RNA–Protein interactions for RNA: ENST00000518839.1

TRAPPC9-205, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-205ENST00000518839 GPR87Q9BY21 358 aa13.83□□□□□ -0.2
TRAPPC9-205ENST00000518839 TBL1XR1Q9BZK7 514 aa13.83□□□□□ -0.2
TRAPPC9-205ENST00000518839 MMP25Q9NPA2 562 aa13.83□□□□□ -0.2
TRAPPC9-205ENST00000518839 TUBA8Q9NY65 449 aaPredicted RBP13.83□□□□□ -0.2
TRAPPC9-205ENST00000518839 NTNG1Q9Y2I2 539 aa13.83□□□□□ -0.2
TRAPPC9-205ENST00000518839 PCDHGA6Q9Y5G7 932 aa13.83□□□□□ -0.2
TRAPPC9-205ENST00000518839 HS3ST3B1Q9Y662 390 aa13.83□□□□□ -0.2
TRAPPC9-205ENST00000518839 SDK2Q58EX2 2172 aa13.82□□□□□ -0.2
TRAPPC9-205ENST00000518839 A0A087WXM4 84 aa13.82□□□□□ -0.2
TRAPPC9-205ENST00000518839 NSG1A0A0A6YYJ2 146 aa13.82□□□□□ -0.2
TRAPPC9-205ENST00000518839 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.82□□□□□ -0.2
TRAPPC9-205ENST00000518839 A0A1B0GWA3 101 aa13.82□□□□□ -0.2
TRAPPC9-205ENST00000518839 HTR3EA5X5Y0 456 aa13.82□□□□□ -0.2
TRAPPC9-205ENST00000518839 ZAR1LA6NP61 321 aa13.82□□□□□ -0.2
TRAPPC9-205ENST00000518839 NDUFB5O43674 189 aa13.82□□□□□ -0.2
TRAPPC9-205ENST00000518839 PRKNO60260 465 aaPredicted RBP13.82□□□□□ -0.2
TRAPPC9-205ENST00000518839 BCAS1O75363 584 aaPredicted RBP13.82□□□□□ -0.2
TRAPPC9-205ENST00000518839 LYPD3O95274 346 aa13.82□□□□□ -0.2
TRAPPC9-205ENST00000518839 LINGO3P0C6S8 592 aa13.82□□□□□ -0.2
TRAPPC9-205ENST00000518839 CCDC159P0C7I6 412 aa13.82□□□□□ -0.2
TRAPPC9-205ENST00000518839 ICAM2P13598 275 aa13.82□□□□□ -0.2
TRAPPC9-205ENST00000518839 CHMP24386 653 aa13.82□□□□□ -0.2
TRAPPC9-205ENST00000518839 FPR3P25089 353 aa13.82□□□□□ -0.2
TRAPPC9-205ENST00000518839 OMPP47874 163 aa13.82□□□□□ -0.2
TRAPPC9-205ENST00000518839 CLDN6P56747 220 aa13.82□□□□□ -0.2
TRAPPC9-205ENST00000518839 CSNK2BP67870 215 aa13.82□□□□□ -0.2
TRAPPC9-205ENST00000518839 TUBA4AP68366 448 aa13.82□□□□□ -0.2
TRAPPC9-205ENST00000518839 CD47Q08722 323 aa13.82□□□□□ -0.2
TRAPPC9-205ENST00000518839 SKP2Q13309 424 aa13.82□□□□□ -0.2
TRAPPC9-205ENST00000518839 ALG10BQ5I7T1 473 aa13.82□□□□□ -0.2
TRAPPC9-205ENST00000518839 C6orf141Q5SZD1 244 aa13.82□□□□□ -0.2
TRAPPC9-205ENST00000518839 WBP2NLQ6ICG8 309 aa13.82□□□□□ -0.2
TRAPPC9-205ENST00000518839 RASSF6Q6ZTQ3 369 aa13.82□□□□□ -0.2
TRAPPC9-205ENST00000518839 POGLUT1Q8NBL1 392 aa13.82□□□□□ -0.2
TRAPPC9-205ENST00000518839 TSPAN14Q8NG11 270 aa13.82□□□□□ -0.2
TRAPPC9-205ENST00000518839 TMEM239Q8WW34 195 aa13.82□□□□□ -0.2
TRAPPC9-205ENST00000518839 ZNF566Q969W8 418 aa13.82□□□□□ -0.2
TRAPPC9-205ENST00000518839 FLRT3Q9NZU0 649 aa13.82□□□□□ -0.2
TRAPPC9-205ENST00000518839 MYOTQ9UBF9 498 aa13.82□□□□□ -0.2
TRAPPC9-205ENST00000518839 REV1Q9UBZ9 1251 aa13.82□□□□□ -0.2
TRAPPC9-205ENST00000518839 MED31Q9Y3C7 131 aa13.82□□□□□ -0.2
TRAPPC9-205ENST00000518839 MUC3AQ02505 3323 aa13.81□□□□□ -0.2
TRAPPC9-205ENST00000518839 TRIM64A6NGJ6 449 aa13.81□□□□□ -0.2
TRAPPC9-205ENST00000518839 H3BN98 237 aa13.81□□□□□ -0.2
TRAPPC9-205ENST00000518839 SOCS6O14544 535 aa13.81□□□□□ -0.2
TRAPPC9-205ENST00000518839 OR6B1O95007 311 aa13.81□□□□□ -0.2
TRAPPC9-205ENST00000518839 TNFSF15O95150 251 aa13.81□□□□□ -0.2
TRAPPC9-205ENST00000518839 NADKO95544 446 aaPredicted RBP13.81□□□□□ -0.2
TRAPPC9-205ENST00000518839 EVI2BP34910 448 aa13.81□□□□□ -0.2
TRAPPC9-205ENST00000518839 RNF144AP50876 292 aaPredicted RBP13.81□□□□□ -0.2
TRAPPC9-205ENST00000518839 GABARAPL2P60520 117 aa13.81□□□□□ -0.2
TRAPPC9-205ENST00000518839 CDK5R2Q13319 367 aa13.81□□□□□ -0.2
TRAPPC9-205ENST00000518839 DNASE1L3Q13609 305 aa13.81□□□□□ -0.2
TRAPPC9-205ENST00000518839 APOFQ13790 326 aa13.81□□□□□ -0.2
TRAPPC9-205ENST00000518839 MAD2L1BPQ15013 274 aaPredicted RBP13.81□□□□□ -0.2
TRAPPC9-205ENST00000518839 PTGES3Q15185 160 aaKnown RBP13.81□□□□□ -0.2
TRAPPC9-205ENST00000518839 CD226Q15762 336 aa13.81□□□□□ -0.2
TRAPPC9-205ENST00000518839 KIRREL2Q6UWL6 708 aa13.81□□□□□ -0.2
TRAPPC9-205ENST00000518839 PRICKLE2Q7Z3G6 844 aa13.81□□□□□ -0.2
TRAPPC9-205ENST00000518839 NRMQ8IXM6 262 aa13.81□□□□□ -0.2
TRAPPC9-205ENST00000518839 DND1Q8IYX4 353 aaKnown RBP13.81□□□□□ -0.2
TRAPPC9-205ENST00000518839 CADM2Q8N3J6 435 aa13.81□□□□□ -0.2
TRAPPC9-205ENST00000518839 TMCO5AQ8N6Q1 288 aa13.81□□□□□ -0.2
TRAPPC9-205ENST00000518839 CLDN22Q8N7P3 220 aa13.81□□□□□ -0.2
TRAPPC9-205ENST00000518839 OR11G2Q8NGC1 345 aa13.81□□□□□ -0.2
TRAPPC9-205ENST00000518839 FAM81AQ8TBF8 368 aa13.81□□□□□ -0.2
TRAPPC9-205ENST00000518839 RNF217Q8TC41 542 aa13.81□□□□□ -0.2
TRAPPC9-205ENST00000518839 TMEM255BQ8WV15 326 aa13.81□□□□□ -0.2
TRAPPC9-205ENST00000518839 PRRG3Q9BZD7 231 aa13.81□□□□□ -0.2
TRAPPC9-205ENST00000518839 C12orf10Q9HB07 376 aa13.81□□□□□ -0.2
TRAPPC9-205ENST00000518839 IMPAD1Q9NX62 359 aa13.81□□□□□ -0.2
TRAPPC9-205ENST00000518839 FOXJ2Q9P0K8 574 aa13.81□□□□□ -0.2
TRAPPC9-205ENST00000518839 HEATR5AQ86XA9 2040 aa13.81□□□□□ -0.2
TRAPPC9-205ENST00000518839 A0A1W2PNU3 283 aaPredicted RBP13.8□□□□□ -0.2
TRAPPC9-205ENST00000518839 PMS2P1A4D2B8 440 aa13.8□□□□□ -0.2
TRAPPC9-205ENST00000518839 TMEM200CA6NKL6 621 aa13.8□□□□□ -0.2
TRAPPC9-205ENST00000518839 EIF4E1BA6NMX2 242 aaKnown RBP13.8□□□□□ -0.2
TRAPPC9-205ENST00000518839 STMND1H3BQB6 276 aa13.8□□□□□ -0.2
TRAPPC9-205ENST00000518839 WWP2O00308 870 aa13.8□□□□□ -0.2
TRAPPC9-205ENST00000518839 FADS1O60427 444 aa13.8□□□□□ -0.2
TRAPPC9-205ENST00000518839 RAD1O60671 282 aa13.8□□□□□ -0.2
TRAPPC9-205ENST00000518839 ANGPTL1O95841 491 aa13.8□□□□□ -0.2
TRAPPC9-205ENST00000518839 CLPTM1O96005 669 aa13.8□□□□□ -0.2
TRAPPC9-205ENST00000518839 HPP00738 406 aa13.8□□□□□ -0.2
TRAPPC9-205ENST00000518839 SMIM18P0DKX4 95 aa13.8□□□□□ -0.2
TRAPPC9-205ENST00000518839 PNMTP11086 282 aa13.8□□□□□ -0.2
TRAPPC9-205ENST00000518839 EPHA2P29317 976 aa13.8□□□□□ -0.2
TRAPPC9-205ENST00000518839 HLCSP50747 726 aa13.8□□□□□ -0.2
TRAPPC9-205ENST00000518839 PRKCDQ05655 676 aa13.8□□□□□ -0.2
TRAPPC9-205ENST00000518839 MEP1AQ16819 746 aa13.8□□□□□ -0.2
TRAPPC9-205ENST00000518839 SLX4IPQ5VYV7 408 aa13.8□□□□□ -0.2
TRAPPC9-205ENST00000518839 RPL13AP3Q6NVV1 102 aa13.8□□□□□ -0.2
TRAPPC9-205ENST00000518839 APOOLQ6UXV4 268 aa13.8□□□□□ -0.2
TRAPPC9-205ENST00000518839 GATSQ8NAP1 163 aa13.8□□□□□ -0.2
TRAPPC9-205ENST00000518839 TEX47Q8TBZ9 253 aa13.8□□□□□ -0.2
TRAPPC9-205ENST00000518839 GRHL3Q8TE85 626 aa13.8□□□□□ -0.2
TRAPPC9-205ENST00000518839 FAM46AQ96IP4 442 aaKnown RBP13.8□□□□□ -0.2
TRAPPC9-205ENST00000518839 MESP1Q9BRJ9 268 aa13.8□□□□□ -0.2
TRAPPC9-205ENST00000518839 ZNF426Q9BUY5 554 aa13.8□□□□□ -0.2
TRAPPC9-205ENST00000518839 TEX12Q9BXU0 123 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 155.1 ms