RNA–Protein interactions for RNA: ENST00000512909.1

HTT-210, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 611 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-210ENST00000512909 TTC31Q49AM3 519 aaPredicted RBP3.54□□□□□ -1.84
HTT-210ENST00000512909 PTPN20Q4JDL3 420 aa3.54□□□□□ -1.84
HTT-210ENST00000512909 N4BP2L1Q5TBK1 243 aaPredicted RBP3.54□□□□□ -1.84
HTT-210ENST00000512909 TMEM215Q68D42 235 aa3.54□□□□□ -1.84
HTT-210ENST00000512909 RTL6Q6ICC9 239 aa3.54□□□□□ -1.84
HTT-210ENST00000512909 DNAJC24Q6P3W2 148 aa3.54□□□□□ -1.84
HTT-210ENST00000512909 DOK6Q6PKX4 331 aa3.54□□□□□ -1.84
HTT-210ENST00000512909 C3P1Q6ZMU1 363 aa3.54□□□□□ -1.84
HTT-210ENST00000512909 Q6ZRP5 223 aa3.54□□□□□ -1.84
HTT-210ENST00000512909 CYP4V2Q6ZWL3 525 aaPredicted RBP3.54□□□□□ -1.84
HTT-210ENST00000512909 LUZP1Q86V48 1076 aa3.54□□□□□ -1.84
HTT-210ENST00000512909 FAM131BQ86XD5 332 aa3.54□□□□□ -1.84
HTT-210ENST00000512909 ZFAND4Q86XD8 727 aa3.54□□□□□ -1.84
HTT-210ENST00000512909 ZNF677Q86XU0 584 aa3.54□□□□□ -1.84
HTT-210ENST00000512909 DND1Q8IYX4 353 aaKnown RBP3.54□□□□□ -1.84
HTT-210ENST00000512909 STK40Q8N2I9 435 aa3.54□□□□□ -1.84
HTT-210ENST00000512909 FBXW8Q8N3Y1 598 aa3.54□□□□□ -1.84
HTT-210ENST00000512909 AQP11Q8NBQ7 271 aa3.54□□□□□ -1.84
HTT-210ENST00000512909 DEFB124Q8NES8 71 aa3.54□□□□□ -1.84
HTT-210ENST00000512909 OR6F1Q8NGZ6 308 aa3.54□□□□□ -1.84
HTT-210ENST00000512909 OR2T3Q8NH03 318 aa3.54□□□□□ -1.84
HTT-210ENST00000512909 WFDC5Q8TCV5 224 aa3.54□□□□□ -1.84
HTT-210ENST00000512909 GPR148Q8TDV2 347 aa3.54□□□□□ -1.84
HTT-210ENST00000512909 KLK6Q92876 244 aa3.54□□□□□ -1.84
HTT-210ENST00000512909 CXorf58Q96LI9 332 aa3.54□□□□□ -1.84
HTT-210ENST00000512909 NAP1L5Q96NT1 182 aaPredicted RBP3.54□□□□□ -1.84
HTT-210ENST00000512909 FEM1AQ9BSK4 669 aa3.54□□□□□ -1.84
HTT-210ENST00000512909 LRRC61Q9BV99 259 aa3.54□□□□□ -1.84
HTT-210ENST00000512909 NEUROG2Q9H2A3 272 aa3.54□□□□□ -1.84
HTT-210ENST00000512909 DCLRE1BQ9H816 532 aa3.54□□□□□ -1.84
HTT-210ENST00000512909 ELL3Q9HB65 397 aaPredicted RBP3.54□□□□□ -1.84
HTT-210ENST00000512909 PRSS16Q9NQE7 514 aa3.54□□□□□ -1.84
HTT-210ENST00000512909 PIGVQ9NUD9 493 aa3.54□□□□□ -1.84
HTT-210ENST00000512909 ERVK-18Q9QC07 812 aa3.54□□□□□ -1.84
HTT-210ENST00000512909 EIF3KQ9UBQ5 218 aaKnown RBP3.54□□□□□ -1.84
HTT-210ENST00000512909 OR12D3Q9UGF7 316 aa3.54□□□□□ -1.84
HTT-210ENST00000512909 PCSK1NQ9UHG2 260 aa3.54□□□□□ -1.84
HTT-210ENST00000512909 OR1A2Q9Y585 309 aa3.54□□□□□ -1.84
HTT-210ENST00000512909 PRSS21Q9Y6M0 314 aa3.54□□□□□ -1.84
HTT-210ENST00000512909 TRANK1O15050 2925 aa3.54□□□□□ -1.84
HTT-210ENST00000512909 SPAARA0A1B0GVQ0 90 aa3.53□□□□□ -1.84
HTT-210ENST00000512909 TMEM110-MUSTN1A8MSY1 372 aa3.53□□□□□ -1.84
HTT-210ENST00000512909 E9PAM4 449 aa3.53□□□□□ -1.84
HTT-210ENST00000512909 F8VZ95 297 aa3.53□□□□□ -1.84
HTT-210ENST00000512909 NPIPB9F8W1W9 429 aa3.53□□□□□ -1.84
HTT-210ENST00000512909 K7ERQ8 282 aa3.53□□□□□ -1.84
HTT-210ENST00000512909 KPNA3O00505 521 aaPredicted RBP3.53□□□□□ -1.84
HTT-210ENST00000512909 CHEK1O14757 476 aa3.53□□□□□ -1.84
HTT-210ENST00000512909 SLC31A1O15431 190 aa3.53□□□□□ -1.84
HTT-210ENST00000512909 CFLARO15519 480 aa3.53□□□□□ -1.84
HTT-210ENST00000512909 SNAP91O60641 907 aa3.53□□□□□ -1.84
HTT-210ENST00000512909 LRP3O75074 770 aa3.53□□□□□ -1.84
HTT-210ENST00000512909 CLDN11O75508 207 aa3.53□□□□□ -1.84
HTT-210ENST00000512909 ANXA9O76027 345 aa3.53□□□□□ -1.84
HTT-210ENST00000512909 NEBLO76041 1014 aa3.53□□□□□ -1.84
HTT-210ENST00000512909 OR6A2O95222 327 aa3.53□□□□□ -1.84
HTT-210ENST00000512909 SEMA4FO95754 770 aa3.53□□□□□ -1.84
HTT-210ENST00000512909 LSM8O95777 96 aaKnown RBP3.53□□□□□ -1.84
HTT-210ENST00000512909 EPOP01588 193 aa3.53□□□□□ -1.84
HTT-210ENST00000512909 CALB1P05937 261 aa3.53□□□□□ -1.84
HTT-210ENST00000512909 GSTA1P08263 222 aa3.53□□□□□ -1.84
HTT-210ENST00000512909 PLEKP08567 350 aaPredicted RBP3.53□□□□□ -1.84
HTT-210ENST00000512909 SERPINF2P08697 491 aa3.53□□□□□ -1.84
HTT-210ENST00000512909 ZSCAN5DPP0CG00 497 aa3.53□□□□□ -1.84
HTT-210ENST00000512909 UGT1A6P19224 532 aa3.53□□□□□ -1.84
HTT-210ENST00000512909 PSMA2P25787 234 aa3.53□□□□□ -1.84
HTT-210ENST00000512909 RPL34P49207 117 aaKnown RBP3.53□□□□□ -1.84
HTT-210ENST00000512909 CDH4P55283 916 aa3.53□□□□□ -1.84
HTT-210ENST00000512909 GSCP56915 257 aaPredicted RBP3.53□□□□□ -1.84
HTT-210ENST00000512909 SRPXP78539 464 aa3.53□□□□□ -1.84
HTT-210ENST00000512909 IL9RQ01113 521 aa3.53□□□□□ -1.84
HTT-210ENST00000512909 RAD51Q06609 339 aa3.53□□□□□ -1.84
HTT-210ENST00000512909 CST6Q15828 149 aa3.53□□□□□ -1.84
HTT-210ENST00000512909 CCDC14Q49A88 953 aa3.53□□□□□ -1.84
HTT-210ENST00000512909 BRMS1LQ5PSV4 323 aa3.53□□□□□ -1.84
HTT-210ENST00000512909 WDR59Q6PJI9 974 aa3.53□□□□□ -1.84
HTT-210ENST00000512909 NHLRC1Q6VVB1 395 aa3.53□□□□□ -1.84
HTT-210ENST00000512909 RABEPKQ7Z6M1 372 aa3.53□□□□□ -1.84
HTT-210ENST00000512909 VPS36Q86VN1 386 aa3.53□□□□□ -1.84
HTT-210ENST00000512909 SERPINA12Q8IW75 414 aa3.53□□□□□ -1.84
HTT-210ENST00000512909 BANPQ8N9N5 519 aa3.53□□□□□ -1.84
HTT-210ENST00000512909 CLEC1AQ8NC01 280 aa3.53□□□□□ -1.84
HTT-210ENST00000512909 OR6M1Q8NGM8 313 aa3.53□□□□□ -1.84
HTT-210ENST00000512909 OR4A16Q8NH70 328 aa3.53□□□□□ -1.84
HTT-210ENST00000512909 JOSD2Q8TAC2 188 aa3.53□□□□□ -1.84
HTT-210ENST00000512909 FAM172AQ8WUF8 416 aa3.53□□□□□ -1.84
HTT-210ENST00000512909 UBTD2Q8WUN7 234 aa3.53□□□□□ -1.84
HTT-210ENST00000512909 PCNPQ8WW12 178 aaKnown RBP3.53□□□□□ -1.84
HTT-210ENST00000512909 OR8D1Q8WZ84 308 aa3.53□□□□□ -1.84
HTT-210ENST00000512909 ESAMQ96AP7 390 aa3.53□□□□□ -1.84
HTT-210ENST00000512909 RBM18Q96H35 190 aaKnown RBP3.53□□□□□ -1.84
HTT-210ENST00000512909 SERAC1Q96JX3 654 aa3.53□□□□□ -1.84
HTT-210ENST00000512909 C18orf12Q96KH6 178 aa3.53□□□□□ -1.84
HTT-210ENST00000512909 TNFRSF13CQ96RJ3 184 aa3.53□□□□□ -1.84
HTT-210ENST00000512909 ERGIC2Q96RQ1 377 aa3.53□□□□□ -1.84
HTT-210ENST00000512909 NPY6RQ99463 290 aa3.53□□□□□ -1.84
HTT-210ENST00000512909 GABRG3Q99928 467 aa3.53□□□□□ -1.84
HTT-210ENST00000512909 SPAG8Q99932 426 aaPredicted RBP3.53□□□□□ -1.84
HTT-210ENST00000512909 OVOL2Q9BRP0 275 aa3.53□□□□□ -1.84
HTT-210ENST00000512909 CHCHD5Q9BSY4 110 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms