36 194 aa11.12□□□□□ -0.63
CTTN-210ENST00000525852 DNAJB12Q9NXW2 375 aaKnown RBP11.12□□□□□ -0.63
CTTN-210ENST00000525852 SLC35A3Q9Y2D2 325 aa11.12□□□□□ -0.63
CTTN-210ENST00000525852 MED12LQ86YW9 2145 aa11.12□□□□□ -0.63
CTTN-210ENST00000525852 ADGRG4Q8IZF6 3080 aa11.12□□□□□ -0.63
CTTN-210ENST00000525852 INTS1Q8N201 2190 aaKnown RBP11.12□□□□□ -0.63
CTTN-210ENST00000525852 C7orf72A4D263 438 aa11.12□□□□□ -0.63
CTTN-210ENST00000525852 AHRRA9YTQ3 701 aa11.12□□□□□ -0.63
CTTN-210ENST00000525852 C5orf58C9J3I9 102 aa11.12□□□□□ -0.63
CTTN-210ENST00000525852 FAM47E-STBD1D6RA91 191 aa11.12□□□□□ -0.63
CTTN-210ENST00000525852 H3BML4 177 aa11.12□□□□□ -0.63
CTTN-210ENST00000525852 SHOX2O60902 331 aaPredicted RBP11.12□□□□□ -0.63
CTTN-210ENST00000525852 PGM3O95394 542 aa11.12□□□□□ -0.63
CTTN-210ENST00000525852 NPPAP01160 153 aa11.12□□□□□ -0.63
CTTN-210ENST00000525852 GLI4P10075 376 aa11.12□□□□□ -0.63
CTTN-210ENST00000525852 NID1P14543 1247 aa11.12□□□□□ -0.63
CTTN-210ENST00000525852 GABRA1P14867 456 aa11.12□□□□□ -0.63
CTTN-210ENST00000525852 IL7RP16871 459 aa11.12□□□□□ -0.63
CTTN-210ENST00000525852 ZNF17P17021 662 aa11.12□□□□□ -0.63
CTTN-210ENST00000525852 POU3F2P20265 443 aaPredicted RBP11.12□□□□□ -0.63
CTTN-210ENST00000525852 IL11P20809 199 aa11.12□□□□□ -0.63
CTTN-210ENST00000525852 GZMMP51124 257 aa11.12□□□□□ -0.63
CTTN-210ENST00000525852 SUCLG1P53597 346 aaKnown RBP11.12□□□□□ -0.63
CTTN-210ENST00000525852 CLDN15P56746 228 aa11.12□□□□□ -0.63
CTTN-210ENST00000525852 CLDN20P56880 219 aa11.12□□□□□ -0.63
CTTN-210ENST00000525852 NUP107P57740 925 aa11.12□□□□□ -0.63
CTTN-210ENST00000525852 CBFBQ13951 182 aa11.12□□□□□ -0.63
CTTN-210ENST00000525852 SCARB2Q14108 478 aa11.12□□□□□ -0.63
CTTN-210ENST00000525852 QPRTQ15274 297 aa11.12□□□□□ -0.63
CTTN-210ENST00000525852 RABL3Q5HYI8 236 aa11.12□□□□□ -0.63
CTTN-210ENST00000525852 MRPL2Q5T653 305 aaKnown RBP11.12□□□□□ -0.63
CTTN-210ENST00000525852 PRAMEF8Q5VWM4 474 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms