RNA–Protein interactions for RNA: ENST00000510737.1

USP53-206, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 5

Gene USP53, Length 534 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-206ENST00000510737 REG4Q9BYZ8 158 aa5.39□□□□□ -1.55
USP53-206ENST00000510737 TRIM45Q9H8W5 580 aaPredicted RBP5.39□□□□□ -1.55
USP53-206ENST00000510737 RBM22Q9NW64 420 aaKnown RBP eCLIP5.39□□□□□ -1.55
USP53-206ENST00000510737 PCSK1NQ9UHG2 260 aa5.39□□□□□ -1.55
USP53-206ENST00000510737 HEBP2Q9Y5Z4 205 aa5.39□□□□□ -1.55
USP53-206ENST00000510737 PCNX3Q9H6A9 2034 aa5.38□□□□□ -1.55
USP53-206ENST00000510737 ANXA7P20073 488 aaKnown RBP5.38□□□□□ -1.55
USP53-206ENST00000510737 EPHA2P29317 976 aa5.38□□□□□ -1.55
USP53-206ENST00000510737 PDHA2P29803 388 aa5.38□□□□□ -1.55
USP53-206ENST00000510737 CD86P42081 329 aa5.38□□□□□ -1.55
USP53-206ENST00000510737 ASCL1P50553 236 aa5.38□□□□□ -1.55
USP53-206ENST00000510737 BECN1Q14457 450 aa5.38□□□□□ -1.55
USP53-206ENST00000510737 EXOC3L4Q17RC7 722 aa5.38□□□□□ -1.55
USP53-206ENST00000510737 FAM174BQ3ZCQ3 159 aa5.38□□□□□ -1.55
USP53-206ENST00000510737 LDLRAP1Q5SW96 308 aa5.38□□□□□ -1.55
USP53-206ENST00000510737 PRMT9Q6P2P2 845 aa5.38□□□□□ -1.55
USP53-206ENST00000510737 GBP6Q6ZN66 633 aa5.38□□□□□ -1.55
USP53-206ENST00000510737 CPEB2Q7Z5Q1 589 aaKnown RBP5.38□□□□□ -1.55
USP53-206ENST00000510737 NAXEQ8NCW5 288 aa5.38□□□□□ -1.55
USP53-206ENST00000510737 SGMS2Q8NHU3 365 aa5.38□□□□□ -1.55
USP53-206ENST00000510737 HM13Q8TCT9 377 aa5.38□□□□□ -1.55
USP53-206ENST00000510737 SMPDL3BQ92485 455 aa5.38□□□□□ -1.55
USP53-206ENST00000510737 DHTKD1Q96HY7 919 aaPredicted RBP5.38□□□□□ -1.55
USP53-206ENST00000510737 LINC00615Q96LM1 132 aaPredicted RBP5.38□□□□□ -1.55
USP53-206ENST00000510737 TRIB3Q96RU7 358 aa5.38□□□□□ -1.55
USP53-206ENST00000510737 PCDHB18PQ96TA0 734 aa5.38□□□□□ -1.55
USP53-206ENST00000510737 CYTH2Q99418 400 aa5.38□□□□□ -1.55
USP53-206ENST00000510737 CCL19Q99731 98 aa5.38□□□□□ -1.55
USP53-206ENST00000510737 RHNO1Q9BSD3 238 aa5.38□□□□□ -1.55
USP53-206ENST00000510737 HGH1Q9BTY7 390 aa5.38□□□□□ -1.55
USP53-206ENST00000510737 SNRNP25Q9BV90 132 aaKnown RBP5.38□□□□□ -1.55
USP53-206ENST00000510737 BEX2Q9BXY8 128 aa5.38□□□□□ -1.55
USP53-206ENST00000510737 XPO4Q9C0E2 1151 aaKnown RBP5.38□□□□□ -1.55
USP53-206ENST00000510737 OR52A5Q9H2C5 316 aa5.38□□□□□ -1.55
USP53-206ENST00000510737 TRPC4Q9UBN4 977 aa5.38□□□□□ -1.55
USP53-206ENST00000510737 B4GALT7Q9UBV7 327 aa5.38□□□□□ -1.55
USP53-206ENST00000510737 CAMK2AQ9UQM7 478 aa5.38□□□□□ -1.55
USP53-206ENST00000510737 PHF3Q92576 2039 aaKnown RBP5.38□□□□□ -1.55
USP53-206ENST00000510737 MPDZO75970 2070 aa5.38□□□□□ -1.55
USP53-206ENST00000510737 ARID1AO14497 2285 aa5.37□□□□□ -1.55
USP53-206ENST00000510737 PINLYPA6NC86 204 aa5.37□□□□□ -1.55
USP53-206ENST00000510737 KLRC4-KLRK1H3BQV0 150 aa5.37□□□□□ -1.55
USP53-206ENST00000510737 GAPDHSO14556 408 aaPredicted RBP5.37□□□□□ -1.55
USP53-206ENST00000510737 BCKDKO14874 412 aa5.37□□□□□ -1.55
USP53-206ENST00000510737 GPRIN2O60269 458 aa5.37□□□□□ -1.55
USP53-206ENST00000510737 HLA-DQB2P05538 268 aa5.37□□□□□ -1.55
USP53-206ENST00000510737 FRMD6-AS1P0C7T7 363 aa5.37□□□□□ -1.55
USP53-206ENST00000510737 C8orf89P0DMQ9 161 aa5.37□□□□□ -1.55
USP53-206ENST00000510737 RBMXP38159 391 aaKnown RBP5.37□□□□□ -1.55
USP53-206ENST00000510737 SLC26A3P40879 764 aa5.37□□□□□ -1.55
USP53-206ENST00000510737 CD151P48509 253 aa5.37□□□□□ -1.55
USP53-206ENST00000510737 CYB561P49447 251 aa5.37□□□□□ -1.55
USP53-206ENST00000510737 GSCP56915 257 aaPredicted RBP5.37□□□□□ -1.55
USP53-206ENST00000510737 KRTAP10-8P60410 259 aa5.37□□□□□ -1.55
USP53-206ENST00000510737 DCTN2Q13561 401 aaKnown RBP5.37□□□□□ -1.55
USP53-206ENST00000510737 HYAL4Q2M3T9 481 aa5.37□□□□□ -1.55
USP53-206ENST00000510737 GRAMD1BQ3KR37 738 aa5.37□□□□□ -1.55
USP53-206ENST00000510737 GTDC1Q4AE62 458 aa5.37□□□□□ -1.55
USP53-206ENST00000510737 ZNF658BQ4V348 819 aaPredicted RBP5.37□□□□□ -1.55
USP53-206ENST00000510737 C1orf185Q5T7R7 199 aa5.37□□□□□ -1.55
USP53-206ENST00000510737 FRMPD2BQ6IN97 320 aa5.37□□□□□ -1.55
USP53-206ENST00000510737 C12orf54Q6X4T0 127 aa5.37□□□□□ -1.55
USP53-206ENST00000510737 LANCL3Q6ZV70 420 aa5.37□□□□□ -1.55
USP53-206ENST00000510737 ATPAF2Q8N5M1 289 aa5.37□□□□□ -1.55
USP53-206ENST00000510737 SLC5A8Q8N695 610 aa5.37□□□□□ -1.55
USP53-206ENST00000510737 ZNF614Q8N883 585 aa5.37□□□□□ -1.55
USP53-206ENST00000510737 TTC29Q8NA56 475 aaPredicted RBP5.37□□□□□ -1.55
USP53-206ENST00000510737 OR5AR1Q8NGP9 310 aa5.37□□□□□ -1.55
USP53-206ENST00000510737 M1APQ8TC57 530 aa5.37□□□□□ -1.55
USP53-206ENST00000510737 DTX3LQ8TDB6 740 aa5.37□□□□□ -1.55
USP53-206ENST00000510737 TFGQ92734 400 aaPredicted RBP5.37□□□□□ -1.55
USP53-206ENST00000510737 RNF125Q96EQ8 232 aa5.37□□□□□ -1.55
USP53-206ENST00000510737 C10orf90Q96M02 699 aa5.37□□□□□ -1.55
USP53-206ENST00000510737 TMEM68Q96MH6 324 aa5.37□□□□□ -1.55
USP53-206ENST00000510737 DACH2Q96NX9 599 aa5.37□□□□□ -1.55
USP53-206ENST00000510737 MCEEQ96PE7 176 aa5.37□□□□□ -1.55
USP53-206ENST00000510737 NR1H4Q96RI1 486 aaPredicted RBP5.37□□□□□ -1.55
USP53-206ENST00000510737 PKP2Q99959 881 aa5.37□□□□□ -1.55
USP53-206ENST00000510737 SELENOSQ9BQE4 189 aa5.37□□□□□ -1.55
USP53-206ENST00000510737 ZNF701Q9NV72 531 aaPredicted RBP5.37□□□□□ -1.55
USP53-206ENST00000510737 RMND1Q9NWS8 449 aa5.37□□□□□ -1.55
USP53-206ENST00000510737 TRMT1Q9NXH9 659 aaKnown RBP5.37□□□□□ -1.55
USP53-206ENST00000510737 ADAM22Q9P0K1 906 aa5.37□□□□□ -1.55
USP53-206ENST00000510737 C6orf203Q9P0P8 240 aaPredicted RBP5.37□□□□□ -1.55
USP53-206ENST00000510737 ARMCX1Q9P291 453 aa5.37□□□□□ -1.55
USP53-206ENST00000510737 TTLL3Q9Y4R7 772 aa5.37□□□□□ -1.55
USP53-206ENST00000510737 A0A1B0GVC2 190 aa5.36□□□□□ -1.55
USP53-206ENST00000510737 NDC80O14777 642 aa5.36□□□□□ -1.55
USP53-206ENST00000510737 PSMA7O14818 248 aa5.36□□□□□ -1.55
USP53-206ENST00000510737 SRPX2O60687 465 aaPredicted RBP5.36□□□□□ -1.55
USP53-206ENST00000510737 GNA14O95837 355 aa5.36□□□□□ -1.55
USP53-206ENST00000510737 CA4P22748 312 aa5.36□□□□□ -1.55
USP53-206ENST00000510737 CEACAM8P31997 349 aaPredicted RBP5.36□□□□□ -1.55
USP53-206ENST00000510737 SHMT2P34897 504 aa5.36□□□□□ -1.55
USP53-206ENST00000510737 CYLC1P35663 651 aaPredicted RBP5.36□□□□□ -1.55
USP53-206ENST00000510737 HMGCLP35914 325 aa5.36□□□□□ -1.55
USP53-206ENST00000510737 HLCSP50747 726 aa5.36□□□□□ -1.55
USP53-206ENST00000510737 PPIAP62937 165 aaKnown RBP5.36□□□□□ -1.55
USP53-206ENST00000510737 CDR2Q01850 454 aa5.36□□□□□ -1.55
USP53-206ENST00000510737 CLEC12BQ2HXU8 276 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms