RNA–Protein interactions for RNA: ENST00000503346.1

PDLIM7-209, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-209ENST00000503346 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.46■□□□□ 0.23
PDLIM7-209ENST00000503346 CORO2BQ9UQ03 480 aa16.46■□□□□ 0.23
PDLIM7-209ENST00000503346 DIDO1Q9BTC0 2240 aaKnown RBP16.46■□□□□ 0.23
PDLIM7-209ENST00000503346 TMEM247A6NEH6 219 aa16.45■□□□□ 0.22
PDLIM7-209ENST00000503346 KDM4EB2RXH2 506 aaPredicted RBP16.45■□□□□ 0.22
PDLIM7-209ENST00000503346 H3BML4 177 aa16.45■□□□□ 0.22
PDLIM7-209ENST00000503346 ETV2O00321 342 aaPredicted RBP16.45■□□□□ 0.22
PDLIM7-209ENST00000503346 SLC22A2O15244 555 aa16.45■□□□□ 0.22
PDLIM7-209ENST00000503346 TOXO94900 526 aa16.45■□□□□ 0.22
PDLIM7-209ENST00000503346 CLDN14O95500 239 aa16.45■□□□□ 0.22
PDLIM7-209ENST00000503346 BCHEP06276 602 aa16.45■□□□□ 0.22
PDLIM7-209ENST00000503346 DBIP07108 87 aaKnown RBP16.45■□□□□ 0.22
PDLIM7-209ENST00000503346 UBTFL6P0CB48 400 aaPredicted RBP16.45■□□□□ 0.22
PDLIM7-209ENST00000503346 GPX2P18283 190 aa16.45■□□□□ 0.22
PDLIM7-209ENST00000503346 ADH6P28332 368 aa16.45■□□□□ 0.22
PDLIM7-209ENST00000503346 SEC24CP53992 1094 aa16.45■□□□□ 0.22
PDLIM7-209ENST00000503346 CLDN15P56746 228 aa16.45■□□□□ 0.22
PDLIM7-209ENST00000503346 PLAURQ03405 335 aa16.45■□□□□ 0.22
PDLIM7-209ENST00000503346 CDSNQ15517 529 aa16.45■□□□□ 0.22
PDLIM7-209ENST00000503346 COQ5Q5HYK3 327 aa16.45■□□□□ 0.22
PDLIM7-209ENST00000503346 HMGN2P46Q86SG4 172 aa16.45■□□□□ 0.22
PDLIM7-209ENST00000503346 MEIOBQ8N635 442 aa16.45■□□□□ 0.22
PDLIM7-209ENST00000503346 RNF145Q96MT1 663 aa16.45■□□□□ 0.22
PDLIM7-209ENST00000503346 TRIB1Q96RU8 372 aa16.45■□□□□ 0.22
PDLIM7-209ENST00000503346 CGREF1Q99674 301 aa16.45■□□□□ 0.22
PDLIM7-209ENST00000503346 TREX2Q9BQ50 279 aaPredicted RBP16.45■□□□□ 0.22
PDLIM7-209ENST00000503346 IKZF5Q9H5V7 419 aa16.45■□□□□ 0.22
PDLIM7-209ENST00000503346 EXOSC3Q9NQT5 275 aaKnown RBP16.45■□□□□ 0.22
PDLIM7-209ENST00000503346 GPC6Q9Y625 555 aaPredicted RBP16.45■□□□□ 0.22
PDLIM7-209ENST00000503346 PTPN13Q12923 2485 aa16.44■□□□□ 0.22
PDLIM7-209ENST00000503346 NCOA6Q14686 2063 aaPredicted RBP16.44■□□□□ 0.22
PDLIM7-209ENST00000503346 A0A0G2JNJ9 132 aa16.44■□□□□ 0.22
PDLIM7-209ENST00000503346 A0A0G2JPF8 293 aa16.44■□□□□ 0.22
PDLIM7-209ENST00000503346 MBD3L4A6NDZ8 208 aaPredicted RBP16.44■□□□□ 0.22
PDLIM7-209ENST00000503346 MBD3L3A6NE82 208 aaPredicted RBP16.44■□□□□ 0.22
PDLIM7-209ENST00000503346 MBD3L5A6NJ08 208 aaPredicted RBP16.44■□□□□ 0.22
PDLIM7-209ENST00000503346 CLDN24A6NM45 220 aa16.44■□□□□ 0.22
PDLIM7-209ENST00000503346 CLCA1A8K7I4 914 aa16.44■□□□□ 0.22
PDLIM7-209ENST00000503346 EVPLLA8MZ36 301 aa16.44■□□□□ 0.22
PDLIM7-209ENST00000503346 HNRNPCL2B2RXH8 293 aa16.44■□□□□ 0.22
PDLIM7-209ENST00000503346 HNRNPCL3B7ZW38 293 aa16.44■□□□□ 0.22
PDLIM7-209ENST00000503346 FBP2O00757 339 aa16.44■□□□□ 0.22
PDLIM7-209ENST00000503346 HNRNPCL1O60812 293 aaKnown RBP16.44■□□□□ 0.22
PDLIM7-209ENST00000503346 BCAS1O75363 584 aaPredicted RBP16.44■□□□□ 0.22
PDLIM7-209ENST00000503346 CYP7B1O75881 506 aa16.44■□□□□ 0.22
PDLIM7-209ENST00000503346 NTN1O95631 604 aa16.44■□□□□ 0.22
PDLIM7-209ENST00000503346 NUDT14O95848 222 aa16.44■□□□□ 0.22
PDLIM7-209ENST00000503346 HNRNPCL4P0DMR1 293 aa16.44■□□□□ 0.22
PDLIM7-209ENST00000503346 PRKCAP17252 672 aa16.44■□□□□ 0.22
PDLIM7-209ENST00000503346 CEACAM8P31997 349 aaPredicted RBP16.44■□□□□ 0.22
PDLIM7-209ENST00000503346 GYS2P54840 703 aa16.44■□□□□ 0.22
PDLIM7-209ENST00000503346 EEFSECP57772 596 aaKnown RBP16.44■□□□□ 0.22
PDLIM7-209ENST00000503346 FOXF1Q12946 379 aa16.44■□□□□ 0.22
PDLIM7-209ENST00000503346 NFYCQ13952 458 aa16.44■□□□□ 0.22
PDLIM7-209ENST00000503346 MAPRE2Q15555 327 aa16.44■□□□□ 0.22
PDLIM7-209ENST00000503346 TOMM34Q15785 309 aaPredicted RBP16.44■□□□□ 0.22
PDLIM7-209ENST00000503346 SLC25A53Q5H9E4 307 aa16.44■□□□□ 0.22
PDLIM7-209ENST00000503346 GCNT6Q5T4J0 391 aa16.44■□□□□ 0.22
PDLIM7-209ENST00000503346 SPATA21Q7Z572 469 aa16.44■□□□□ 0.22
PDLIM7-209ENST00000503346 CCDC71Q8IV32 467 aaPredicted RBP16.44■□□□□ 0.22
PDLIM7-209ENST00000503346 PEX5LQ8IYB4 626 aa16.44■□□□□ 0.22
PDLIM7-209ENST00000503346 C10orf111Q8N326 155 aa16.44■□□□□ 0.22
PDLIM7-209ENST00000503346 TMCO5AQ8N6Q1 288 aa16.44■□□□□ 0.22
PDLIM7-209ENST00000503346 METTL25Q8N6Q8 603 aa16.44■□□□□ 0.22
PDLIM7-209ENST00000503346 OR10Q1Q8NGQ4 319 aa16.44■□□□□ 0.22
PDLIM7-209ENST00000503346 LILRB4Q8NHJ6 448 aa16.44■□□□□ 0.22
PDLIM7-209ENST00000503346 MBD3L2Q8NHZ7 208 aaPredicted RBP16.44■□□□□ 0.22
PDLIM7-209ENST00000503346 WDR60Q8WVS4 1066 aa16.44■□□□□ 0.22
PDLIM7-209ENST00000503346 MAL2Q969L2 176 aa16.44■□□□□ 0.22
PDLIM7-209ENST00000503346 ANKRD27Q96NW4 1050 aa16.44■□□□□ 0.22
PDLIM7-209ENST00000503346 BCL2L10Q9HD36 194 aa16.44■□□□□ 0.22
PDLIM7-209ENST00000503346 CLCF1Q9UBD9 225 aa16.44■□□□□ 0.22
PDLIM7-209ENST00000503346 STOML1Q9UBI4 398 aa16.44■□□□□ 0.22
PDLIM7-209ENST00000503346 Q9UFV3 132 aa16.44■□□□□ 0.22
PDLIM7-209ENST00000503346 CAPN7Q9Y6W3 813 aa16.44■□□□□ 0.22
PDLIM7-209ENST00000503346 FREM3P0C091 2139 aa16.43■□□□□ 0.22
PDLIM7-209ENST00000503346 SPTAN1Q13813 2472 aaKnown RBP16.43■□□□□ 0.22
PDLIM7-209ENST00000503346 TNFSF12-TNFSF13A0A0A6YY99 330 aa16.43■□□□□ 0.22
PDLIM7-209ENST00000503346 GMNCA6NCL1 334 aa16.43■□□□□ 0.22
PDLIM7-209ENST00000503346 HSPB2A8KAH6 182 aa16.43■□□□□ 0.22
PDLIM7-209ENST00000503346 BBIP1A8MTZ0 92 aa16.43■□□□□ 0.22
PDLIM7-209ENST00000503346 CCDC22O60826 627 aa16.43■□□□□ 0.22
PDLIM7-209ENST00000503346 ARAFP10398 606 aa16.43■□□□□ 0.22
PDLIM7-209ENST00000503346 NID1P14543 1247 aa16.43■□□□□ 0.22
PDLIM7-209ENST00000503346 IL7RP16871 459 aa16.43■□□□□ 0.22
PDLIM7-209ENST00000503346 PGCP20142 388 aa16.43■□□□□ 0.22
PDLIM7-209ENST00000503346 DRD4P21917 467 aa16.43■□□□□ 0.22
PDLIM7-209ENST00000503346 ELK4P28324 431 aa16.43■□□□□ 0.22
PDLIM7-209ENST00000503346 CCR4P51679 360 aa16.43■□□□□ 0.22
PDLIM7-209ENST00000503346 SUCLG1P53597 346 aaKnown RBP16.43■□□□□ 0.22
PDLIM7-209ENST00000503346 CLDN20P56880 219 aa16.43■□□□□ 0.22
PDLIM7-209ENST00000503346 RAC1P63000 192 aa16.43■□□□□ 0.22
PDLIM7-209ENST00000503346 QPRTQ15274 297 aa16.43■□□□□ 0.22
PDLIM7-209ENST00000503346 HSPB2Q16082 182 aa16.43■□□□□ 0.22
PDLIM7-209ENST00000503346 GGNQ86UU5 652 aa16.43■□□□□ 0.22
PDLIM7-209ENST00000503346 UBQLNLQ8IYU4 475 aa16.43■□□□□ 0.22
PDLIM7-209ENST00000503346 TNIP2Q8NFZ5 429 aa16.43■□□□□ 0.22
PDLIM7-209ENST00000503346 FBXO27Q8NI29 283 aa16.43■□□□□ 0.22
PDLIM7-209ENST00000503346 BBS10Q8TAM1 723 aa16.43■□□□□ 0.22
PDLIM7-209ENST00000503346 CA5BP1Q8WTZ4 195 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms