RNA–Protein interactions for RNA: ENST00000506515.1

HERC4-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-213ENST00000506515 MBTPS2O43462 519 aa4.64□□□□□ -1.67
HERC4-213ENST00000506515 SCGB2A1O75556 95 aa4.64□□□□□ -1.67
HERC4-213ENST00000506515 TOM1L1O75674 476 aa4.64□□□□□ -1.67
HERC4-213ENST00000506515 HTR5AP47898 357 aa4.64□□□□□ -1.67
HERC4-213ENST00000506515 GPC3P51654 580 aa4.64□□□□□ -1.67
HERC4-213ENST00000506515 SLC8A3P57103 927 aa4.64□□□□□ -1.67
HERC4-213ENST00000506515 DPYSQ14117 519 aa4.64□□□□□ -1.67
HERC4-213ENST00000506515 EIF2B1Q14232 305 aaKnown RBP4.64□□□□□ -1.67
HERC4-213ENST00000506515 PNCKQ6P2M8 343 aa4.64□□□□□ -1.67
HERC4-213ENST00000506515 ERASQ7Z444 233 aa4.64□□□□□ -1.67
HERC4-213ENST00000506515 MISPQ8IVT2 679 aa4.64□□□□□ -1.67
HERC4-213ENST00000506515 SLC22A18ASQ8N1D0 253 aa4.64□□□□□ -1.67
HERC4-213ENST00000506515 CCDC110Q8TBZ0 833 aa4.64□□□□□ -1.67
HERC4-213ENST00000506515 TBCKQ8TEA7 893 aa4.64□□□□□ -1.67
HERC4-213ENST00000506515 TOP1MTQ969P6 601 aa4.64□□□□□ -1.67
HERC4-213ENST00000506515 RIOK1Q9BRS2 568 aaKnown RBP4.64□□□□□ -1.67
HERC4-213ENST00000506515 TRIM9Q9C026 710 aa4.64□□□□□ -1.67
HERC4-213ENST00000506515 KAT8Q9H7Z6 458 aaKnown RBP4.64□□□□□ -1.67
HERC4-213ENST00000506515 AMBNQ9NP70 447 aa4.64□□□□□ -1.67
HERC4-213ENST00000506515 DCAF13Q9NV06 445 aaKnown RBP4.64□□□□□ -1.67
HERC4-213ENST00000506515 MBD2Q9UBB5 411 aa4.64□□□□□ -1.67
HERC4-213ENST00000506515 GHRLQ9UBU3 117 aa4.64□□□□□ -1.67
HERC4-213ENST00000506515 AURKCQ9UQB9 309 aa4.64□□□□□ -1.67
HERC4-213ENST00000506515 GRIN2DO15399 1336 aa4.64□□□□□ -1.67
HERC4-213ENST00000506515 FOCADQ5VW36 1801 aa4.63□□□□□ -1.67
HERC4-213ENST00000506515 TRAV9-2A0A087WT02 112 aa4.63□□□□□ -1.67
HERC4-213ENST00000506515 TTC26A0AVF1 554 aa4.63□□□□□ -1.67
HERC4-213ENST00000506515 RSPH10B2B2RC85 870 aa4.63□□□□□ -1.67
HERC4-213ENST00000506515 NPIPA2E9PIF3 369 aa4.63□□□□□ -1.67
HERC4-213ENST00000506515 E9PMD0 336 aa4.63□□□□□ -1.67
HERC4-213ENST00000506515 C11orf98E9PRG8 122 aa4.63□□□□□ -1.67
HERC4-213ENST00000506515 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP4.63□□□□□ -1.67
HERC4-213ENST00000506515 SGK494L7N484 410 aa4.63□□□□□ -1.67
HERC4-213ENST00000506515 PDLIM1O00151 329 aa4.63□□□□□ -1.67
HERC4-213ENST00000506515 E2F3O00716 465 aa4.63□□□□□ -1.67
HERC4-213ENST00000506515 NDUFA7O95182 113 aa4.63□□□□□ -1.67
HERC4-213ENST00000506515 APBB3O95704 486 aa4.63□□□□□ -1.67
HERC4-213ENST00000506515 ANXA4P09525 319 aaPredicted RBP4.63□□□□□ -1.67
HERC4-213ENST00000506515 WNT2P09544 360 aa4.63□□□□□ -1.67
HERC4-213ENST00000506515 RSPH10BP0C881 870 aa4.63□□□□□ -1.67
HERC4-213ENST00000506515 GSTT2P0CG29 244 aa4.63□□□□□ -1.67
HERC4-213ENST00000506515 GSTT2BP0CG30 244 aa4.63□□□□□ -1.67
HERC4-213ENST00000506515 HOXB8P17481 243 aaPredicted RBP4.63□□□□□ -1.67
HERC4-213ENST00000506515 PAICSP22234 425 aaKnown RBP4.63□□□□□ -1.67
HERC4-213ENST00000506515 GATA2P23769 480 aaPredicted RBP4.63□□□□□ -1.67
HERC4-213ENST00000506515 ELK3P41970 407 aa4.63□□□□□ -1.67
HERC4-213ENST00000506515 POU3F4P49335 361 aa4.63□□□□□ -1.67
HERC4-213ENST00000506515 MRPS6P82932 125 aaKnown RBP4.63□□□□□ -1.67
HERC4-213ENST00000506515 HSF2Q03933 536 aa4.63□□□□□ -1.67
HERC4-213ENST00000506515 ZNF33BQ06732 778 aa4.63□□□□□ -1.67
HERC4-213ENST00000506515 KRTAP27-1Q3LI81 207 aa4.63□□□□□ -1.67
HERC4-213ENST00000506515 ADPRMQ3LIE5 342 aa4.63□□□□□ -1.67
HERC4-213ENST00000506515 SBK1Q52WX2 424 aa4.63□□□□□ -1.67
HERC4-213ENST00000506515 MS4A13Q5J8X5 152 aa4.63□□□□□ -1.67
HERC4-213ENST00000506515 TCTEX1D4Q5JR98 221 aa4.63□□□□□ -1.67
HERC4-213ENST00000506515 DMKNQ6E0U4 476 aaPredicted RBP4.63□□□□□ -1.67
HERC4-213ENST00000506515 ZNF562Q6V9R5 426 aa4.63□□□□□ -1.67
HERC4-213ENST00000506515 CATSPER4Q7RTX7 472 aa4.63□□□□□ -1.67
HERC4-213ENST00000506515 VPS36Q86VN1 386 aa4.63□□□□□ -1.67
HERC4-213ENST00000506515 FGFRL1Q8N441 504 aa4.63□□□□□ -1.67
HERC4-213ENST00000506515 SLC25A36Q96CQ1 311 aa4.63□□□□□ -1.67
HERC4-213ENST00000506515 MCCC1Q96RQ3 725 aaPredicted RBP4.63□□□□□ -1.67
HERC4-213ENST00000506515 CARD6Q9BX69 1037 aa4.63□□□□□ -1.67
HERC4-213ENST00000506515 MFSD1Q9H3U5 465 aa4.63□□□□□ -1.67
HERC4-213ENST00000506515 DUS2Q9NX74 493 aaKnown RBP4.63□□□□□ -1.67
HERC4-213ENST00000506515 ANKMY1Q9P2S6 941 aa4.63□□□□□ -1.67
HERC4-213ENST00000506515 DHRS7Q9Y394 339 aa4.63□□□□□ -1.67
HERC4-213ENST00000506515 CACNA1GO43497 2377 aa4.63□□□□□ -1.67
HERC4-213ENST00000506515 IGHV3OR16-12A0A075B7B8 117 aa4.62□□□□□ -1.67
HERC4-213ENST00000506515 EPOPA6NHQ4 379 aa4.62□□□□□ -1.67
HERC4-213ENST00000506515 LOC730098B7Z3J9 87 aa4.62□□□□□ -1.67
HERC4-213ENST00000506515 H3BTX0 84 aa4.62□□□□□ -1.67
HERC4-213ENST00000506515 TYROBPO43914 113 aa4.62□□□□□ -1.67
HERC4-213ENST00000506515 HMMRO75330 724 aa4.62□□□□□ -1.67
HERC4-213ENST00000506515 VPS26AO75436 327 aa4.62□□□□□ -1.67
HERC4-213ENST00000506515 TOXO94900 526 aa4.62□□□□□ -1.67
HERC4-213ENST00000506515 NDUFB10O96000 172 aa4.62□□□□□ -1.67
HERC4-213ENST00000506515 IGHV3-9P01782 118 aa4.62□□□□□ -1.67
HERC4-213ENST00000506515 SNRPCP09234 159 aaKnown RBP4.62□□□□□ -1.67
HERC4-213ENST00000506515 FAM200BP0CF97 657 aa4.62□□□□□ -1.67
HERC4-213ENST00000506515 PPIAP62937 165 aaKnown RBP4.62□□□□□ -1.67
HERC4-213ENST00000506515 ZP4Q12836 540 aa4.62□□□□□ -1.67
HERC4-213ENST00000506515 TTC31Q49AM3 519 aaPredicted RBP4.62□□□□□ -1.67
HERC4-213ENST00000506515 HIGD2BQ4VC39 106 aa4.62□□□□□ -1.67
HERC4-213ENST00000506515 TCEAL5Q5H9L2 206 aa4.62□□□□□ -1.67
HERC4-213ENST00000506515 LPCAT2Q7L5N7 544 aa4.62□□□□□ -1.67
HERC4-213ENST00000506515 CEACAM19Q7Z692 300 aa4.62□□□□□ -1.67
HERC4-213ENST00000506515 MYOCDQ8IZQ8 938 aa4.62□□□□□ -1.67
HERC4-213ENST00000506515 RFESDQ8TAC1 157 aa4.62□□□□□ -1.67
HERC4-213ENST00000506515 GIPC3Q8TF64 312 aa4.62□□□□□ -1.67
HERC4-213ENST00000506515 DNAJA3Q96EY1 480 aa4.62□□□□□ -1.67
HERC4-213ENST00000506515 RPP25Q9BUL9 199 aaKnown RBP4.62□□□□□ -1.67
HERC4-213ENST00000506515 CCSER1Q9C0I3 900 aa4.62□□□□□ -1.67
HERC4-213ENST00000506515 ZBP1Q9H171 429 aa4.62□□□□□ -1.67
HERC4-213ENST00000506515 DPH5Q9H2P9 285 aa4.62□□□□□ -1.67
HERC4-213ENST00000506515 ECT2Q9H8V3 914 aa4.62□□□□□ -1.67
HERC4-213ENST00000506515 TRPV5Q9NQA5 729 aa4.62□□□□□ -1.67
HERC4-213ENST00000506515 KLRF1Q9NZS2 232 aa4.62□□□□□ -1.67
HERC4-213ENST00000506515 ATXN10Q9UBB4 475 aa4.62□□□□□ -1.67
HERC4-213ENST00000506515 PRODH2Q9UF12 536 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms