RNA–Protein interactions for RNA: ENST00000497488.1

BRCA1-224, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-224ENST00000497488 LATO43561 262 aa5.32□□□□□ -1.56
BRCA1-224ENST00000497488 PRKAB2O43741 272 aa5.32□□□□□ -1.56
BRCA1-224ENST00000497488 STX11O75558 287 aa5.32□□□□□ -1.56
BRCA1-224ENST00000497488 BCAR3O75815 825 aa5.32□□□□□ -1.56
BRCA1-224ENST00000497488 LRATO95237 230 aa5.32□□□□□ -1.56
BRCA1-224ENST00000497488 BAG4O95429 457 aaKnown RBP5.32□□□□□ -1.56
BRCA1-224ENST00000497488 ECDO95905 644 aaPredicted RBP5.32□□□□□ -1.56
BRCA1-224ENST00000497488 H2BFMP0C1H6 154 aa5.32□□□□□ -1.56
BRCA1-224ENST00000497488 FAM157CP0CG43 387 aa5.32□□□□□ -1.56
BRCA1-224ENST00000497488 CCL2P13500 99 aa5.32□□□□□ -1.56
BRCA1-224ENST00000497488 HLA-DOBP13765 273 aa5.32□□□□□ -1.56
BRCA1-224ENST00000497488 ACADSP16219 412 aa5.32□□□□□ -1.56
BRCA1-224ENST00000497488 STOMP27105 288 aa5.32□□□□□ -1.56
BRCA1-224ENST00000497488 CD1CP29017 333 aa5.32□□□□□ -1.56
BRCA1-224ENST00000497488 CCKBRP32239 447 aa5.32□□□□□ -1.56
BRCA1-224ENST00000497488 MAGEA9P43362 315 aa5.32□□□□□ -1.56
BRCA1-224ENST00000497488 BRCC3P46736 316 aa5.32□□□□□ -1.56
BRCA1-224ENST00000497488 POU3F1Q03052 451 aaPredicted RBP5.32□□□□□ -1.56
BRCA1-224ENST00000497488 EFEMP1Q12805 493 aa5.32□□□□□ -1.56
BRCA1-224ENST00000497488 GPS2Q13227 327 aa5.32□□□□□ -1.56
BRCA1-224ENST00000497488 SRSF9Q13242 221 aaKnown RBP eCLIP5.32□□□□□ -1.56
BRCA1-224ENST00000497488 ITPK1Q13572 414 aa5.32□□□□□ -1.56
BRCA1-224ENST00000497488 ANGPT1Q15389 498 aa5.32□□□□□ -1.56
BRCA1-224ENST00000497488 USF2Q15853 346 aaPredicted RBP5.32□□□□□ -1.56
BRCA1-224ENST00000497488 MRPL23Q16540 153 aaKnown RBP5.32□□□□□ -1.56
BRCA1-224ENST00000497488 CALCRLQ16602 461 aa5.32□□□□□ -1.56
BRCA1-224ENST00000497488 ODF3L2Q3SX64 289 aa5.32□□□□□ -1.56
BRCA1-224ENST00000497488 GLYR1Q49A26 553 aaPredicted RBP5.32□□□□□ -1.56
BRCA1-224ENST00000497488 XKR6Q5GH73 641 aa5.32□□□□□ -1.56
BRCA1-224ENST00000497488 CLEC6AQ6EIG7 209 aa5.32□□□□□ -1.56
BRCA1-224ENST00000497488 ZNF66Q6ZN08 573 aa5.32□□□□□ -1.56
BRCA1-224ENST00000497488 FCRLAQ7L513 359 aa5.32□□□□□ -1.56
BRCA1-224ENST00000497488 COPS6Q7L5N1 327 aa5.32□□□□□ -1.56
BRCA1-224ENST00000497488 DEFB132Q7Z7B7 95 aa5.32□□□□□ -1.56
BRCA1-224ENST00000497488 RNF130Q86XS8 419 aa5.32□□□□□ -1.56
BRCA1-224ENST00000497488 KMT5CQ86Y97 462 aa5.32□□□□□ -1.56
BRCA1-224ENST00000497488 MFSD6LQ8IWD5 586 aa5.32□□□□□ -1.56
BRCA1-224ENST00000497488 TCEANCQ8N8B7 351 aa5.32□□□□□ -1.56
BRCA1-224ENST00000497488 PRR26Q8N8Z3 221 aa5.32□□□□□ -1.56
BRCA1-224ENST00000497488 FNDC5Q8NAU1 212 aa5.32□□□□□ -1.56
BRCA1-224ENST00000497488 DMBX1Q8NFW5 382 aa5.32□□□□□ -1.56
BRCA1-224ENST00000497488 OR5T3Q8NGG3 340 aa5.32□□□□□ -1.56
BRCA1-224ENST00000497488 OR13C9Q8NGT0 318 aa5.32□□□□□ -1.56
BRCA1-224ENST00000497488 BADQ92934 168 aa5.32□□□□□ -1.56
BRCA1-224ENST00000497488 SLC47A1Q96FL8 570 aa5.32□□□□□ -1.56
BRCA1-224ENST00000497488 CYTH2Q99418 400 aa5.32□□□□□ -1.56
BRCA1-224ENST00000497488 SLC6A7Q99884 636 aa5.32□□□□□ -1.56
BRCA1-224ENST00000497488 APOOQ9BUR5 198 aa5.32□□□□□ -1.56
BRCA1-224ENST00000497488 COMMD4Q9H0A8 199 aa5.32□□□□□ -1.56
BRCA1-224ENST00000497488 FNDC4Q9H6D8 234 aaPredicted RBP5.32□□□□□ -1.56
BRCA1-224ENST00000497488 PANK3Q9H999 370 aa5.32□□□□□ -1.56
BRCA1-224ENST00000497488 LYARQ9NX58 379 aaKnown RBP5.32□□□□□ -1.56
BRCA1-224ENST00000497488 MRPL39Q9NYK5 338 aaKnown RBP5.32□□□□□ -1.56
BRCA1-224ENST00000497488 CYTH4Q9UIA0 394 aa5.32□□□□□ -1.56
BRCA1-224ENST00000497488 RNF24Q9Y225 148 aa5.32□□□□□ -1.56
BRCA1-224ENST00000497488 BLMP54132 1417 aaPredicted RBP5.31□□□□□ -1.56
BRCA1-224ENST00000497488 FAM208AQ9UK61 1670 aaKnown RBP5.31□□□□□ -1.56
BRCA1-224ENST00000497488 MYH14Q7Z406 1995 aaKnown RBP5.31□□□□□ -1.56
BRCA1-224ENST00000497488 WDR33Q9C0J8 1336 aaKnown RBP5.31□□□□□ -1.56
BRCA1-224ENST00000497488 TRAV6A0A075B6T7 132 aa5.31□□□□□ -1.56
BRCA1-224ENST00000497488 TRBV4-1A0A0J9YWV2 114 aa5.31□□□□□ -1.56
BRCA1-224ENST00000497488 A0A1W2PPI3 338 aa5.31□□□□□ -1.56
BRCA1-224ENST00000497488 OTOL1A6NHN0 477 aaPredicted RBP5.31□□□□□ -1.56
BRCA1-224ENST00000497488 LINC01548A6NM66 108 aa5.31□□□□□ -1.56
BRCA1-224ENST00000497488 SERPINE3A8MV23 424 aa5.31□□□□□ -1.56
BRCA1-224ENST00000497488 TRAFD1O14545 582 aaPredicted RBP5.31□□□□□ -1.56
BRCA1-224ENST00000497488 CLOCKO15516 846 aa5.31□□□□□ -1.56
BRCA1-224ENST00000497488 OR2J3O76001 311 aa5.31□□□□□ -1.56
BRCA1-224ENST00000497488 ALOX5P09917 674 aa5.31□□□□□ -1.56
BRCA1-224ENST00000497488 XRCC1P18887 633 aaPredicted RBP5.31□□□□□ -1.56
BRCA1-224ENST00000497488 RPL13AP40429 203 aaKnown RBP5.31□□□□□ -1.56
BRCA1-224ENST00000497488 BDKRB1P46663 353 aa5.31□□□□□ -1.56
BRCA1-224ENST00000497488 DCDC1P59894 354 aa5.31□□□□□ -1.56
BRCA1-224ENST00000497488 RPL27P61353 136 aaKnown RBP5.31□□□□□ -1.56
BRCA1-224ENST00000497488 NTHL1P78549 312 aa5.31□□□□□ -1.56
BRCA1-224ENST00000497488 RPL24P83731 157 aaKnown RBP5.31□□□□□ -1.56
BRCA1-224ENST00000497488 PTGR1Q14914 329 aa5.31□□□□□ -1.56
BRCA1-224ENST00000497488 KIR2DS3Q14952 304 aa5.31□□□□□ -1.56
BRCA1-224ENST00000497488 ETFDHQ16134 617 aa5.31□□□□□ -1.56
BRCA1-224ENST00000497488 BEND3Q5T5X7 828 aa5.31□□□□□ -1.56
BRCA1-224ENST00000497488 GPR157Q5UAW9 335 aa5.31□□□□□ -1.56
BRCA1-224ENST00000497488 LCN1P1Q5VSP4 162 aa5.31□□□□□ -1.56
BRCA1-224ENST00000497488 PNCKQ6P2M8 343 aa5.31□□□□□ -1.56
BRCA1-224ENST00000497488 PAQR6Q6TCH4 344 aa5.31□□□□□ -1.56
BRCA1-224ENST00000497488 ZNF782Q6ZMW2 699 aaPredicted RBP5.31□□□□□ -1.56
BRCA1-224ENST00000497488 Q71RC1 249 aaPredicted RBP5.31□□□□□ -1.56
BRCA1-224ENST00000497488 ST13P4Q8IZP2 240 aaPredicted RBP5.31□□□□□ -1.56
BRCA1-224ENST00000497488 FAM98AQ8NCA5 519 aaKnown RBP5.31□□□□□ -1.56
BRCA1-224ENST00000497488 SEMA6DQ8NFY4 1073 aa5.31□□□□□ -1.56
BRCA1-224ENST00000497488 ZNF473Q8WTR7 871 aaKnown RBP5.31□□□□□ -1.56
BRCA1-224ENST00000497488 DLX4Q92988 240 aaPredicted RBP5.31□□□□□ -1.56
BRCA1-224ENST00000497488 ART4Q93070 314 aa5.31□□□□□ -1.56
BRCA1-224ENST00000497488 SCMH1Q96GD3 660 aa5.31□□□□□ -1.56
BRCA1-224ENST00000497488 NSL1Q96IY1 281 aa5.31□□□□□ -1.56
BRCA1-224ENST00000497488 CPXM1Q96SM3 734 aa5.31□□□□□ -1.56
BRCA1-224ENST00000497488 FMO2Q99518 471 aa5.31□□□□□ -1.56
BRCA1-224ENST00000497488 FEM1AQ9BSK4 669 aa5.31□□□□□ -1.56
BRCA1-224ENST00000497488 DUSP16Q9BY84 665 aa5.31□□□□□ -1.56
BRCA1-224ENST00000497488 OR52A5Q9H2C5 316 aa5.31□□□□□ -1.56
BRCA1-224ENST00000497488 ANKRD19PQ9H560 264 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms