RNA–Protein interactions for RNA: ENST00000508474.5

UBE2D3-224, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 4,819 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-224ENST00000508474 ZNF281Q9Y2X9 895 aa6.89□□□□□ -1.31
UBE2D3-224ENST00000508474 RIMBP3CA6NJZ7 1639 aa6.89□□□□□ -1.31
UBE2D3-224ENST00000508474 RIMBP3BA6NNM3 1639 aa6.89□□□□□ -1.31
UBE2D3-224ENST00000508474 RIMBP3Q9UFD9 1639 aa6.89□□□□□ -1.31
UBE2D3-224ENST00000508474 SLC9B1P1A6NJY1 282 aa6.88□□□□□ -1.31
UBE2D3-224ENST00000508474 K7EPK0 472 aa6.88□□□□□ -1.31
UBE2D3-224ENST00000508474 M0R3H8 397 aa6.88□□□□□ -1.31
UBE2D3-224ENST00000508474 SCO1O75880 301 aa6.88□□□□□ -1.31
UBE2D3-224ENST00000508474 PPP1R3DO95685 299 aa6.88□□□□□ -1.31
UBE2D3-224ENST00000508474 GASTP01350 101 aa6.88□□□□□ -1.31
UBE2D3-224ENST00000508474 FABP1P07148 127 aa6.88□□□□□ -1.31
UBE2D3-224ENST00000508474 HNF1BP35680 557 aa6.88□□□□□ -1.31
UBE2D3-224ENST00000508474 SGSHP51688 502 aa6.88□□□□□ -1.31
UBE2D3-224ENST00000508474 GPLD1P80108 840 aa6.88□□□□□ -1.31
UBE2D3-224ENST00000508474 GHRHRQ02643 423 aa6.88□□□□□ -1.31
UBE2D3-224ENST00000508474 TMEM115Q12893 351 aaPredicted RBP6.88□□□□□ -1.31
UBE2D3-224ENST00000508474 SMUG1Q53HV7 270 aa6.88□□□□□ -1.31
UBE2D3-224ENST00000508474 RAB6CQ53S08 254 aa6.88□□□□□ -1.31
UBE2D3-224ENST00000508474 BEX5Q5H9J7 111 aa6.88□□□□□ -1.31
UBE2D3-224ENST00000508474 OR4C11Q6IEV9 310 aa6.88□□□□□ -1.31
UBE2D3-224ENST00000508474 LEG1Q6P5S2 330 aa6.88□□□□□ -1.31
UBE2D3-224ENST00000508474 FIP1L1Q6UN15 594 aaKnown RBP6.88□□□□□ -1.31
UBE2D3-224ENST00000508474 ZNF705AQ6ZN79 300 aaPredicted RBP6.88□□□□□ -1.31
UBE2D3-224ENST00000508474 FCRLAQ7L513 359 aa6.88□□□□□ -1.31
UBE2D3-224ENST00000508474 KANSL1Q7Z3B3 1105 aa6.88□□□□□ -1.31
UBE2D3-224ENST00000508474 NAA40Q86UY6 237 aa6.88□□□□□ -1.31
UBE2D3-224ENST00000508474 SERPINA12Q8IW75 414 aa6.88□□□□□ -1.31
UBE2D3-224ENST00000508474 LAS2Q8IYD9 372 aa6.88□□□□□ -1.31
UBE2D3-224ENST00000508474 FAM71E2Q8N5Q1 922 aa6.88□□□□□ -1.31
UBE2D3-224ENST00000508474 RAB6CQ9H0N0 254 aa6.88□□□□□ -1.31
UBE2D3-224ENST00000508474 PELI2Q9HAT8 420 aa6.88□□□□□ -1.31
UBE2D3-224ENST00000508474 KCNK12Q9HB15 430 aa6.88□□□□□ -1.31
UBE2D3-224ENST00000508474 B3GAT2Q9NPZ5 323 aa6.88□□□□□ -1.31
UBE2D3-224ENST00000508474 PLSCR3Q9NRY6 295 aa6.88□□□□□ -1.31
UBE2D3-224ENST00000508474 GPATCH2Q9NW75 528 aa6.88□□□□□ -1.31
UBE2D3-224ENST00000508474 SNX11Q9Y5W9 270 aa6.88□□□□□ -1.31
UBE2D3-224ENST00000508474 PHRF1Q9P1Y6 1649 aaKnown RBP6.88□□□□□ -1.31
UBE2D3-224ENST00000508474 A0A0B4J2A0 478 aa6.88□□□□□ -1.31
UBE2D3-224ENST00000508474 A0A1B0GTW7 788 aa6.88□□□□□ -1.31
UBE2D3-224ENST00000508474 H7BY64 318 aa6.88□□□□□ -1.31
UBE2D3-224ENST00000508474 E2F3O00716 465 aa6.88□□□□□ -1.31
UBE2D3-224ENST00000508474 HCRTO43612 131 aa6.88□□□□□ -1.31
UBE2D3-224ENST00000508474 CSTAP01040 98 aa6.88□□□□□ -1.31
UBE2D3-224ENST00000508474 HEXBP07686 556 aa6.88□□□□□ -1.31
UBE2D3-224ENST00000508474 CSF3P09919 207 aa6.88□□□□□ -1.31
UBE2D3-224ENST00000508474 IFNGR1P15260 489 aa6.88□□□□□ -1.31
UBE2D3-224ENST00000508474 PREPP48147 710 aa6.88□□□□□ -1.31
UBE2D3-224ENST00000508474 MAP4K2Q12851 820 aa6.88□□□□□ -1.31
UBE2D3-224ENST00000508474 RPS26P11Q5JNZ5 115 aaPredicted RBP6.88□□□□□ -1.31
UBE2D3-224ENST00000508474 ARHGAP40Q5TG30 622 aa6.88□□□□□ -1.31
UBE2D3-224ENST00000508474 SUSD1Q6UWL2 747 aa6.88□□□□□ -1.31
UBE2D3-224ENST00000508474 IL20RBQ6UXL0 311 aa6.88□□□□□ -1.31
UBE2D3-224ENST00000508474 Q6ZPB1 254 aaPredicted RBP6.88□□□□□ -1.31
UBE2D3-224ENST00000508474 OR52I1Q8NGK6 324 aa6.88□□□□□ -1.31
UBE2D3-224ENST00000508474 C2CD4CQ8TF44 421 aa6.88□□□□□ -1.31
UBE2D3-224ENST00000508474 SRRQ9GZT4 340 aa6.88□□□□□ -1.31
UBE2D3-224ENST00000508474 NARFLQ9H6Q4 476 aa6.88□□□□□ -1.31
UBE2D3-224ENST00000508474 SHPKQ9UHJ6 478 aa6.88□□□□□ -1.31
UBE2D3-224ENST00000508474 BACE2Q9Y5Z0 518 aa6.88□□□□□ -1.31
UBE2D3-224ENST00000508474 PUS1Q9Y606 427 aaKnown RBP eCLIP6.88□□□□□ -1.31
UBE2D3-224ENST00000508474 MYH13Q9UKX3 1938 aa6.88□□□□□ -1.31
UBE2D3-224ENST00000508474 MROH6A6NGR9 719 aa6.88□□□□□ -1.31
UBE2D3-224ENST00000508474 A6NIN4 97 aa6.88□□□□□ -1.31
UBE2D3-224ENST00000508474 GRXCR1A8MXD5 290 aa6.88□□□□□ -1.31
UBE2D3-224ENST00000508474 ZNF195O14628 629 aa6.88□□□□□ -1.31
UBE2D3-224ENST00000508474 AKR7A2O43488 359 aa6.88□□□□□ -1.31
UBE2D3-224ENST00000508474 LAG3P18627 525 aa6.88□□□□□ -1.31
UBE2D3-224ENST00000508474 CDKN1CP49918 316 aaPredicted RBP6.88□□□□□ -1.31
UBE2D3-224ENST00000508474 CLCNKAP51800 687 aa6.88□□□□□ -1.31
UBE2D3-224ENST00000508474 PDX1P52945 283 aa6.88□□□□□ -1.31
UBE2D3-224ENST00000508474 GPR50Q13585 617 aa6.88□□□□□ -1.31
UBE2D3-224ENST00000508474 SNTB1Q13884 538 aaKnown RBP6.88□□□□□ -1.31
UBE2D3-224ENST00000508474 NXNL2Q5VZ03 156 aa6.88□□□□□ -1.31
UBE2D3-224ENST00000508474 FAM199XQ6PEV8 388 aaPredicted RBP6.88□□□□□ -1.31
UBE2D3-224ENST00000508474 CBARPQ8N350 705 aaPredicted RBP6.88□□□□□ -1.31
UBE2D3-224ENST00000508474 LILRB2Q8N423 598 aa6.88□□□□□ -1.31
UBE2D3-224ENST00000508474 SLC25A18Q9H1K4 315 aa6.88□□□□□ -1.31
UBE2D3-224ENST00000508474 ZNF768Q9H5H4 540 aaKnown RBP6.88□□□□□ -1.31
UBE2D3-224ENST00000508474 PARPBPQ9NWS1 579 aa6.88□□□□□ -1.31
UBE2D3-224ENST00000508474 B4GALT6Q9UBX8 382 aa6.88□□□□□ -1.31
UBE2D3-224ENST00000508474 USP22Q9UPT9 525 aa6.88□□□□□ -1.31
UBE2D3-224ENST00000508474 MYH11P35749 1972 aa6.88□□□□□ -1.31
UBE2D3-224ENST00000508474 TRAV20A0A0B4J274 112 aa6.88□□□□□ -1.31
UBE2D3-224ENST00000508474 TCRBV5S2A0A599 114 aa6.88□□□□□ -1.31
UBE2D3-224ENST00000508474 GABRR3A8MPY1 467 aa6.88□□□□□ -1.31
UBE2D3-224ENST00000508474 SNRPGP15A8MWD9 76 aa6.88□□□□□ -1.31
UBE2D3-224ENST00000508474 NFKBIEO00221 500 aa6.88□□□□□ -1.31
UBE2D3-224ENST00000508474 TAAR5O14804 337 aa6.88□□□□□ -1.31
UBE2D3-224ENST00000508474 CA12O43570 354 aa6.88□□□□□ -1.31
UBE2D3-224ENST00000508474 DPM1O60762 260 aa6.88□□□□□ -1.31
UBE2D3-224ENST00000508474 FKTNO75072 461 aa6.88□□□□□ -1.31
UBE2D3-224ENST00000508474 F10P00742 488 aa6.88□□□□□ -1.31
UBE2D3-224ENST00000508474 MBP02144 154 aa6.88□□□□□ -1.31
UBE2D3-224ENST00000508474 APODP05090 189 aa6.88□□□□□ -1.31
UBE2D3-224ENST00000508474 CLEC2LP0C7M8 214 aa6.88□□□□□ -1.31
UBE2D3-224ENST00000508474 HAPLN1P10915 354 aaPredicted RBP6.88□□□□□ -1.31
UBE2D3-224ENST00000508474 SNRPBP14678 240 aaKnown RBP6.88□□□□□ -1.31
UBE2D3-224ENST00000508474 GABRB1P18505 474 aa6.88□□□□□ -1.31
UBE2D3-224ENST00000508474 CPT2P23786 658 aa6.88□□□□□ -1.31
UBE2D3-224ENST00000508474 MASP1P48740 699 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms