RNA–Protein interactions for RNA: ENST00000498339.1

CDK9-205, Transcript of cyclin dependent kinase 9, humanhuman

TSL 2

Gene CDK9, Length 458 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-205ENST00000498339 ZMYND19Q96E35 227 aaPredicted RBP10.28□□□□□ -0.76
CDK9-205ENST00000498339 ELP4Q96EB1 424 aa10.28□□□□□ -0.76
CDK9-205ENST00000498339 ZNF300Q96RE9 604 aaPredicted RBP10.28□□□□□ -0.76
CDK9-205ENST00000498339 KLHDC3Q9BQ90 382 aa10.28□□□□□ -0.76
CDK9-205ENST00000498339 PSD2Q9BQI7 771 aa10.28□□□□□ -0.76
CDK9-205ENST00000498339 ERP44Q9BS26 406 aa10.28□□□□□ -0.76
CDK9-205ENST00000498339 INPP5KQ9BT40 448 aa10.28□□□□□ -0.76
CDK9-205ENST00000498339 PRR14Q9BWN1 585 aa10.28□□□□□ -0.76
CDK9-205ENST00000498339 CXorf36Q9H7Y0 433 aa10.28□□□□□ -0.76
CDK9-205ENST00000498339 TRAF6Q9Y4K3 522 aa10.28□□□□□ -0.76
CDK9-205ENST00000498339 IGHV4-61A0A0C4DH41 118 aa10.27□□□□□ -0.77
CDK9-205ENST00000498339 A0A1W2PNR3 127 aa10.27□□□□□ -0.77
CDK9-205ENST00000498339 HMX2A2RU54 273 aa10.27□□□□□ -0.77
CDK9-205ENST00000498339 TTC36A6NLP5 189 aa10.27□□□□□ -0.77
CDK9-205ENST00000498339 KIF2AO00139 706 aaPredicted RBP10.27□□□□□ -0.77
CDK9-205ENST00000498339 NDUFS8O00217 210 aa10.27□□□□□ -0.77
CDK9-205ENST00000498339 ZNF195O14628 629 aa10.27□□□□□ -0.77
CDK9-205ENST00000498339 RGS14O43566 566 aa10.27□□□□□ -0.77
CDK9-205ENST00000498339 SUPT7LO94864 414 aa10.27□□□□□ -0.77
CDK9-205ENST00000498339 IGHV3-9P01782 118 aa10.27□□□□□ -0.77
CDK9-205ENST00000498339 LINGO3P0C6S8 592 aa10.27□□□□□ -0.77
CDK9-205ENST00000498339 HTR6P50406 440 aa10.27□□□□□ -0.77
CDK9-205ENST00000498339 RNF144AP50876 292 aaPredicted RBP10.27□□□□□ -0.77
CDK9-205ENST00000498339 PLTPP55058 493 aa10.27□□□□□ -0.77
CDK9-205ENST00000498339 CLCQ05315 142 aa10.27□□□□□ -0.77
CDK9-205ENST00000498339 MLC1Q15049 377 aa10.27□□□□□ -0.77
CDK9-205ENST00000498339 IMPG1Q17R60 797 aa10.27□□□□□ -0.77
CDK9-205ENST00000498339 PRSS53Q2L4Q9 553 aa10.27□□□□□ -0.77
CDK9-205ENST00000498339 GPRIN3Q6ZVF9 776 aa10.27□□□□□ -0.77
CDK9-205ENST00000498339 CREG2Q8IUH2 290 aa10.27□□□□□ -0.77
CDK9-205ENST00000498339 TMCO5AQ8N6Q1 288 aa10.27□□□□□ -0.77
CDK9-205ENST00000498339 C3orf56Q8N813 242 aa10.27□□□□□ -0.77
CDK9-205ENST00000498339 FBXO27Q8NI29 283 aa10.27□□□□□ -0.77
CDK9-205ENST00000498339 PUM2Q8TB72 1066 aaKnown RBP eCLIP10.27□□□□□ -0.77
CDK9-205ENST00000498339 METTL6Q8TCB7 284 aa10.27□□□□□ -0.77
CDK9-205ENST00000498339 PHOSPHO1Q8TCT1 267 aa10.27□□□□□ -0.77
CDK9-205ENST00000498339 JADE3Q92613 823 aa10.27□□□□□ -0.77
CDK9-205ENST00000498339 FBXO17Q96EF6 278 aa10.27□□□□□ -0.77
CDK9-205ENST00000498339 OTUB1Q96FW1 271 aaPredicted RBP10.27□□□□□ -0.77
CDK9-205ENST00000498339 CHMP6Q96FZ7 201 aa10.27□□□□□ -0.77
CDK9-205ENST00000498339 AMDHD1Q96NU7 426 aa10.27□□□□□ -0.77
CDK9-205ENST00000498339 C1QTNF6Q9BXI9 259 aa10.27□□□□□ -0.77
CDK9-205ENST00000498339 OCEL1Q9H607 264 aa10.27□□□□□ -0.77
CDK9-205ENST00000498339 COQ10BQ9H8M1 238 aa10.27□□□□□ -0.77
CDK9-205ENST00000498339 FKRPQ9H9S5 495 aa10.27□□□□□ -0.77
CDK9-205ENST00000498339 BCO1Q9HAY6 547 aa10.27□□□□□ -0.77
CDK9-205ENST00000498339 ZNF225Q9UK10 706 aa10.27□□□□□ -0.77
CDK9-205ENST00000498339 GRID1Q9ULK0 1009 aa10.27□□□□□ -0.77
CDK9-205ENST00000498339 GOLGA8QA0A0J9YX86 632 aa10.26□□□□□ -0.77
CDK9-205ENST00000498339 GOLGA8OA6NCC3 632 aa10.26□□□□□ -0.77
CDK9-205ENST00000498339 FAM187AA6NFU0 413 aa10.26□□□□□ -0.77
CDK9-205ENST00000498339 A8MT66 165 aa10.26□□□□□ -0.77
CDK9-205ENST00000498339 VWC2LB2RUY7 222 aa10.26□□□□□ -0.77
CDK9-205ENST00000498339 GOLGA8NF8WBI6 632 aa10.26□□□□□ -0.77
CDK9-205ENST00000498339 GOLGA8RI6L899 631 aa10.26□□□□□ -0.77
CDK9-205ENST00000498339 ZSCAN12O43309 604 aa10.26□□□□□ -0.77
CDK9-205ENST00000498339 NGFRP08138 427 aa10.26□□□□□ -0.77
CDK9-205ENST00000498339 PRPS2P11908 318 aa10.26□□□□□ -0.77
CDK9-205ENST00000498339 EDNRAP25101 427 aa10.26□□□□□ -0.77
CDK9-205ENST00000498339 SNRPD2P62316 118 aaKnown RBP10.26□□□□□ -0.77
CDK9-205ENST00000498339 ZNF117Q03924 483 aa10.26□□□□□ -0.77
CDK9-205ENST00000498339 CD226Q15762 336 aa10.26□□□□□ -0.77
CDK9-205ENST00000498339 CCNJQ5T5M9 372 aa10.26□□□□□ -0.77
CDK9-205ENST00000498339 RINLQ6ZS11 566 aa10.26□□□□□ -0.77
CDK9-205ENST00000498339 ZNF551Q7Z340 670 aaPredicted RBP10.26□□□□□ -0.77
CDK9-205ENST00000498339 SLC46A3Q7Z3Q1 461 aa10.26□□□□□ -0.77
CDK9-205ENST00000498339 GALNT5Q7Z7M9 940 aa10.26□□□□□ -0.77
CDK9-205ENST00000498339 ZAR1Q86SH2 424 aa10.26□□□□□ -0.77
CDK9-205ENST00000498339 ZNF433Q8N7K0 673 aaPredicted RBP10.26□□□□□ -0.77
CDK9-205ENST00000498339 COX18Q8N8Q8 333 aa10.26□□□□□ -0.77
CDK9-205ENST00000498339 CDRT4Q8N9R6 151 aa10.26□□□□□ -0.77
CDK9-205ENST00000498339 VRK1Q99986 396 aaPredicted RBP10.26□□□□□ -0.77
CDK9-205ENST00000498339 BPESC1Q9GZL8 116 aa10.26□□□□□ -0.77
CDK9-205ENST00000498339 MRPL46Q9H2W6 279 aaKnown RBP10.26□□□□□ -0.77
CDK9-205ENST00000498339 UBQLN4Q9NRR5 601 aa10.26□□□□□ -0.77
CDK9-205ENST00000498339 GRHL1Q9NZI5 618 aa10.26□□□□□ -0.77
CDK9-205ENST00000498339 NTMQ9P121 344 aa10.26□□□□□ -0.77
CDK9-205ENST00000498339 POLR3HQ9Y535 204 aaPredicted RBP10.26□□□□□ -0.77
CDK9-205ENST00000498339 GPC6Q9Y625 555 aaPredicted RBP10.26□□□□□ -0.77
CDK9-205ENST00000498339 SAR1BQ9Y6B6 198 aa10.26□□□□□ -0.77
CDK9-205ENST00000498339 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.26□□□□□ -0.77
CDK9-205ENST00000498339 LOC390937A0A1W2PQ73 354 aa10.25□□□□□ -0.77
CDK9-205ENST00000498339 CCDC151A5D8V7 595 aa10.25□□□□□ -0.77
CDK9-205ENST00000498339 RAD51CO43502 376 aa10.25□□□□□ -0.77
CDK9-205ENST00000498339 CYTIPO60759 359 aa10.25□□□□□ -0.77
CDK9-205ENST00000498339 KCNK2O95069 426 aa10.25□□□□□ -0.77
CDK9-205ENST00000498339 NKX2-2O95096 273 aa10.25□□□□□ -0.77
CDK9-205ENST00000498339 PGM3O95394 542 aa10.25□□□□□ -0.77
CDK9-205ENST00000498339 ACP2P11117 423 aa10.25□□□□□ -0.77
CDK9-205ENST00000498339 ZNF23P17027 643 aa10.25□□□□□ -0.77
CDK9-205ENST00000498339 HSD17B3P37058 310 aa10.25□□□□□ -0.77
CDK9-205ENST00000498339 CCR4P51679 360 aa10.25□□□□□ -0.77
CDK9-205ENST00000498339 RAC3P60763 192 aa10.25□□□□□ -0.77
CDK9-205ENST00000498339 PHC1P78364 1004 aa10.25□□□□□ -0.77
CDK9-205ENST00000498339 SELENBP1Q13228 472 aa10.25□□□□□ -0.77
CDK9-205ENST00000498339 FAM174BQ3ZCQ3 159 aa10.25□□□□□ -0.77
CDK9-205ENST00000498339 ZNF614Q8N883 585 aa10.25□□□□□ -0.77
CDK9-205ENST00000498339 NUP43Q8NFH3 380 aa10.25□□□□□ -0.77
CDK9-205ENST00000498339 TOR1AIP2Q8NFQ8 470 aa10.25□□□□□ -0.77
CDK9-205ENST00000498339 OR6Y1Q8NGX8 325 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms