RNA–Protein interactions for RNA: ENST00000525241.1

CD44-215, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 440 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-215ENST00000525241 SRXN1Q9BYN0 137 aa2.87□□□□□ -1.95
CD44-215ENST00000525241 B3GNT2Q9NY97 397 aa2.87□□□□□ -1.95
CD44-215ENST00000525241 UBQLN1Q9UMX0 589 aaKnown RBP2.87□□□□□ -1.95
CD44-215ENST00000525241 TMEM110-MUSTN1A8MSY1 372 aa2.86□□□□□ -1.95
CD44-215ENST00000525241 K7N7A8 449 aa2.86□□□□□ -1.95
CD44-215ENST00000525241 TRIM16O95361 564 aa2.86□□□□□ -1.95
CD44-215ENST00000525241 F10P00742 488 aa2.86□□□□□ -1.95
CD44-215ENST00000525241 HPNP05981 417 aa2.86□□□□□ -1.95
CD44-215ENST00000525241 PRG2P13727 222 aa2.86□□□□□ -1.95
CD44-215ENST00000525241 GABRR1P24046 479 aa2.86□□□□□ -1.95
CD44-215ENST00000525241 AQP1P29972 269 aa2.86□□□□□ -1.95
CD44-215ENST00000525241 NTSP30990 170 aa2.86□□□□□ -1.95
CD44-215ENST00000525241 SCGB2A2Q13296 93 aa2.86□□□□□ -1.95
CD44-215ENST00000525241 ACSM5Q6NUN0 579 aa2.86□□□□□ -1.95
CD44-215ENST00000525241 FAM199XQ6PEV8 388 aaPredicted RBP2.86□□□□□ -1.95
CD44-215ENST00000525241 TMEM110Q86TL2 294 aa2.86□□□□□ -1.95
CD44-215ENST00000525241 LCA5Q86VQ0 697 aa2.86□□□□□ -1.95
CD44-215ENST00000525241 TMEM17Q86X19 198 aa2.86□□□□□ -1.95
CD44-215ENST00000525241 ZNF100Q8IYN0 542 aa2.86□□□□□ -1.95
CD44-215ENST00000525241 ALLCQ8N6M5 410 aa2.86□□□□□ -1.95
CD44-215ENST00000525241 AENQ8WTP8 325 aaKnown RBP2.86□□□□□ -1.95
CD44-215ENST00000525241 ZNF799Q96GE5 643 aa2.86□□□□□ -1.95
CD44-215ENST00000525241 ZNF285Q96NJ3 590 aa2.86□□□□□ -1.95
CD44-215ENST00000525241 CD274Q9NZQ7 290 aa2.86□□□□□ -1.95
CD44-215ENST00000525241 LCMT1Q9UIC8 334 aa2.86□□□□□ -1.95
CD44-215ENST00000525241 CHMP2BQ9UQN3 213 aa2.86□□□□□ -1.95
CD44-215ENST00000525241 OARD1Q9Y530 152 aa2.86□□□□□ -1.95
CD44-215ENST00000525241 LRRK1Q38SD2 2015 aa2.86□□□□□ -1.95
CD44-215ENST00000525241 A0A087WZY1 265 aa2.85□□□□□ -1.95
CD44-215ENST00000525241 A0A1B0GWB2 263 aa2.85□□□□□ -1.95
CD44-215ENST00000525241 PINLYPA6NC86 204 aa2.85□□□□□ -1.95
CD44-215ENST00000525241 CLDN5O00501 218 aa2.85□□□□□ -1.95
CD44-215ENST00000525241 CTAGE5O15320 804 aa2.85□□□□□ -1.95
CD44-215ENST00000525241 ZNF264O43296 627 aa2.85□□□□□ -1.95
CD44-215ENST00000525241 NR2C1P13056 603 aa2.85□□□□□ -1.95
CD44-215ENST00000525241 TNNI3P19429 210 aa2.85□□□□□ -1.95
CD44-215ENST00000525241 TPSB2P20231 275 aa2.85□□□□□ -1.95
CD44-215ENST00000525241 MDKP21741 143 aaPredicted RBP2.85□□□□□ -1.95
CD44-215ENST00000525241 NMT1P30419 496 aaKnown RBP2.85□□□□□ -1.95
CD44-215ENST00000525241 EPHX2P34913 555 aa2.85□□□□□ -1.95
CD44-215ENST00000525241 RAB40BQ12829 278 aa2.85□□□□□ -1.95
CD44-215ENST00000525241 TPSAB1Q15661 275 aa2.85□□□□□ -1.95
CD44-215ENST00000525241 SLC5A12Q1EHB4 618 aa2.85□□□□□ -1.95
CD44-215ENST00000525241 KRTAP13-3Q3SY46 172 aa2.85□□□□□ -1.95
CD44-215ENST00000525241 ATF7IP2Q5U623 682 aa2.85□□□□□ -1.95
CD44-215ENST00000525241 APTXQ7Z2E3 356 aaKnown RBP2.85□□□□□ -1.95
CD44-215ENST00000525241 C15orf54Q8N8G6 183 aa2.85□□□□□ -1.95
CD44-215ENST00000525241 LINC01555Q8NAE3 123 aa2.85□□□□□ -1.95
CD44-215ENST00000525241 OR9A1PQ8NGU1 263 aa2.85□□□□□ -1.95
CD44-215ENST00000525241 SLC5A11Q8WWX8 675 aa2.85□□□□□ -1.95
CD44-215ENST00000525241 WDR76Q9H967 626 aa2.85□□□□□ -1.95
CD44-215ENST00000525241 NAP1L2Q9ULW6 460 aaPredicted RBP2.85□□□□□ -1.95
CD44-215ENST00000525241 SCML2Q9UQR0 700 aa2.85□□□□□ -1.95
CD44-215ENST00000525241 CHD4Q14839 1912 aa2.84□□□□□ -1.95
CD44-215ENST00000525241 PPIAL4CA0A0B4J2A2 164 aa2.84□□□□□ -1.95
CD44-215ENST00000525241 A0A0J9YXY3 114 aa2.84□□□□□ -1.95
CD44-215ENST00000525241 USP27XA6NNY8 438 aa2.84□□□□□ -1.95
CD44-215ENST00000525241 SULT2B1O00204 365 aa2.84□□□□□ -1.95
CD44-215ENST00000525241 SUPT7LO94864 414 aa2.84□□□□□ -1.95
CD44-215ENST00000525241 PPIAL4GP0DN37 164 aa2.84□□□□□ -1.95
CD44-215ENST00000525241 CCNE1P24864 410 aa2.84□□□□□ -1.95
CD44-215ENST00000525241 ADSSP30520 456 aa2.84□□□□□ -1.95
CD44-215ENST00000525241 CD80P33681 288 aa2.84□□□□□ -1.95
CD44-215ENST00000525241 DLSTP36957 453 aa2.84□□□□□ -1.95
CD44-215ENST00000525241 TLE4Q04727 773 aa2.84□□□□□ -1.95
CD44-215ENST00000525241 LIPNQ5VXI9 398 aa2.84□□□□□ -1.95
CD44-215ENST00000525241 WDR74Q6RFH5 385 aaPredicted RBP2.84□□□□□ -1.95
CD44-215ENST00000525241 DPY19L4Q7Z388 723 aa2.84□□□□□ -1.95
CD44-215ENST00000525241 FAM220AQ7Z4H9 259 aa2.84□□□□□ -1.95
CD44-215ENST00000525241 TMEM252Q8N6L7 170 aa2.84□□□□□ -1.95
CD44-215ENST00000525241 OR2AP1Q8NGE2 309 aa2.84□□□□□ -1.95
CD44-215ENST00000525241 MYLPFQ96A32 169 aa2.84□□□□□ -1.95
CD44-215ENST00000525241 MS4A14Q96JA4 679 aa2.84□□□□□ -1.95
CD44-215ENST00000525241 SLC6A7Q99884 636 aa2.84□□□□□ -1.95
CD44-215ENST00000525241 CRNKL1Q9BZJ0 848 aaKnown RBP2.84□□□□□ -1.95
CD44-215ENST00000525241 NANSQ9NR45 359 aa2.84□□□□□ -1.95
CD44-215ENST00000525241 TAS2R3Q9NYW6 316 aa2.84□□□□□ -1.95
CD44-215ENST00000525241 DCDC2Q9UHG0 476 aa2.84□□□□□ -1.95
CD44-215ENST00000525241 NEU3Q9UQ49 428 aa2.84□□□□□ -1.95
CD44-215ENST00000525241 GSTK1Q9Y2Q3 226 aa2.84□□□□□ -1.95
CD44-215ENST00000525241 PLLPQ9Y342 182 aa2.84□□□□□ -1.95
CD44-215ENST00000525241 MFHAS1Q9Y4C4 1052 aa2.84□□□□□ -1.95
CD44-215ENST00000525241 U3KQV3 271 aa2.84□□□□□ -1.95
CD44-215ENST00000525241 BBOX1O75936 387 aa2.83□□□□□ -1.96
CD44-215ENST00000525241 CSF2P04141 144 aa2.83□□□□□ -1.96
CD44-215ENST00000525241 CYP2B6P20813 491 aa2.83□□□□□ -1.96
CD44-215ENST00000525241 TBXA2RP21731 343 aa2.83□□□□□ -1.96
CD44-215ENST00000525241 PSMA2P25787 234 aa2.83□□□□□ -1.96
CD44-215ENST00000525241 HTR2AP28223 471 aa2.83□□□□□ -1.96
CD44-215ENST00000525241 HOXD10P28358 340 aa2.83□□□□□ -1.96
CD44-215ENST00000525241 HPDP32754 393 aaPredicted RBP2.83□□□□□ -1.96
CD44-215ENST00000525241 ACADVLP49748 655 aa2.83□□□□□ -1.96
CD44-215ENST00000525241 EWSR1Q01844 656 aaKnown RBP eCLIP2.83□□□□□ -1.96
CD44-215ENST00000525241 DAZ2Q13117 558 aaKnown RBP2.83□□□□□ -1.96
CD44-215ENST00000525241 ZNF630Q2M218 657 aaPredicted RBP2.83□□□□□ -1.96
CD44-215ENST00000525241 TMEM41BQ5BJD5 291 aa2.83□□□□□ -1.96
CD44-215ENST00000525241 UNQ9370/PRO34162Q6UXP9 181 aa2.83□□□□□ -1.96
CD44-215ENST00000525241 PAQR8Q8TEZ7 354 aa2.83□□□□□ -1.96
CD44-215ENST00000525241 DCUN1D4Q92564 292 aa2.83□□□□□ -1.96
CD44-215ENST00000525241 SLC35E1Q96K37 410 aa2.83□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms