RNA–Protein interactions for RNA: ENST00000513562.1

DDX41-216, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-216ENST00000513562 OR4F21O95013 312 aa9.6□□□□□ -0.87
DDX41-216ENST00000513562 KRT6AP02538 564 aa9.6□□□□□ -0.87
DDX41-216ENST00000513562 KRT6BP04259 564 aa9.6□□□□□ -0.87
DDX41-216ENST00000513562 RBP1P09455 135 aa9.6□□□□□ -0.87
DDX41-216ENST00000513562 NTSP30990 170 aa9.6□□□□□ -0.87
DDX41-216ENST00000513562 APOBEC3AP31941 199 aaPredicted RBP9.6□□□□□ -0.87
DDX41-216ENST00000513562 KRT6CP48668 564 aa9.6□□□□□ -0.87
DDX41-216ENST00000513562 SERPINB8P50452 374 aa9.6□□□□□ -0.87
DDX41-216ENST00000513562 CDH13P55290 713 aa9.6□□□□□ -0.87
DDX41-216ENST00000513562 PHC1P78364 1004 aa9.6□□□□□ -0.87
DDX41-216ENST00000513562 CHRNEQ04844 493 aa9.6□□□□□ -0.87
DDX41-216ENST00000513562 ACSM2AQ08AH3 577 aa9.6□□□□□ -0.87
DDX41-216ENST00000513562 RASGEF1BQ0VAM2 473 aa9.6□□□□□ -0.87
DDX41-216ENST00000513562 TRADDQ15628 312 aa9.6□□□□□ -0.87
DDX41-216ENST00000513562 ZSWIM7Q19AV6 140 aa9.6□□□□□ -0.87
DDX41-216ENST00000513562 SWI5Q1ZZU3 235 aa9.6□□□□□ -0.87
DDX41-216ENST00000513562 MST1LQ2TV78 715 aa9.6□□□□□ -0.87
DDX41-216ENST00000513562 VPS26BQ4G0F5 336 aa9.6□□□□□ -0.87
DDX41-216ENST00000513562 IQCCQ4KMZ1 466 aa9.6□□□□□ -0.87
DDX41-216ENST00000513562 PDLIM3Q53GG5 364 aaPredicted RBP9.6□□□□□ -0.87
DDX41-216ENST00000513562 FBXW9Q5XUX1 488 aa9.6□□□□□ -0.87
DDX41-216ENST00000513562 ACSM2BQ68CK6 577 aa9.6□□□□□ -0.87
DDX41-216ENST00000513562 GALNT5Q7Z7M9 940 aa9.6□□□□□ -0.87
DDX41-216ENST00000513562 CREG2Q8IUH2 290 aa9.6□□□□□ -0.87
DDX41-216ENST00000513562 C3orf56Q8N813 242 aa9.6□□□□□ -0.87
DDX41-216ENST00000513562 ZNF540Q8NDQ6 660 aa9.6□□□□□ -0.87
DDX41-216ENST00000513562 FBXO27Q8NI29 283 aa9.6□□□□□ -0.87
DDX41-216ENST00000513562 ZNF300Q96RE9 604 aaPredicted RBP9.6□□□□□ -0.87
DDX41-216ENST00000513562 TRMOQ9BU70 441 aa9.6□□□□□ -0.87
DDX41-216ENST00000513562 C1QTNF3Q9BXJ4 246 aa9.6□□□□□ -0.87
DDX41-216ENST00000513562 UBQLN4Q9NRR5 601 aa9.6□□□□□ -0.87
DDX41-216ENST00000513562 NTMQ9P121 344 aa9.6□□□□□ -0.87
DDX41-216ENST00000513562 ATP23Q9Y6H3 246 aa9.6□□□□□ -0.87
DDX41-216ENST00000513562 CADP27708 2225 aa9.6□□□□□ -0.87
DDX41-216ENST00000513562 FREM1Q5H8C1 2179 aa9.6□□□□□ -0.87
DDX41-216ENST00000513562 A0A1W2PR80 420 aa9.59□□□□□ -0.87
DDX41-216ENST00000513562 TMEM89A2RUT3 159 aa9.59□□□□□ -0.87
DDX41-216ENST00000513562 FAM157AC9JC47 383 aa9.59□□□□□ -0.87
DDX41-216ENST00000513562 C9JVG2 144 aa9.59□□□□□ -0.87
DDX41-216ENST00000513562 CCDC188H7C350 402 aa9.59□□□□□ -0.87
DDX41-216ENST00000513562 SCDO00767 359 aa9.59□□□□□ -0.87
DDX41-216ENST00000513562 KCNK2O95069 426 aa9.59□□□□□ -0.87
DDX41-216ENST00000513562 ANXA4P09525 319 aaPredicted RBP9.59□□□□□ -0.87
DDX41-216ENST00000513562 HPGDP15428 266 aa9.59□□□□□ -0.87
DDX41-216ENST00000513562 TYK2P29597 1187 aa9.59□□□□□ -0.87
DDX41-216ENST00000513562 LCN1P31025 176 aa9.59□□□□□ -0.87
DDX41-216ENST00000513562 ACTG1P63261 375 aa9.59□□□□□ -0.87
DDX41-216ENST00000513562 ZNF117Q03924 483 aa9.59□□□□□ -0.87
DDX41-216ENST00000513562 ZNF763Q0D2J5 394 aa9.59□□□□□ -0.87
DDX41-216ENST00000513562 CALCOCO2Q13137 446 aa9.59□□□□□ -0.87
DDX41-216ENST00000513562 CARTPTQ16568 116 aa9.59□□□□□ -0.87
DDX41-216ENST00000513562 PRR31Q5SQ13 230 aa9.59□□□□□ -0.87
DDX41-216ENST00000513562 FAM71E1Q6IPT2 247 aa9.59□□□□□ -0.87
DDX41-216ENST00000513562 ZNF100Q8IYN0 542 aa9.59□□□□□ -0.87
DDX41-216ENST00000513562 MMGT1Q8N4V1 131 aa9.59□□□□□ -0.87
DDX41-216ENST00000513562 CDRT4Q8N9R6 151 aa9.59□□□□□ -0.87
DDX41-216ENST00000513562 OR6Y1Q8NGX8 325 aa9.59□□□□□ -0.87
DDX41-216ENST00000513562 PUM2Q8TB72 1066 aaKnown RBP eCLIP9.59□□□□□ -0.87
DDX41-216ENST00000513562 ZNF775Q96BV0 537 aaPredicted RBP9.59□□□□□ -0.87
DDX41-216ENST00000513562 VPS11Q9H270 941 aa9.59□□□□□ -0.87
DDX41-216ENST00000513562 FKRPQ9H9S5 495 aa9.59□□□□□ -0.87
DDX41-216ENST00000513562 EQTNQ9NQ60 294 aa9.59□□□□□ -0.87
DDX41-216ENST00000513562 MIEF1Q9NQG6 463 aa9.59□□□□□ -0.87
DDX41-216ENST00000513562 SIRT5Q9NXA8 310 aa9.59□□□□□ -0.87
DDX41-216ENST00000513562 METRNQ9UJH8 293 aa9.59□□□□□ -0.87
DDX41-216ENST00000513562 TRAF6Q9Y4K3 522 aa9.59□□□□□ -0.87
DDX41-216ENST00000513562 ACTL7BQ9Y614 415 aa9.59□□□□□ -0.87
DDX41-216ENST00000513562 GPC6Q9Y625 555 aaPredicted RBP9.59□□□□□ -0.87
DDX41-216ENST00000513562 YLPM1P49750 1951 aaKnown RBP9.59□□□□□ -0.87
DDX41-216ENST00000513562 MALRD1Q5VYJ5 2156 aa9.58□□□□□ -0.88
DDX41-216ENST00000513562 TGP01266 2768 aa9.58□□□□□ -0.88
DDX41-216ENST00000513562 GIMAP1-GIMAP5A0A087WTJ2 511 aa9.58□□□□□ -0.88
DDX41-216ENST00000513562 A0A1W2PNR3 127 aa9.58□□□□□ -0.88
DDX41-216ENST00000513562 CIB4A0PJX0 185 aa9.58□□□□□ -0.88
DDX41-216ENST00000513562 LRP5LA4QPB2 252 aa9.58□□□□□ -0.88
DDX41-216ENST00000513562 ULK1O75385 1050 aa9.58□□□□□ -0.88
DDX41-216ENST00000513562 PRPS2P11908 318 aa9.58□□□□□ -0.88
DDX41-216ENST00000513562 SLC7A1P30825 629 aa9.58□□□□□ -0.88
DDX41-216ENST00000513562 IL2RGP31785 369 aa9.58□□□□□ -0.88
DDX41-216ENST00000513562 HSD17B3P37058 310 aa9.58□□□□□ -0.88
DDX41-216ENST00000513562 MAGEA4P43358 317 aa9.58□□□□□ -0.88
DDX41-216ENST00000513562 MAGEA12P43365 314 aa9.58□□□□□ -0.88
DDX41-216ENST00000513562 HTR6P50406 440 aa9.58□□□□□ -0.88
DDX41-216ENST00000513562 SUMO3P55854 103 aaPredicted RBP9.58□□□□□ -0.88
DDX41-216ENST00000513562 SNRPD2P62316 118 aaKnown RBP9.58□□□□□ -0.88
DDX41-216ENST00000513562 CLCQ05315 142 aa9.58□□□□□ -0.88
DDX41-216ENST00000513562 C2orf80Q0P641 193 aa9.58□□□□□ -0.88
DDX41-216ENST00000513562 SELENBP1Q13228 472 aa9.58□□□□□ -0.88
DDX41-216ENST00000513562 RASA2Q15283 850 aa9.58□□□□□ -0.88
DDX41-216ENST00000513562 GABRA6Q16445 453 aa9.58□□□□□ -0.88
DDX41-216ENST00000513562 CBLN3Q6UW01 205 aa9.58□□□□□ -0.88
DDX41-216ENST00000513562 DEF8Q6ZN54 512 aa9.58□□□□□ -0.88
DDX41-216ENST00000513562 LINC01356Q8N9X3 169 aa9.58□□□□□ -0.88
DDX41-216ENST00000513562 CDC26Q8NHZ8 85 aa9.58□□□□□ -0.88
DDX41-216ENST00000513562 HPS1Q92902 700 aa9.58□□□□□ -0.88
DDX41-216ENST00000513562 FBXO17Q96EF6 278 aa9.58□□□□□ -0.88
DDX41-216ENST00000513562 GIMAP5Q96F15 307 aa9.58□□□□□ -0.88
DDX41-216ENST00000513562 MRGPRX4Q96LA9 322 aa9.58□□□□□ -0.88
DDX41-216ENST00000513562 MUS81Q96NY9 551 aa9.58□□□□□ -0.88
DDX41-216ENST00000513562 ZNF382Q96SR6 550 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms