RNA–Protein interactions for RNA: ENST00000512372.5

NR1I3-232, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 861 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-232ENST00000512372 TBL1XR1Q9BZK7 514 aa8.33□□□□□ -1.08
NR1I3-232ENST00000512372 UCK2Q9BZX2 261 aa8.33□□□□□ -1.08
NR1I3-232ENST00000512372 SMURF2Q9HAU4 748 aa8.33□□□□□ -1.08
NR1I3-232ENST00000512372 CPNE5Q9HCH3 593 aa8.33□□□□□ -1.08
NR1I3-232ENST00000512372 BATF3Q9NR55 127 aa8.33□□□□□ -1.08
NR1I3-232ENST00000512372 SDHAF3Q9NRP4 125 aa8.33□□□□□ -1.08
NR1I3-232ENST00000512372 RLIMQ9NVW2 624 aa8.33□□□□□ -1.08
NR1I3-232ENST00000512372 SELENONQ9NZV5 590 aa8.33□□□□□ -1.08
NR1I3-232ENST00000512372 NDRG4Q9ULP0 352 aaKnown RBP8.33□□□□□ -1.08
NR1I3-232ENST00000512372 YARS2Q9Y2Z4 477 aaKnown RBP8.33□□□□□ -1.08
NR1I3-232ENST00000512372 A0A087WUU8 490 aa8.32□□□□□ -1.08
NR1I3-232ENST00000512372 LOC100130705A0A1B0GUX0 176 aa8.32□□□□□ -1.08
NR1I3-232ENST00000512372 SPAARA0A1B0GVQ0 90 aa8.32□□□□□ -1.08
NR1I3-232ENST00000512372 TRIM64A6NGJ6 449 aa8.32□□□□□ -1.08
NR1I3-232ENST00000512372 CPSF4LA6NMK7 179 aaKnown RBP8.32□□□□□ -1.08
NR1I3-232ENST00000512372 ETV2O00321 342 aaPredicted RBP8.32□□□□□ -1.08
NR1I3-232ENST00000512372 TP53I11O14683 189 aa8.32□□□□□ -1.08
NR1I3-232ENST00000512372 BCKDKO14874 412 aa8.32□□□□□ -1.08
NR1I3-232ENST00000512372 KLF4O43474 513 aa8.32□□□□□ -1.08
NR1I3-232ENST00000512372 NDUFB5O43674 189 aa8.32□□□□□ -1.08
NR1I3-232ENST00000512372 OR10H3O60404 316 aa8.32□□□□□ -1.08
NR1I3-232ENST00000512372 CDC40O60508 579 aaKnown RBP eCLIP8.32□□□□□ -1.08
NR1I3-232ENST00000512372 ICOSLGO75144 302 aa8.32□□□□□ -1.08
NR1I3-232ENST00000512372 BCAS1O75363 584 aaPredicted RBP8.32□□□□□ -1.08
NR1I3-232ENST00000512372 OR6B1O95007 311 aa8.32□□□□□ -1.08
NR1I3-232ENST00000512372 LIPCP11150 499 aa8.32□□□□□ -1.08
NR1I3-232ENST00000512372 OSMP13725 252 aa8.32□□□□□ -1.08
NR1I3-232ENST00000512372 PGCP20142 388 aa8.32□□□□□ -1.08
NR1I3-232ENST00000512372 PRKACGP22612 351 aa8.32□□□□□ -1.08
NR1I3-232ENST00000512372 HTR3AP46098 478 aa8.32□□□□□ -1.08
NR1I3-232ENST00000512372 YAP1P46937 504 aaKnown RBP8.32□□□□□ -1.08
NR1I3-232ENST00000512372 GSSP48637 474 aa8.32□□□□□ -1.08
NR1I3-232ENST00000512372 NOVA1P51513 510 aaKnown RBP8.32□□□□□ -1.08
NR1I3-232ENST00000512372 CXCR4P61073 352 aa8.32□□□□□ -1.08
NR1I3-232ENST00000512372 GABREP78334 506 aa8.32□□□□□ -1.08
NR1I3-232ENST00000512372 NHLH1Q02575 133 aa8.32□□□□□ -1.08
NR1I3-232ENST00000512372 GUCA2AQ02747 115 aa8.32□□□□□ -1.08
NR1I3-232ENST00000512372 C17orf67Q0P5P2 114 aa8.32□□□□□ -1.08
NR1I3-232ENST00000512372 TSPAN31Q12999 210 aa8.32□□□□□ -1.08
NR1I3-232ENST00000512372 TOP3AQ13472 1001 aaPredicted RBP8.32□□□□□ -1.08
NR1I3-232ENST00000512372 ANKDD1AQ495B1 522 aa8.32□□□□□ -1.08
NR1I3-232ENST00000512372 KCTD21Q4G0X4 260 aa8.32□□□□□ -1.08
NR1I3-232ENST00000512372 WBP2NLQ6ICG8 309 aa8.32□□□□□ -1.08
NR1I3-232ENST00000512372 UGT2A3Q6UWM9 527 aa8.32□□□□□ -1.08
NR1I3-232ENST00000512372 LINC00114Q6XXX2 140 aa8.32□□□□□ -1.08
NR1I3-232ENST00000512372 RASSF6Q6ZTQ3 369 aa8.32□□□□□ -1.08
NR1I3-232ENST00000512372 GDF7Q7Z4P5 450 aa8.32□□□□□ -1.08
NR1I3-232ENST00000512372 THAP5Q7Z6K1 395 aa8.32□□□□□ -1.08
NR1I3-232ENST00000512372 MRGPREQ86SM8 312 aa8.32□□□□□ -1.08
NR1I3-232ENST00000512372 APLFQ8IW19 511 aaPredicted RBP8.32□□□□□ -1.08
NR1I3-232ENST00000512372 CDK20Q8IZL9 346 aa8.32□□□□□ -1.08
NR1I3-232ENST00000512372 HS3ST5Q8IZT8 346 aa8.32□□□□□ -1.08
NR1I3-232ENST00000512372 DEPDC4Q8N2C3 294 aa8.32□□□□□ -1.08
NR1I3-232ENST00000512372 ZNF614Q8N883 585 aa8.32□□□□□ -1.08
NR1I3-232ENST00000512372 AQP11Q8NBQ7 271 aa8.32□□□□□ -1.08
NR1I3-232ENST00000512372 OR52J3Q8NH60 311 aa8.32□□□□□ -1.08
NR1I3-232ENST00000512372 GNPDA2Q8TDQ7 276 aa8.32□□□□□ -1.08
NR1I3-232ENST00000512372 ADAMTS17Q8TE56 1095 aa8.32□□□□□ -1.08
NR1I3-232ENST00000512372 HGDQ93099 445 aa8.32□□□□□ -1.08
NR1I3-232ENST00000512372 ZNF566Q969W8 418 aa8.32□□□□□ -1.08
NR1I3-232ENST00000512372 SPACA9Q96E40 222 aaPredicted RBP8.32□□□□□ -1.08
NR1I3-232ENST00000512372 SGCZQ96LD1 299 aa8.32□□□□□ -1.08
NR1I3-232ENST00000512372 FRMD6Q96NE9 622 aa8.32□□□□□ -1.08
NR1I3-232ENST00000512372 BARD1Q99728 777 aaKnown RBP8.32□□□□□ -1.08
NR1I3-232ENST00000512372 WFDC6Q9BQY6 131 aa8.32□□□□□ -1.08
NR1I3-232ENST00000512372 TMEM43Q9BTV4 400 aa8.32□□□□□ -1.08
NR1I3-232ENST00000512372 PRRG3Q9BZD7 231 aa8.32□□□□□ -1.08
NR1I3-232ENST00000512372 ASCL3Q9NQ33 180 aa8.32□□□□□ -1.08
NR1I3-232ENST00000512372 RPS6KB2Q9UBS0 482 aa8.32□□□□□ -1.08
NR1I3-232ENST00000512372 BLOC1S6Q9UL45 172 aa8.32□□□□□ -1.08
NR1I3-232ENST00000512372 SLC7A7Q9UM01 511 aa8.32□□□□□ -1.08
NR1I3-232ENST00000512372 MAGED1Q9Y5V3 778 aaPredicted RBP8.32□□□□□ -1.08
NR1I3-232ENST00000512372 SEC16AO15027 2179 aa8.32□□□□□ -1.08
NR1I3-232ENST00000512372 VPS13AQ96RL7 3174 aa8.32□□□□□ -1.08
NR1I3-232ENST00000512372 NPIPA5A0A0B4J1W7 369 aa8.31□□□□□ -1.08
NR1I3-232ENST00000512372 IGHV3-20A0A0C4DH32 117 aa8.31□□□□□ -1.08
NR1I3-232ENST00000512372 TEX51A0A1B0GUA7 166 aa8.31□□□□□ -1.08
NR1I3-232ENST00000512372 A0A1B0GWA3 101 aa8.31□□□□□ -1.08
NR1I3-232ENST00000512372 ANKRD33BA6NCL7 494 aa8.31□□□□□ -1.08
NR1I3-232ENST00000512372 CLDN24A6NM45 220 aa8.31□□□□□ -1.08
NR1I3-232ENST00000512372 NPIPA7E9PJI5 369 aa8.31□□□□□ -1.08
NR1I3-232ENST00000512372 GTPBP1O00178 669 aaKnown RBP8.31□□□□□ -1.08
NR1I3-232ENST00000512372 PRKNO60260 465 aaPredicted RBP8.31□□□□□ -1.08
NR1I3-232ENST00000512372 MRPS14O60783 128 aaKnown RBP8.31□□□□□ -1.08
NR1I3-232ENST00000512372 LYPD3O95274 346 aa8.31□□□□□ -1.08
NR1I3-232ENST00000512372 LYNP07948 512 aa8.31□□□□□ -1.08
NR1I3-232ENST00000512372 LINGO3P0C6S8 592 aa8.31□□□□□ -1.08
NR1I3-232ENST00000512372 CCDC159P0C7I6 412 aa8.31□□□□□ -1.08
NR1I3-232ENST00000512372 UBTFL6P0CB48 400 aaPredicted RBP8.31□□□□□ -1.08
NR1I3-232ENST00000512372 NPIPA8P0DM63 369 aa8.31□□□□□ -1.08
NR1I3-232ENST00000512372 FKBP2P26885 142 aaKnown RBP8.31□□□□□ -1.08
NR1I3-232ENST00000512372 HTR2AP28223 471 aa8.31□□□□□ -1.08
NR1I3-232ENST00000512372 DLSTP36957 453 aa8.31□□□□□ -1.08
NR1I3-232ENST00000512372 SLC1A3P43003 542 aa8.31□□□□□ -1.08
NR1I3-232ENST00000512372 RFX3P48380 749 aa8.31□□□□□ -1.08
NR1I3-232ENST00000512372 P2RX1P51575 399 aa8.31□□□□□ -1.08
NR1I3-232ENST00000512372 MLF1P58340 268 aa8.31□□□□□ -1.08
NR1I3-232ENST00000512372 CBFBQ13951 182 aa8.31□□□□□ -1.08
NR1I3-232ENST00000512372 COL9A2Q14055 689 aaPredicted RBP8.31□□□□□ -1.08
NR1I3-232ENST00000512372 SEC23BQ15437 767 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms