RNA–Protein interactions for RNA: ENST00000502394.1

MATR3-231, Transcript of matrin 3, human

TSL 4

Gene MATR3, Length 589 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-231	ENST00000502394	SVOPL	Q8N434	492 aa		11.1	□□□□□ -0.63
MATR3-231	ENST00000502394	LSMEM1	Q8N8F7	131 aa		11.1	□□□□□ -0.63
MATR3-231	ENST00000502394	GATS	Q8NAP1	163 aa		11.1	□□□□□ -0.63
MATR3-231	ENST00000502394	CLEC1A	Q8NC01	280 aa		11.1	□□□□□ -0.63
MATR3-231	ENST00000502394	ICA1L	Q8NDH6	482 aa		11.1	□□□□□ -0.63
MATR3-231	ENST00000502394	TOR1AIP2	Q8NFQ8	470 aa		11.1	□□□□□ -0.63
MATR3-231	ENST00000502394	PHOSPHO1	Q8TCT1	267 aa		11.1	□□□□□ -0.63
MATR3-231	ENST00000502394	ARSG	Q96EG1	525 aa		11.1	□□□□□ -0.63
MATR3-231	ENST00000502394	BARD1	Q99728	777 aa	Known RBP	11.1	□□□□□ -0.63
MATR3-231	ENST00000502394	SLC29A1	Q99808	456 aa		11.1	□□□□□ -0.63
MATR3-231	ENST00000502394	PSD2	Q9BQI7	771 aa		11.1	□□□□□ -0.63
MATR3-231	ENST00000502394	TBL1XR1	Q9BZK7	514 aa		11.1	□□□□□ -0.63
MATR3-231	ENST00000502394	GABARAPL1	Q9H0R8	117 aa		11.1	□□□□□ -0.63
MATR3-231	ENST00000502394	NMNAT1	Q9HAN9	279 aa	Predicted RBP	11.1	□□□□□ -0.63
MATR3-231	ENST00000502394	PROK2	Q9HC23	129 aa		11.1	□□□□□ -0.63
MATR3-231	ENST00000502394	CPNE5	Q9HCH3	593 aa		11.1	□□□□□ -0.63
MATR3-231	ENST00000502394	PRDM4	Q9UKN5	801 aa		11.1	□□□□□ -0.63
MATR3-231	ENST00000502394	ICAM5	Q9UMF0	924 aa		11.1	□□□□□ -0.63
MATR3-231	ENST00000502394	FAM32A	Q9Y421	112 aa	Known RBP	11.1	□□□□□ -0.63
MATR3-231	ENST00000502394	TESMIN	Q9Y4I5	508 aa		11.1	□□□□□ -0.63
MATR3-231	ENST00000502394	CPAMD8	Q8IZJ3	1885 aa		11.1	□□□□□ -0.63
MATR3-231	ENST00000502394	FREM2	Q5SZK8	3169 aa		11.1	□□□□□ -0.63
MATR3-231	ENST00000502394		A0A0B4J2E0	115 aa		11.09	□□□□□ -0.63
MATR3-231	ENST00000502394		A0A1B0GX12	115 aa		11.09	□□□□□ -0.63
MATR3-231	ENST00000502394	ANKRD33B	A6NCL7	494 aa		11.09	□□□□□ -0.63
MATR3-231	ENST00000502394		H3BNH8	94 aa		11.09	□□□□□ -0.63
MATR3-231	ENST00000502394	AP3D1	O14617	1153 aa		11.09	□□□□□ -0.63
MATR3-231	ENST00000502394	TP53I11	O14683	189 aa		11.09	□□□□□ -0.63
MATR3-231	ENST00000502394	KLK10	O43240	276 aa		11.09	□□□□□ -0.63
MATR3-231	ENST00000502394	NDUFB5	O43674	189 aa		11.09	□□□□□ -0.63
MATR3-231	ENST00000502394	SCO2	O43819	266 aa		11.09	□□□□□ -0.63
MATR3-231	ENST00000502394	H1F0	P07305	194 aa	Known RBP	11.09	□□□□□ -0.63
MATR3-231	ENST00000502394	THRB	P10828	461 aa		11.09	□□□□□ -0.63
MATR3-231	ENST00000502394	ITGA3	P26006	1051 aa		11.09	□□□□□ -0.63
MATR3-231	ENST00000502394	ELAVL4	P26378	380 aa	Known RBP	11.09	□□□□□ -0.63
MATR3-231	ENST00000502394	VHL	P40337	213 aa		11.09	□□□□□ -0.63
MATR3-231	ENST00000502394	HLCS	P50747	726 aa		11.09	□□□□□ -0.63
MATR3-231	ENST00000502394	DLX5	P56178	289 aa		11.09	□□□□□ -0.63
MATR3-231	ENST00000502394	SNTA1	Q13424	505 aa		11.09	□□□□□ -0.63
MATR3-231	ENST00000502394	GANAB	Q14697	944 aa	Known RBP	11.09	□□□□□ -0.63
MATR3-231	ENST00000502394	OR1Q1	Q15612	314 aa		11.09	□□□□□ -0.63
MATR3-231	ENST00000502394	COLEC12	Q5KU26	742 aa		11.09	□□□□□ -0.63
MATR3-231	ENST00000502394	BICRAL	Q6AI39	1079 aa		11.09	□□□□□ -0.63
MATR3-231	ENST00000502394	PPP4R4	Q6NUP7	873 aa		11.09	□□□□□ -0.63
MATR3-231	ENST00000502394	IL20RB	Q6UXL0	311 aa		11.09	□□□□□ -0.63
MATR3-231	ENST00000502394	RANBP3L	Q86VV4	465 aa	Predicted RBP	11.09	□□□□□ -0.63
MATR3-231	ENST00000502394	CYP4Z1	Q86W10	505 aa		11.09	□□□□□ -0.63
MATR3-231	ENST00000502394	APLF	Q8IW19	511 aa	Predicted RBP	11.09	□□□□□ -0.63
MATR3-231	ENST00000502394	HS3ST5	Q8IZT8	346 aa		11.09	□□□□□ -0.63
MATR3-231	ENST00000502394	OR5M3	Q8NGP4	307 aa		11.09	□□□□□ -0.63
MATR3-231	ENST00000502394	ADAMTS16	Q8TE57	1224 aa		11.09	□□□□□ -0.63
MATR3-231	ENST00000502394	ZNF524	Q96C55	264 aa		11.09	□□□□□ -0.63
MATR3-231	ENST00000502394	SGCZ	Q96LD1	299 aa		11.09	□□□□□ -0.63
MATR3-231	ENST00000502394	CIB1	Q99828	191 aa		11.09	□□□□□ -0.63
MATR3-231	ENST00000502394	PRSS27	Q9BQR3	290 aa		11.09	□□□□□ -0.63
MATR3-231	ENST00000502394	ZNF559	Q9BR84	538 aa		11.09	□□□□□ -0.63
MATR3-231	ENST00000502394	C9orf16	Q9BUW7	83 aa		11.09	□□□□□ -0.63
MATR3-231	ENST00000502394	OSBPL11	Q9BXB4	747 aa		11.09	□□□□□ -0.63
MATR3-231	ENST00000502394	ANGPTL4	Q9BY76	406 aa		11.09	□□□□□ -0.63
MATR3-231	ENST00000502394	ING2	Q9H160	280 aa		11.09	□□□□□ -0.63
MATR3-231	ENST00000502394	ANKRD19P	Q9H560	264 aa		11.09	□□□□□ -0.63
MATR3-231	ENST00000502394	ZNF552	Q9H707	407 aa	Predicted RBP	11.09	□□□□□ -0.63
MATR3-231	ENST00000502394	COQ10B	Q9H8M1	238 aa		11.09	□□□□□ -0.63
MATR3-231	ENST00000502394	REEP1	Q9H902	201 aa		11.09	□□□□□ -0.63
MATR3-231	ENST00000502394	HPF1	Q9NWY4	346 aa		11.09	□□□□□ -0.63
MATR3-231	ENST00000502394	CARD8	Q9Y2G2	431 aa		11.09	□□□□□ -0.63
MATR3-231	ENST00000502394	SAMHD1	Q9Y3Z3	626 aa	Known RBP	11.09	□□□□□ -0.63
MATR3-231	ENST00000502394	MAGED1	Q9Y5V3	778 aa	Predicted RBP	11.09	□□□□□ -0.63
MATR3-231	ENST00000502394	HEATR5A	Q86XA9	2040 aa		11.08	□□□□□ -0.64
MATR3-231	ENST00000502394	TRBV4-1	A0A0J9YWV2	114 aa		11.08	□□□□□ -0.64
MATR3-231	ENST00000502394		A0A1B0GWA3	101 aa		11.08	□□□□□ -0.64
MATR3-231	ENST00000502394	TRAPPC13	A5PLN9	417 aa		11.08	□□□□□ -0.64
MATR3-231	ENST00000502394	ARRDC5	A6NEK1	342 aa		11.08	□□□□□ -0.64
MATR3-231	ENST00000502394	CPSF4L	A6NMK7	179 aa	Known RBP	11.08	□□□□□ -0.64
MATR3-231	ENST00000502394	PDLIM1	O00151	329 aa		11.08	□□□□□ -0.64
MATR3-231	ENST00000502394	TNFRSF11B	O00300	401 aa		11.08	□□□□□ -0.64
MATR3-231	ENST00000502394	ETV2	O00321	342 aa	Predicted RBP	11.08	□□□□□ -0.64
MATR3-231	ENST00000502394	DLGAP1	O14490	977 aa		11.08	□□□□□ -0.64
MATR3-231	ENST00000502394	SOCS2	O14508	198 aa		11.08	□□□□□ -0.64
MATR3-231	ENST00000502394	GNGT2	O14610	69 aa		11.08	□□□□□ -0.64
MATR3-231	ENST00000502394	CEACAM4	O75871	244 aa		11.08	□□□□□ -0.64
MATR3-231	ENST00000502394	GADD45G	O95257	159 aa		11.08	□□□□□ -0.64
MATR3-231	ENST00000502394	RASAL1	O95294	804 aa		11.08	□□□□□ -0.64
MATR3-231	ENST00000502394	CCL3	P10147	92 aa		11.08	□□□□□ -0.64
MATR3-231	ENST00000502394	ZNF23	P17027	643 aa		11.08	□□□□□ -0.64
MATR3-231	ENST00000502394	MST1	P26927	711 aa		11.08	□□□□□ -0.64
MATR3-231	ENST00000502394	EIF2S3	P41091	472 aa	Known RBP	11.08	□□□□□ -0.64
MATR3-231	ENST00000502394	ST13	P50502	369 aa	Known RBP	11.08	□□□□□ -0.64
MATR3-231	ENST00000502394	P2RX1	P51575	399 aa		11.08	□□□□□ -0.64
MATR3-231	ENST00000502394	CDH12	P55289	794 aa		11.08	□□□□□ -0.64
MATR3-231	ENST00000502394	SUMO3	P55854	103 aa	Predicted RBP	11.08	□□□□□ -0.64
MATR3-231	ENST00000502394	SMIM11A	P58511	58 aa		11.08	□□□□□ -0.64
MATR3-231	ENST00000502394	RPP38	P78345	283 aa	Known RBP	11.08	□□□□□ -0.64
MATR3-231	ENST00000502394	PPP2R2B	Q00005	443 aa		11.08	□□□□□ -0.64
MATR3-231	ENST00000502394	EXOC3L2	Q2M3D2	409 aa		11.08	□□□□□ -0.64
MATR3-231	ENST00000502394	ZNF770	Q6IQ21	691 aa	Predicted RBP	11.08	□□□□□ -0.64
MATR3-231	ENST00000502394	ZNF613	Q6PF04	617 aa		11.08	□□□□□ -0.64
MATR3-231	ENST00000502394	RTL4	Q6ZR62	310 aa		11.08	□□□□□ -0.64
MATR3-231	ENST00000502394	PLEKHM3	Q6ZWE6	761 aa		11.08	□□□□□ -0.64
MATR3-231	ENST00000502394	GDF7	Q7Z4P5	450 aa		11.08	□□□□□ -0.64

Retrieved 100 of 20,778 RNA–protein pairs in 43 ms