RNA–Protein interactions for RNA: ENST00000523088.5

HDAC3-216, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-216ENST00000523088 CLDN5O00501 218 aa7.02□□□□□ -1.29
HDAC3-216ENST00000523088 PIP5K1BO14986 540 aa7.02□□□□□ -1.29
HDAC3-216ENST00000523088 UBDO15205 165 aa7.02□□□□□ -1.29
HDAC3-216ENST00000523088 INPP4BO15327 924 aa7.02□□□□□ -1.29
HDAC3-216ENST00000523088 OR10H2O60403 315 aa7.02□□□□□ -1.29
HDAC3-216ENST00000523088 CILPO75339 1184 aa7.02□□□□□ -1.29
HDAC3-216ENST00000523088 FBXO24O75426 580 aa7.02□□□□□ -1.29
HDAC3-216ENST00000523088 GADD45GO95257 159 aa7.02□□□□□ -1.29
HDAC3-216ENST00000523088 VAPBO95292 243 aa7.02□□□□□ -1.29
HDAC3-216ENST00000523088 LY86O95711 162 aa7.02□□□□□ -1.29
HDAC3-216ENST00000523088 CYB5R3P00387 301 aaPredicted RBP7.02□□□□□ -1.29
HDAC3-216ENST00000523088 THBS1P07996 1170 aa7.02□□□□□ -1.29
HDAC3-216ENST00000523088 FBXO45P0C2W1 286 aa7.02□□□□□ -1.29
HDAC3-216ENST00000523088 GABRA1P14867 456 aa7.02□□□□□ -1.29
HDAC3-216ENST00000523088 GABRB3P28472 473 aa7.02□□□□□ -1.29
HDAC3-216ENST00000523088 GNRHRP30968 328 aa7.02□□□□□ -1.29
HDAC3-216ENST00000523088 PGM1P36871 562 aa7.02□□□□□ -1.29
HDAC3-216ENST00000523088 MATKP42679 507 aa7.02□□□□□ -1.29
HDAC3-216ENST00000523088 GCLMP48507 274 aa7.02□□□□□ -1.29
HDAC3-216ENST00000523088 CYB561P49447 251 aa7.02□□□□□ -1.29
HDAC3-216ENST00000523088 MMP15P51511 669 aa7.02□□□□□ -1.29
HDAC3-216ENST00000523088 PLA2G16P53816 162 aa7.02□□□□□ -1.29
HDAC3-216ENST00000523088 SLC18A1P54219 525 aa7.02□□□□□ -1.29
HDAC3-216ENST00000523088 BCAT1P54687 386 aa7.02□□□□□ -1.29
HDAC3-216ENST00000523088 CDH11P55287 796 aa7.02□□□□□ -1.29
HDAC3-216ENST00000523088 SUMO3P55854 103 aaPredicted RBP7.02□□□□□ -1.29
HDAC3-216ENST00000523088 RPS15P62841 145 aaKnown RBP7.02□□□□□ -1.29
HDAC3-216ENST00000523088 SSBP2P81877 361 aaPredicted RBP7.02□□□□□ -1.29
HDAC3-216ENST00000523088 LAPTM4AQ15012 233 aa7.02□□□□□ -1.29
HDAC3-216ENST00000523088 NTRK2Q16620 822 aa7.02□□□□□ -1.29
HDAC3-216ENST00000523088 ATP6V1FQ16864 119 aa7.02□□□□□ -1.29
HDAC3-216ENST00000523088 RSPO4Q2I0M5 234 aaPredicted RBP7.02□□□□□ -1.29
HDAC3-216ENST00000523088 CLEC16AQ2KHT3 1053 aa7.02□□□□□ -1.29
HDAC3-216ENST00000523088 C18orf21Q32NC0 220 aaPredicted RBP7.02□□□□□ -1.29
HDAC3-216ENST00000523088 PCID2Q5JVF3 399 aa7.02□□□□□ -1.29
HDAC3-216ENST00000523088 GPRC6AQ5T6X5 926 aa7.02□□□□□ -1.29
HDAC3-216ENST00000523088 LPCAT4Q643R3 524 aa7.02□□□□□ -1.29
HDAC3-216ENST00000523088 WBP2NLQ6ICG8 309 aa7.02□□□□□ -1.29
HDAC3-216ENST00000523088 ZNF529Q6P280 563 aa7.02□□□□□ -1.29
HDAC3-216ENST00000523088 CLEC20AQ6ZU45 233 aa7.02□□□□□ -1.29
HDAC3-216ENST00000523088 KCTD9Q7L273 389 aa7.02□□□□□ -1.29
HDAC3-216ENST00000523088 TCF24Q7RTU0 167 aa7.02□□□□□ -1.29
HDAC3-216ENST00000523088 MRPL21Q7Z2W9 205 aaKnown RBP7.02□□□□□ -1.29
HDAC3-216ENST00000523088 TSPAN33Q86UF1 283 aa7.02□□□□□ -1.29
HDAC3-216ENST00000523088 PIM3Q86V86 326 aa7.02□□□□□ -1.29
HDAC3-216ENST00000523088 CACUL1Q86Y37 369 aa7.02□□□□□ -1.29
HDAC3-216ENST00000523088 NRROSQ86YC3 692 aa7.02□□□□□ -1.29
HDAC3-216ENST00000523088 LYSMD2Q8IV50 215 aa7.02□□□□□ -1.29
HDAC3-216ENST00000523088 ZDHHC21Q8IVQ6 265 aa7.02□□□□□ -1.29
HDAC3-216ENST00000523088 EFCAB3Q8N7B9 438 aa7.02□□□□□ -1.29
HDAC3-216ENST00000523088 L3MBTL4Q8NA19 623 aa7.02□□□□□ -1.29
HDAC3-216ENST00000523088 CYB561A3Q8NBI2 242 aa7.02□□□□□ -1.29
HDAC3-216ENST00000523088 OR56B1Q8NGI3 324 aa7.02□□□□□ -1.29
HDAC3-216ENST00000523088 TRMT10AQ8TBZ6 339 aaKnown RBP7.02□□□□□ -1.29
HDAC3-216ENST00000523088 SPPL2AQ8TCT8 520 aa7.02□□□□□ -1.29
HDAC3-216ENST00000523088 RNF133Q8WVZ7 376 aa7.02□□□□□ -1.29
HDAC3-216ENST00000523088 SLC7A6Q92536 515 aa7.02□□□□□ -1.29
HDAC3-216ENST00000523088 TM9SF4Q92544 642 aa7.02□□□□□ -1.29
HDAC3-216ENST00000523088 ARRDC3Q96B67 414 aa7.02□□□□□ -1.29
HDAC3-216ENST00000523088 CREB3L1Q96BA8 519 aa7.02□□□□□ -1.29
HDAC3-216ENST00000523088 OXNAD1Q96HP4 312 aaPredicted RBP7.02□□□□□ -1.29
HDAC3-216ENST00000523088 FAM84AQ96KN4 292 aa7.02□□□□□ -1.29
HDAC3-216ENST00000523088 RHOVQ96L33 236 aa7.02□□□□□ -1.29
HDAC3-216ENST00000523088 OR2V2Q96R30 315 aa7.02□□□□□ -1.29
HDAC3-216ENST00000523088 PANX1Q96RD7 426 aa7.02□□□□□ -1.29
HDAC3-216ENST00000523088 PHB2Q99623 299 aa7.02□□□□□ -1.29
HDAC3-216ENST00000523088 PIGQQ9BRB3 760 aa7.02□□□□□ -1.29
HDAC3-216ENST00000523088 PIMREGQ9BSJ6 248 aa7.02□□□□□ -1.29
HDAC3-216ENST00000523088 THAP7Q9BT49 309 aaPredicted RBP7.02□□□□□ -1.29
HDAC3-216ENST00000523088 DCUN1D5Q9BTE7 237 aa7.02□□□□□ -1.29
HDAC3-216ENST00000523088 ZNF426Q9BUY5 554 aa7.02□□□□□ -1.29
HDAC3-216ENST00000523088 BOCQ9BWV1 1114 aa7.02□□□□□ -1.29
HDAC3-216ENST00000523088 LGR4Q9BXB1 951 aa7.02□□□□□ -1.29
HDAC3-216ENST00000523088 OSBPL11Q9BXB4 747 aa7.02□□□□□ -1.29
HDAC3-216ENST00000523088 SEMA6AQ9H2E6 1030 aa7.02□□□□□ -1.29
HDAC3-216ENST00000523088 DPEP2Q9H4A9 486 aa7.02□□□□□ -1.29
HDAC3-216ENST00000523088 ACTL8Q9H568 366 aa7.02□□□□□ -1.29
HDAC3-216ENST00000523088 IPPKQ9H8X2 491 aa7.02□□□□□ -1.29
HDAC3-216ENST00000523088 CACYBPQ9HB71 228 aaKnown RBP7.02□□□□□ -1.29
HDAC3-216ENST00000523088 PLSCR3Q9NRY6 295 aa7.02□□□□□ -1.29
HDAC3-216ENST00000523088 SEMA4GQ9NTN9 838 aa7.02□□□□□ -1.29
HDAC3-216ENST00000523088 PAK1IP1Q9NWT1 392 aaPredicted RBP7.02□□□□□ -1.29
HDAC3-216ENST00000523088 SMPD4Q9NXE4 827 aa7.02□□□□□ -1.29
HDAC3-216ENST00000523088 GSKIPQ9P0R6 139 aa7.02□□□□□ -1.29
HDAC3-216ENST00000523088 STOX2Q9P2F5 926 aaPredicted RBP7.02□□□□□ -1.29
HDAC3-216ENST00000523088 DEC1Q9P2X7 70 aa7.02□□□□□ -1.29
HDAC3-216ENST00000523088 DNAJB11Q9UBS4 358 aa7.02□□□□□ -1.29
HDAC3-216ENST00000523088 GHRLQ9UBU3 117 aa7.02□□□□□ -1.29
HDAC3-216ENST00000523088 UBQLN2Q9UHD9 624 aa7.02□□□□□ -1.29
HDAC3-216ENST00000523088 DKKL1Q9UK85 242 aa7.02□□□□□ -1.29
HDAC3-216ENST00000523088 FBXO5Q9UKT4 447 aa7.02□□□□□ -1.29
HDAC3-216ENST00000523088 SRPK3Q9UPE1 567 aa7.02□□□□□ -1.29
HDAC3-216ENST00000523088 SLC7A11Q9UPY5 501 aa7.02□□□□□ -1.29
HDAC3-216ENST00000523088 SLC6A5Q9Y345 797 aa7.02□□□□□ -1.29
HDAC3-216ENST00000523088 TMEM184BQ9Y519 407 aaPredicted RBP7.02□□□□□ -1.29
HDAC3-216ENST00000523088 NME7Q9Y5B8 376 aa7.02□□□□□ -1.29
HDAC3-216ENST00000523088 MMP24Q9Y5R2 645 aa7.02□□□□□ -1.29
HDAC3-216ENST00000523088 SDK1Q7Z5N4 2213 aa7.02□□□□□ -1.29
HDAC3-216ENST00000523088 CNOT1A5YKK6 2376 aaKnown RBP7.01□□□□□ -1.29
HDAC3-216ENST00000523088 YLPM1P49750 1951 aaKnown RBP7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms