RNA–Protein interactions for RNA: ENST00000512130.5

LINC01088-209, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 3

Gene LINC01088, Length 525 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-209ENST00000512130 CHIT1Q13231 466 aa4.3□□□□□ -1.72
LINC01088-209ENST00000512130 DPYSL3Q14195 570 aa4.3□□□□□ -1.72
LINC01088-209ENST00000512130 GGTA1PQ4G0N0 100 aa4.3□□□□□ -1.72
LINC01088-209ENST00000512130 TMEM52BQ4KMG9 183 aa4.3□□□□□ -1.72
LINC01088-209ENST00000512130 C10orf120Q5SQS8 335 aa4.3□□□□□ -1.72
LINC01088-209ENST00000512130 UFSP1Q6NVU6 142 aa4.3□□□□□ -1.72
LINC01088-209ENST00000512130 ZNF774Q6NX45 483 aa4.3□□□□□ -1.72
LINC01088-209ENST00000512130 FBXL22Q6P050 247 aa4.3□□□□□ -1.72
LINC01088-209ENST00000512130 VITQ6UXI7 678 aa4.3□□□□□ -1.72
LINC01088-209ENST00000512130 CCDC80Q76M96 950 aa4.3□□□□□ -1.72
LINC01088-209ENST00000512130 LCA5Q86VQ0 697 aa4.3□□□□□ -1.72
LINC01088-209ENST00000512130 TPRA1Q86W33 373 aa4.3□□□□□ -1.72
LINC01088-209ENST00000512130 HPS6Q86YV9 775 aa4.3□□□□□ -1.72
LINC01088-209ENST00000512130 SLC38A6Q8IZM9 456 aa4.3□□□□□ -1.72
LINC01088-209ENST00000512130 LINC01561Q8N1V8 128 aa4.3□□□□□ -1.72
LINC01088-209ENST00000512130 GTSF1Q8WW33 167 aa4.3□□□□□ -1.72
LINC01088-209ENST00000512130 EMG1Q92979 244 aaKnown RBP4.3□□□□□ -1.72
LINC01088-209ENST00000512130 AMDHD1Q96NU7 426 aa4.3□□□□□ -1.72
LINC01088-209ENST00000512130 CITED1Q99966 193 aa4.3□□□□□ -1.72
LINC01088-209ENST00000512130 EDEM2Q9BV94 578 aa4.3□□□□□ -1.72
LINC01088-209ENST00000512130 ZNF385DQ9H6B1 395 aa4.3□□□□□ -1.72
LINC01088-209ENST00000512130 LRRC40Q9H9A6 602 aa4.3□□□□□ -1.72
LINC01088-209ENST00000512130 PAK1IP1Q9NWT1 392 aaPredicted RBP4.3□□□□□ -1.72
LINC01088-209ENST00000512130 SMPD3Q9NY59 655 aaPredicted RBP4.3□□□□□ -1.72
LINC01088-209ENST00000512130 COX16Q9P0S2 106 aa4.3□□□□□ -1.72
LINC01088-209ENST00000512130 LCMT1Q9UIC8 334 aa4.3□□□□□ -1.72
LINC01088-209ENST00000512130 PTCH1Q13635 1447 aa4.29□□□□□ -1.72
LINC01088-209ENST00000512130 METTL21EPA6NDL7 271 aa4.29□□□□□ -1.72
LINC01088-209ENST00000512130 G3V4G9 280 aa4.29□□□□□ -1.72
LINC01088-209ENST00000512130 ARPC3O15145 178 aa4.29□□□□□ -1.72
LINC01088-209ENST00000512130 RIPK2O43353 540 aa4.29□□□□□ -1.72
LINC01088-209ENST00000512130 CA1P00915 261 aaPredicted RBP4.29□□□□□ -1.72
LINC01088-209ENST00000512130 DBTP11182 482 aaKnown RBP4.29□□□□□ -1.72
LINC01088-209ENST00000512130 GCFC2P16383 781 aaKnown RBP4.29□□□□□ -1.72
LINC01088-209ENST00000512130 NMT1P30419 496 aaKnown RBP4.29□□□□□ -1.72
LINC01088-209ENST00000512130 YWHABP31946 246 aaKnown RBP4.29□□□□□ -1.72
LINC01088-209ENST00000512130 UGT1A3P35503 534 aa4.29□□□□□ -1.72
LINC01088-209ENST00000512130 LMO4P61968 165 aa4.29□□□□□ -1.72
LINC01088-209ENST00000512130 MRPS11P82912 194 aaKnown RBP4.29□□□□□ -1.72
LINC01088-209ENST00000512130 NCBP1Q09161 790 aaKnown RBP4.29□□□□□ -1.72
LINC01088-209ENST00000512130 SLC10A7Q0GE19 358 aa4.29□□□□□ -1.72
LINC01088-209ENST00000512130 EXOC3L2Q2M3D2 409 aa4.29□□□□□ -1.72
LINC01088-209ENST00000512130 KRTAP27-1Q3LI81 207 aa4.29□□□□□ -1.72
LINC01088-209ENST00000512130 LIPNQ5VXI9 398 aa4.29□□□□□ -1.72
LINC01088-209ENST00000512130 APOBEC3FQ8IUX4 373 aaKnown RBP4.29□□□□□ -1.72
LINC01088-209ENST00000512130 OR51G2Q8NGK0 314 aa4.29□□□□□ -1.72
LINC01088-209ENST00000512130 MS4A14Q96JA4 679 aa4.29□□□□□ -1.72
LINC01088-209ENST00000512130 TGM7Q96PF1 710 aa4.29□□□□□ -1.72
LINC01088-209ENST00000512130 PAXXQ9BUH6 204 aa4.29□□□□□ -1.72
LINC01088-209ENST00000512130 PIPOXQ9P0Z9 390 aa4.29□□□□□ -1.72
LINC01088-209ENST00000512130 WRAP73Q9P2S5 460 aaPredicted RBP4.29□□□□□ -1.72
LINC01088-209ENST00000512130 SPRR3Q9UBC9 169 aa4.29□□□□□ -1.72
LINC01088-209ENST00000512130 PCSK1NQ9UHG2 260 aa4.29□□□□□ -1.72
LINC01088-209ENST00000512130 ZNF107Q9UII5 783 aaPredicted RBP4.29□□□□□ -1.72
LINC01088-209ENST00000512130 KDRP35968 1356 aa4.28□□□□□ -1.72
LINC01088-209ENST00000512130 IGHV2-70DA0A0C4DH43 119 aa4.28□□□□□ -1.72
LINC01088-209ENST00000512130 FRG2CA6NGY1 282 aa4.28□□□□□ -1.72
LINC01088-209ENST00000512130 PP2D1A8MPX8 630 aa4.28□□□□□ -1.72
LINC01088-209ENST00000512130 E7ESA3 106 aa4.28□□□□□ -1.72
LINC01088-209ENST00000512130 GPX5O75715 221 aa4.28□□□□□ -1.72
LINC01088-209ENST00000512130 STSP08842 583 aa4.28□□□□□ -1.72
LINC01088-209ENST00000512130 P2RY4P51582 365 aa4.28□□□□□ -1.72
LINC01088-209ENST00000512130 DSCR10P59022 87 aa4.28□□□□□ -1.72
LINC01088-209ENST00000512130 KRTAP10-9P60411 292 aa4.28□□□□□ -1.72
LINC01088-209ENST00000512130 OC90Q02509 493 aaPredicted RBP4.28□□□□□ -1.72
LINC01088-209ENST00000512130 MAP2K1Q02750 393 aaPredicted RBP4.28□□□□□ -1.72
LINC01088-209ENST00000512130 CENPPQ6IPU0 288 aa4.28□□□□□ -1.72
LINC01088-209ENST00000512130 CGB2Q6NT52 195 aa4.28□□□□□ -1.72
LINC01088-209ENST00000512130 DNM1P46Q6ZS02 220 aa4.28□□□□□ -1.72
LINC01088-209ENST00000512130 GPR65Q8IYL9 337 aa4.28□□□□□ -1.72
LINC01088-209ENST00000512130 UBQLNLQ8IYU4 475 aa4.28□□□□□ -1.72
LINC01088-209ENST00000512130 ZNF525Q8N782 197 aa4.28□□□□□ -1.72
LINC01088-209ENST00000512130 OR4D5Q8NGN0 318 aa4.28□□□□□ -1.72
LINC01088-209ENST00000512130 TCTEX1D2Q8WW35 142 aa4.28□□□□□ -1.72
LINC01088-209ENST00000512130 MAIP1Q8WWC4 291 aa4.28□□□□□ -1.72
LINC01088-209ENST00000512130 SERAC1Q96JX3 654 aa4.28□□□□□ -1.72
LINC01088-209ENST00000512130 SPATA16Q9BXB7 569 aa4.28□□□□□ -1.72
LINC01088-209ENST00000512130 NAT10Q9H0A0 1025 aaKnown RBP4.28□□□□□ -1.72
LINC01088-209ENST00000512130 SMYD3Q9H7B4 428 aa4.28□□□□□ -1.72
LINC01088-209ENST00000512130 APMAPQ9HDC9 416 aa4.28□□□□□ -1.72
LINC01088-209ENST00000512130 SLC17A5Q9NRA2 495 aa4.28□□□□□ -1.72
LINC01088-209ENST00000512130 UFSP2Q9NUQ7 469 aa4.28□□□□□ -1.72
LINC01088-209ENST00000512130 NUDT15Q9NV35 164 aa4.28□□□□□ -1.72
LINC01088-209ENST00000512130 PDE10AQ9Y233 779 aa4.28□□□□□ -1.72
LINC01088-209ENST00000512130 IKBKGQ9Y6K9 419 aa4.28□□□□□ -1.72
LINC01088-209ENST00000512130 IGLV8-61A0A075B6I0 122 aa4.27□□□□□ -1.73
LINC01088-209ENST00000512130 ZNF208O43345 1280 aa4.27□□□□□ -1.73
LINC01088-209ENST00000512130 TSC22D2O75157 780 aa4.27□□□□□ -1.73
LINC01088-209ENST00000512130 ALOX5P09917 674 aa4.27□□□□□ -1.73
LINC01088-209ENST00000512130 PNMTP11086 282 aa4.27□□□□□ -1.73
LINC01088-209ENST00000512130 LAP3P28838 519 aa4.27□□□□□ -1.73
LINC01088-209ENST00000512130 CD80P33681 288 aa4.27□□□□□ -1.73
LINC01088-209ENST00000512130 GCKP35557 465 aa4.27□□□□□ -1.73
LINC01088-209ENST00000512130 LIM2P55344 173 aa4.27□□□□□ -1.73
LINC01088-209ENST00000512130 FGL1Q08830 312 aa4.27□□□□□ -1.73
LINC01088-209ENST00000512130 BEND3Q5T5X7 828 aa4.27□□□□□ -1.73
LINC01088-209ENST00000512130 PAMR1Q6UXH9 720 aa4.27□□□□□ -1.73
LINC01088-209ENST00000512130 Q6ZPB1 254 aaPredicted RBP4.27□□□□□ -1.73
LINC01088-209ENST00000512130 CLEC4FQ8N1N0 589 aa4.27□□□□□ -1.73
LINC01088-209ENST00000512130 OR5L2Q8NGL0 311 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms