RNA–Protein interactions for RNA: ENST00000515035.5

TCOF1-214, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 2

Gene TCOF1, Length 5,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-214ENST00000515035 SDR9C7Q8NEX9 313 aa12.51□□□□□ -0.41
TCOF1-214ENST00000515035 SLC2A12Q8TD20 617 aa12.51□□□□□ -0.41
TCOF1-214ENST00000515035 RNF128Q8TEB7 428 aa12.51□□□□□ -0.41
TCOF1-214ENST00000515035 PPP4R1LQ9P1A2 415 aa12.51□□□□□ -0.41
TCOF1-214ENST00000515035 H3BUI4 141 aa12.51□□□□□ -0.41
TCOF1-214ENST00000515035 PPP6CO00743 305 aa12.51□□□□□ -0.41
TCOF1-214ENST00000515035 TP53I11O14683 189 aa12.51□□□□□ -0.41
TCOF1-214ENST00000515035 P2RX6O15547 441 aa12.51□□□□□ -0.41
TCOF1-214ENST00000515035 VEGFDO43915 354 aa12.51□□□□□ -0.41
TCOF1-214ENST00000515035 PSMB1P20618 241 aaKnown RBP12.51□□□□□ -0.41
TCOF1-214ENST00000515035 GCAP28676 217 aa12.51□□□□□ -0.41
TCOF1-214ENST00000515035 POLR2IP36954 125 aaKnown RBP12.51□□□□□ -0.41
TCOF1-214ENST00000515035 ETV5P41161 510 aa12.51□□□□□ -0.41
TCOF1-214ENST00000515035 OR2G6Q5TZ20 316 aa12.51□□□□□ -0.41
TCOF1-214ENST00000515035 KIAA0319Q5VV43 1072 aa12.51□□□□□ -0.41
TCOF1-214ENST00000515035 SPRED1Q7Z699 444 aa12.51□□□□□ -0.41
TCOF1-214ENST00000515035 ENTHD1Q8IYW4 607 aa12.51□□□□□ -0.41
TCOF1-214ENST00000515035 TMEM239Q8WW34 195 aa12.51□□□□□ -0.41
TCOF1-214ENST00000515035 RBPMSQ93062 196 aaKnown RBP12.51□□□□□ -0.41
TCOF1-214ENST00000515035 GCM1Q9NP62 436 aa12.51□□□□□ -0.41
TCOF1-214ENST00000515035 KIF25Q9UIL4 384 aa12.51□□□□□ -0.41
TCOF1-214ENST00000515035 C4BP0C0L5 1744 aa12.51□□□□□ -0.41
TCOF1-214ENST00000515035 NUMA1Q14980 2115 aa12.51□□□□□ -0.41
TCOF1-214ENST00000515035 ARFGEF2Q9Y6D5 1785 aa12.51□□□□□ -0.41
TCOF1-214ENST00000515035 I6L893 689 aaPredicted RBP12.51□□□□□ -0.41
TCOF1-214ENST00000515035 GABRPO00591 440 aa12.51□□□□□ -0.41
TCOF1-214ENST00000515035 GPR32O75388 356 aa12.51□□□□□ -0.41
TCOF1-214ENST00000515035 PCSK6P29122 969 aa12.51□□□□□ -0.41
TCOF1-214ENST00000515035 MRPL49Q13405 166 aaKnown RBP12.51□□□□□ -0.41
TCOF1-214ENST00000515035 MLC1Q15049 377 aa12.51□□□□□ -0.41
TCOF1-214ENST00000515035 DUSP7Q16829 419 aa12.51□□□□□ -0.41
TCOF1-214ENST00000515035 KDELC1Q6UW63 502 aa12.51□□□□□ -0.41
TCOF1-214ENST00000515035 GPR155Q7Z3F1 870 aa12.51□□□□□ -0.41
TCOF1-214ENST00000515035 MFSD6LQ8IWD5 586 aa12.51□□□□□ -0.41
TCOF1-214ENST00000515035 NPRL2Q8WTW4 380 aa12.51□□□□□ -0.41
TCOF1-214ENST00000515035 TXNDC15Q96J42 360 aa12.51□□□□□ -0.41
TCOF1-214ENST00000515035 PELOQ9BRX2 385 aaKnown RBP12.51□□□□□ -0.41
TCOF1-214ENST00000515035 KCNIP1Q9NZI2 227 aa12.51□□□□□ -0.41
TCOF1-214ENST00000515035 SCGB1D1O95968 90 aa12.5□□□□□ -0.41
TCOF1-214ENST00000515035 UBE2KP61086 200 aa12.5□□□□□ -0.41
TCOF1-214ENST00000515035 RPS15AP62244 130 aaKnown RBP12.5□□□□□ -0.41
TCOF1-214ENST00000515035 FCN2Q15485 313 aa12.5□□□□□ -0.41
TCOF1-214ENST00000515035 PHF19Q5T6S3 580 aa12.5□□□□□ -0.41
TCOF1-214ENST00000515035 Q6ZPB1 254 aaPredicted RBP12.5□□□□□ -0.41
TCOF1-214ENST00000515035 ZFP82Q8N141 532 aa12.5□□□□□ -0.41
TCOF1-214ENST00000515035 OR6V1Q8N148 313 aa12.5□□□□□ -0.41
TCOF1-214ENST00000515035 PRRC1Q96M27 445 aa12.5□□□□□ -0.41
TCOF1-214ENST00000515035 NICN1Q9BSH3 213 aa12.5□□□□□ -0.41
TCOF1-214ENST00000515035 MVB12BQ9H7P6 319 aa12.5□□□□□ -0.41
TCOF1-214ENST00000515035 ACKR4Q9NPB9 350 aa12.5□□□□□ -0.41
TCOF1-214ENST00000515035 GMEB2Q9UKD1 530 aa12.5□□□□□ -0.41
TCOF1-214ENST00000515035 TMPRSS11EQ9UL52 423 aa12.5□□□□□ -0.41
TCOF1-214ENST00000515035 PUS1Q9Y606 427 aaKnown RBP eCLIP12.5□□□□□ -0.41
TCOF1-214ENST00000515035 ANTXRLA6NF34 631 aa12.5□□□□□ -0.41
TCOF1-214ENST00000515035 A6NL46 340 aa12.5□□□□□ -0.41
TCOF1-214ENST00000515035 GSRP00390 522 aa12.5□□□□□ -0.41
TCOF1-214ENST00000515035 CX3CR1P49238 355 aa12.5□□□□□ -0.41
TCOF1-214ENST00000515035 PSPHP78330 225 aa12.5□□□□□ -0.41
TCOF1-214ENST00000515035 TDGQ13569 410 aa12.5□□□□□ -0.41
TCOF1-214ENST00000515035 RBM39Q14498 530 aaKnown RBP12.5□□□□□ -0.41
TCOF1-214ENST00000515035 TPRA1Q86W33 373 aa12.5□□□□□ -0.41
TCOF1-214ENST00000515035 CSNK1A1LQ8N752 337 aa12.5□□□□□ -0.41
TCOF1-214ENST00000515035 TEX19Q8NA77 164 aa12.5□□□□□ -0.41
TCOF1-214ENST00000515035 TMEM163Q8TC26 289 aa12.5□□□□□ -0.41
TCOF1-214ENST00000515035 DAZLQ92904 295 aaKnown RBP12.5□□□□□ -0.41
TCOF1-214ENST00000515035 OR1A2Q9Y585 309 aa12.5□□□□□ -0.41
TCOF1-214ENST00000515035 NCR1O76036 304 aa12.5□□□□□ -0.41
TCOF1-214ENST00000515035 HEXBP07686 556 aa12.5□□□□□ -0.41
TCOF1-214ENST00000515035 HOXB5P09067 269 aa12.5□□□□□ -0.41
TCOF1-214ENST00000515035 APEX1P27695 318 aaKnown RBP12.5□□□□□ -0.41
TCOF1-214ENST00000515035 AHRP35869 848 aa12.5□□□□□ -0.41
TCOF1-214ENST00000515035 IRF4Q15306 451 aa12.5□□□□□ -0.41
TCOF1-214ENST00000515035 TMEM41BQ5BJD5 291 aa12.5□□□□□ -0.41
TCOF1-214ENST00000515035 BPIFB2Q8N4F0 458 aa12.5□□□□□ -0.41
TCOF1-214ENST00000515035 OR51D1Q8NGF3 324 aa12.5□□□□□ -0.41
TCOF1-214ENST00000515035 THAP3Q8WTV1 239 aaPredicted RBP12.5□□□□□ -0.41
TCOF1-214ENST00000515035 FAM71F1Q96KD3 344 aaPredicted RBP12.5□□□□□ -0.41
TCOF1-214ENST00000515035 SERTAD4Q9NUC0 356 aa12.5□□□□□ -0.41
TCOF1-214ENST00000515035 ADAMTS5Q9UNA0 930 aa12.5□□□□□ -0.41
TCOF1-214ENST00000515035 KLK4Q9Y5K2 254 aa12.5□□□□□ -0.41
TCOF1-214ENST00000515035 FAM183AA6NL82 134 aa12.5□□□□□ -0.41
TCOF1-214ENST00000515035 VSTM2BA6NLU5 285 aa12.5□□□□□ -0.41
TCOF1-214ENST00000515035 HHLA1C9JL84 531 aa12.5□□□□□ -0.41
TCOF1-214ENST00000515035 SDC3O75056 442 aa12.5□□□□□ -0.41
TCOF1-214ENST00000515035 FZD7O75084 574 aa12.5□□□□□ -0.41
TCOF1-214ENST00000515035 SLC43A1O75387 559 aa12.5□□□□□ -0.41
TCOF1-214ENST00000515035 TP53P04637 393 aaPredicted RBP12.5□□□□□ -0.41
TCOF1-214ENST00000515035 RAB40ALP0C0E4 278 aa12.5□□□□□ -0.41
TCOF1-214ENST00000515035 ACP2P11117 423 aa12.5□□□□□ -0.41
TCOF1-214ENST00000515035 SERPINF1P36955 418 aa12.5□□□□□ -0.41
TCOF1-214ENST00000515035 RAB31Q13636 194 aa12.5□□□□□ -0.41
TCOF1-214ENST00000515035 LRRC26Q2I0M4 334 aa12.5□□□□□ -0.41
TCOF1-214ENST00000515035 TMPPEQ6ZT21 453 aa12.5□□□□□ -0.41
TCOF1-214ENST00000515035 OR4F15Q8NGB8 312 aa12.5□□□□□ -0.41
TCOF1-214ENST00000515035 RAB40AQ8WXH6 277 aa12.5□□□□□ -0.41
TCOF1-214ENST00000515035 METTL2AQ96IZ6 378 aaKnown RBP12.5□□□□□ -0.41
TCOF1-214ENST00000515035 LRIG1Q96JA1 1093 aa12.5□□□□□ -0.41
TCOF1-214ENST00000515035 BMFQ96LC9 184 aa12.5□□□□□ -0.41
TCOF1-214ENST00000515035 FIZ1Q96SL8 496 aa12.5□□□□□ -0.41
TCOF1-214ENST00000515035 CENPOQ9BU64 300 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms