RNA–Protein interactions for RNA: ENST00000512107.5

MATR3-238, Transcript of matrin 3, human

TSL 4

Gene MATR3, Length 579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-238	ENST00000512107	B4GALNT2	Q8NHY0	566 aa		13.21	□□□□□ -0.29
MATR3-238	ENST00000512107	C1GALT1C1	Q96EU7	318 aa		13.21	□□□□□ -0.29
MATR3-238	ENST00000512107	ARHGDIG	Q99819	225 aa		13.21	□□□□□ -0.29
MATR3-238	ENST00000512107	ZDHHC11	Q9H8X9	412 aa		13.21	□□□□□ -0.29
MATR3-238	ENST00000512107	NDE1	Q9NXR1	346 aa		13.21	□□□□□ -0.29
MATR3-238	ENST00000512107	TNFRSF10D	Q9UBN6	386 aa		13.21	□□□□□ -0.29
MATR3-238	ENST00000512107	PRPF19	Q9UMS4	504 aa	Known RBP	13.21	□□□□□ -0.29
MATR3-238	ENST00000512107	AP3M1	Q9Y2T2	418 aa		13.21	□□□□□ -0.29
MATR3-238	ENST00000512107	TCRBV5S2	A0A599	114 aa		13.2	□□□□□ -0.3
MATR3-238	ENST00000512107	TMEM247	A6NEH6	219 aa		13.2	□□□□□ -0.3
MATR3-238	ENST00000512107	NPIPA5	E9PKD4	350 aa		13.2	□□□□□ -0.3
MATR3-238	ENST00000512107	SUV39H1	O43463	412 aa		13.2	□□□□□ -0.3
MATR3-238	ENST00000512107	LGI1	O95970	557 aa		13.2	□□□□□ -0.3
MATR3-238	ENST00000512107	SERPINA1	P01009	418 aa		13.2	□□□□□ -0.3
MATR3-238	ENST00000512107	LINGO3	P0C6S8	592 aa		13.2	□□□□□ -0.3
MATR3-238	ENST00000512107	HPGD	P15428	266 aa		13.2	□□□□□ -0.3
MATR3-238	ENST00000512107	PRKAR1B	P31321	381 aa		13.2	□□□□□ -0.3
MATR3-238	ENST00000512107	C17orf67	Q0P5P2	114 aa		13.2	□□□□□ -0.3
MATR3-238	ENST00000512107	GNA13	Q14344	377 aa		13.2	□□□□□ -0.3
MATR3-238	ENST00000512107	NRF1	Q16656	503 aa		13.2	□□□□□ -0.3
MATR3-238	ENST00000512107	TMEM44	Q2T9K0	475 aa		13.2	□□□□□ -0.3
MATR3-238	ENST00000512107	DCST1	Q5T197	706 aa		13.2	□□□□□ -0.3
MATR3-238	ENST00000512107	RNF220	Q5VTB9	566 aa		13.2	□□□□□ -0.3
MATR3-238	ENST00000512107	CYP2R1	Q6VVX0	501 aa		13.2	□□□□□ -0.3
MATR3-238	ENST00000512107	CBLL1	Q75N03	491 aa		13.2	□□□□□ -0.3
MATR3-238	ENST00000512107	TRIL	Q7L0X0	811 aa		13.2	□□□□□ -0.3
MATR3-238	ENST00000512107	EIF3M	Q7L2H7	374 aa	Known RBP	13.2	□□□□□ -0.3
MATR3-238	ENST00000512107	PATL1	Q86TB9	770 aa	Known RBP	13.2	□□□□□ -0.3
MATR3-238	ENST00000512107	ULK2	Q8IYT8	1036 aa		13.2	□□□□□ -0.3
MATR3-238	ENST00000512107	ZNF527	Q8NB42	609 aa		13.2	□□□□□ -0.3
MATR3-238	ENST00000512107	FAM83F	Q8NEG4	500 aa	Predicted RBP	13.2	□□□□□ -0.3
MATR3-238	ENST00000512107	PMM1	Q92871	262 aa		13.2	□□□□□ -0.3
MATR3-238	ENST00000512107	RELT	Q969Z4	430 aa		13.2	□□□□□ -0.3
MATR3-238	ENST00000512107	CCDC124	Q96CT7	223 aa	Known RBP	13.2	□□□□□ -0.3
MATR3-238	ENST00000512107	PINK1	Q9BXM7	581 aa		13.2	□□□□□ -0.3
MATR3-238	ENST00000512107	OR2B2	Q9GZK3	357 aa		13.2	□□□□□ -0.3
MATR3-238	ENST00000512107	MED17	Q9NVC6	651 aa		13.2	□□□□□ -0.3
MATR3-238	ENST00000512107	SPRR3	Q9UBC9	169 aa		13.2	□□□□□ -0.3
MATR3-238	ENST00000512107	SEC14L3	Q9UDX4	400 aa		13.2	□□□□□ -0.3
MATR3-238	ENST00000512107	BOK	Q9UMX3	212 aa	Predicted RBP	13.2	□□□□□ -0.3
MATR3-238	ENST00000512107	NPIPA1	Q9UND3	350 aa		13.2	□□□□□ -0.3
MATR3-238	ENST00000512107	RPH3A	Q9Y2J0	694 aa	Predicted RBP	13.2	□□□□□ -0.3
MATR3-238	ENST00000512107	SLC6A5	Q9Y345	797 aa		13.2	□□□□□ -0.3
MATR3-238	ENST00000512107	SNX13	Q9Y5W8	968 aa		13.2	□□□□□ -0.3
MATR3-238	ENST00000512107	ZNF407	Q9C0G0	2248 aa		13.2	□□□□□ -0.3
MATR3-238	ENST00000512107	SMG1	Q96Q15	3661 aa	Known RBP	13.19	□□□□□ -0.3
MATR3-238	ENST00000512107	KALRN	O60229	2985 aa		13.19	□□□□□ -0.3
MATR3-238	ENST00000512107	ANKUB1	A6NFN9	424 aa		13.19	□□□□□ -0.3
MATR3-238	ENST00000512107	GTPBP1	O00178	669 aa	Known RBP	13.19	□□□□□ -0.3
MATR3-238	ENST00000512107	GSTA4	O15217	222 aa		13.19	□□□□□ -0.3
MATR3-238	ENST00000512107	EIF4E2	O60573	245 aa	Known RBP	13.19	□□□□□ -0.3
MATR3-238	ENST00000512107	LYPD3	O95274	346 aa		13.19	□□□□□ -0.3
MATR3-238	ENST00000512107	THY1	P04216	161 aa		13.19	□□□□□ -0.3
MATR3-238	ENST00000512107	HPN	P05981	417 aa		13.19	□□□□□ -0.3
MATR3-238	ENST00000512107	FES	P07332	822 aa		13.19	□□□□□ -0.3
MATR3-238	ENST00000512107	ME2	P23368	584 aa		13.19	□□□□□ -0.3
MATR3-238	ENST00000512107	PSMA4	P25789	261 aa	Known RBP	13.19	□□□□□ -0.3
MATR3-238	ENST00000512107	GDF1	P27539	372 aa		13.19	□□□□□ -0.3
MATR3-238	ENST00000512107	RYK	P34925	604 aa		13.19	□□□□□ -0.3
MATR3-238	ENST00000512107	OR1E2	P47887	323 aa		13.19	□□□□□ -0.3
MATR3-238	ENST00000512107	ERF	P50548	548 aa		13.19	□□□□□ -0.3
MATR3-238	ENST00000512107	P2RX1	P51575	399 aa		13.19	□□□□□ -0.3
MATR3-238	ENST00000512107	ALDH6A1	Q02252	535 aa	Known RBP	13.19	□□□□□ -0.3
MATR3-238	ENST00000512107	EPS8	Q12929	822 aa		13.19	□□□□□ -0.3
MATR3-238	ENST00000512107	PLPPR5	Q32ZL2	321 aa		13.19	□□□□□ -0.3
MATR3-238	ENST00000512107	DNAL1	Q4LDG9	190 aa		13.19	□□□□□ -0.3
MATR3-238	ENST00000512107	GRAMD2A	Q8IUY3	354 aa		13.19	□□□□□ -0.3
MATR3-238	ENST00000512107	SLC30A8	Q8IWU4	369 aa		13.19	□□□□□ -0.3
MATR3-238	ENST00000512107	LSM14A	Q8ND56	463 aa	Known RBP	13.19	□□□□□ -0.3
MATR3-238	ENST00000512107	OR4K17	Q8NGC6	315 aa		13.19	□□□□□ -0.3
MATR3-238	ENST00000512107	OR6T1	Q8NGN1	323 aa		13.19	□□□□□ -0.3
MATR3-238	ENST00000512107	OR5W2	Q8NH69	310 aa		13.19	□□□□□ -0.3
MATR3-238	ENST00000512107	ZNF607	Q96SK3	696 aa		13.19	□□□□□ -0.3
MATR3-238	ENST00000512107	SLC7A8	Q9UHI5	535 aa		13.19	□□□□□ -0.3
MATR3-238	ENST00000512107	VDAC3	Q9Y277	283 aa		13.19	□□□□□ -0.3
MATR3-238	ENST00000512107	IFT52	Q9Y366	437 aa		13.19	□□□□□ -0.3
MATR3-238	ENST00000512107		V9GYQ6	96 aa		13.19	□□□□□ -0.3
MATR3-238	ENST00000512107	CFAP46	Q8IYW2	2715 aa		13.19	□□□□□ -0.3
MATR3-238	ENST00000512107	ANKRD65	E5RJM6	399 aa		13.18	□□□□□ -0.3
MATR3-238	ENST00000512107	CBR3	O75828	277 aa		13.18	□□□□□ -0.3
MATR3-238	ENST00000512107	TRAPPC6A	O75865	159 aa		13.18	□□□□□ -0.3
MATR3-238	ENST00000512107	ATP5H	O75947	161 aa		13.18	□□□□□ -0.3
MATR3-238	ENST00000512107	SEMG1	P04279	462 aa		13.18	□□□□□ -0.3
MATR3-238	ENST00000512107	ZNF24	P17028	368 aa		13.18	□□□□□ -0.3
MATR3-238	ENST00000512107	HK1	P19367	917 aa		13.18	□□□□□ -0.3
MATR3-238	ENST00000512107	DPP4	P27487	766 aa		13.18	□□□□□ -0.3
MATR3-238	ENST00000512107	SHC1	P29353	583 aa		13.18	□□□□□ -0.3
MATR3-238	ENST00000512107	STAR	P49675	285 aa		13.18	□□□□□ -0.3
MATR3-238	ENST00000512107	CLK3	P49761	638 aa	Known RBP	13.18	□□□□□ -0.3
MATR3-238	ENST00000512107	CCR4	P51679	360 aa		13.18	□□□□□ -0.3
MATR3-238	ENST00000512107	FOXF1	Q12946	379 aa		13.18	□□□□□ -0.3
MATR3-238	ENST00000512107	TRIM25	Q14258	630 aa	Known RBP	13.18	□□□□□ -0.3
MATR3-238	ENST00000512107	LARS2	Q15031	903 aa	Known RBP	13.18	□□□□□ -0.3
MATR3-238	ENST00000512107	QPRT	Q15274	297 aa		13.18	□□□□□ -0.3
MATR3-238	ENST00000512107	INA	Q16352	499 aa		13.18	□□□□□ -0.3
MATR3-238	ENST00000512107	IQCC	Q4KMZ1	466 aa		13.18	□□□□□ -0.3
MATR3-238	ENST00000512107	INTS11	Q5TA45	600 aa	Known RBP	13.18	□□□□□ -0.3
MATR3-238	ENST00000512107	KRT73	Q86Y46	540 aa		13.18	□□□□□ -0.3
MATR3-238	ENST00000512107	CMIP	Q8IY22	773 aa		13.18	□□□□□ -0.3
MATR3-238	ENST00000512107	FAM109A	Q8N4B1	249 aa		13.18	□□□□□ -0.3

Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms