RNA–Protein interactions for RNA: ENST00000497106.5

USP54-215, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 2

Gene USP54, Length 4,773 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-215ENST00000497106 AHSA2Q719I0 299 aa7.72□□□□□ -1.17
USP54-215ENST00000497106 CHMP1BQ7LBR1 199 aa7.72□□□□□ -1.17
USP54-215ENST00000497106 CLDN22Q8N7P3 220 aa7.72□□□□□ -1.17
USP54-215ENST00000497106 ZBTB8BQ8NAP8 495 aaPredicted RBP7.72□□□□□ -1.17
USP54-215ENST00000497106 KBTBD8Q8NFY9 601 aa7.72□□□□□ -1.17
USP54-215ENST00000497106 ZDHHC19Q8WVZ1 309 aaPredicted RBP7.72□□□□□ -1.17
USP54-215ENST00000497106 ST8SIA1Q92185 356 aa7.72□□□□□ -1.17
USP54-215ENST00000497106 GATA6Q92908 595 aa7.72□□□□□ -1.17
USP54-215ENST00000497106 UCN3Q969E3 161 aa7.72□□□□□ -1.17
USP54-215ENST00000497106 FAM46AQ96IP4 442 aaKnown RBP7.72□□□□□ -1.17
USP54-215ENST00000497106 CNOT2Q9NZN8 540 aaKnown RBP7.72□□□□□ -1.17
USP54-215ENST00000497106 LRRK1Q38SD2 2015 aa7.72□□□□□ -1.17
USP54-215ENST00000497106 A0A1W2PRG6 482 aa7.72□□□□□ -1.17
USP54-215ENST00000497106 ZNF99A8MXY4 864 aaPredicted RBP7.72□□□□□ -1.17
USP54-215ENST00000497106 GCGRP47871 477 aa7.72□□□□□ -1.17
USP54-215ENST00000497106 PCYT1AP49585 367 aa7.72□□□□□ -1.17
USP54-215ENST00000497106 RUNX1T1Q06455 604 aa7.72□□□□□ -1.17
USP54-215ENST00000497106 TCEAL6Q6IPX3 200 aa7.72□□□□□ -1.17
USP54-215ENST00000497106 ADCK1Q86TW2 530 aa7.72□□□□□ -1.17
USP54-215ENST00000497106 GATSQ8NAP1 163 aa7.72□□□□□ -1.17
USP54-215ENST00000497106 OR5W2Q8NH69 310 aa7.72□□□□□ -1.17
USP54-215ENST00000497106 TCEAL3Q969E4 200 aa7.72□□□□□ -1.17
USP54-215ENST00000497106 PMEPA1Q969W9 287 aa7.72□□□□□ -1.17
USP54-215ENST00000497106 BPIFA2Q96DR5 249 aa7.72□□□□□ -1.17
USP54-215ENST00000497106 NAA11Q9BSU3 229 aaPredicted RBP7.72□□□□□ -1.17
USP54-215ENST00000497106 ATP13A2Q9NQ11 1180 aa7.72□□□□□ -1.17
USP54-215ENST00000497106 RABL2AQ9UBK7 228 aaPredicted RBP7.72□□□□□ -1.17
USP54-215ENST00000497106 CDV3Q9UKY7 258 aaKnown RBP7.72□□□□□ -1.17
USP54-215ENST00000497106 A0A1B0GWA3 101 aa7.72□□□□□ -1.17
USP54-215ENST00000497106 J3KTA2 159 aa7.72□□□□□ -1.17
USP54-215ENST00000497106 TO15178 435 aa7.72□□□□□ -1.17
USP54-215ENST00000497106 PFDN1O60925 122 aa7.72□□□□□ -1.17
USP54-215ENST00000497106 SEMG1P04279 462 aa7.72□□□□□ -1.17
USP54-215ENST00000497106 CT62P0C5K7 136 aa7.72□□□□□ -1.17
USP54-215ENST00000497106 ITGA3P26006 1051 aa7.72□□□□□ -1.17
USP54-215ENST00000497106 ACTC1P68032 377 aa7.72□□□□□ -1.17
USP54-215ENST00000497106 ACTA1P68133 377 aa7.72□□□□□ -1.17
USP54-215ENST00000497106 MAD2L1BPQ15013 274 aaPredicted RBP7.72□□□□□ -1.17
USP54-215ENST00000497106 EBPQ15125 230 aaKnown RBP7.72□□□□□ -1.17
USP54-215ENST00000497106 MEP1AQ16819 746 aa7.72□□□□□ -1.17
USP54-215ENST00000497106 ZBED5Q49AG3 693 aa7.72□□□□□ -1.17
USP54-215ENST00000497106 PGBD2Q6P3X8 592 aa7.72□□□□□ -1.17
USP54-215ENST00000497106 SMARCD3Q6STE5 483 aa7.72□□□□□ -1.17
USP54-215ENST00000497106 PSD4Q8NDX1 1056 aa7.72□□□□□ -1.17
USP54-215ENST00000497106 TMEM52Q8NDY8 209 aa7.72□□□□□ -1.17
USP54-215ENST00000497106 TMEM80Q96HE8 168 aa7.72□□□□□ -1.17
USP54-215ENST00000497106 SGCZQ96LD1 299 aa7.72□□□□□ -1.17
USP54-215ENST00000497106 CEP19Q96LK0 163 aa7.72□□□□□ -1.17
USP54-215ENST00000497106 MND1Q9BWT6 205 aa7.72□□□□□ -1.17
USP54-215ENST00000497106 NTN4Q9HB63 628 aa7.72□□□□□ -1.17
USP54-215ENST00000497106 NANSQ9NR45 359 aa7.72□□□□□ -1.17
USP54-215ENST00000497106 GSTK1Q9Y2Q3 226 aa7.72□□□□□ -1.17
USP54-215ENST00000497106 IGLV3-12A0A075B6K2 115 aa7.72□□□□□ -1.17
USP54-215ENST00000497106 A0A087WZY1 265 aa7.72□□□□□ -1.17
USP54-215ENST00000497106 SLC22A31A6NKX4 558 aa7.72□□□□□ -1.17
USP54-215ENST00000497106 SLC1A7O00341 560 aa7.72□□□□□ -1.17
USP54-215ENST00000497106 IDH3BO43837 385 aa7.72□□□□□ -1.17
USP54-215ENST00000497106 MITFO75030 526 aaPredicted RBP7.72□□□□□ -1.17
USP54-215ENST00000497106 MT-ATP6P00846 226 aa7.72□□□□□ -1.17
USP54-215ENST00000497106 CAPNS1P04632 268 aa7.72□□□□□ -1.17
USP54-215ENST00000497106 GKN3PP0CG01 181 aa7.72□□□□□ -1.17
USP54-215ENST00000497106 FMO3P31513 532 aa7.72□□□□□ -1.17
USP54-215ENST00000497106 MAN2A2P49641 1150 aa7.72□□□□□ -1.17
USP54-215ENST00000497106 PRSS53Q2L4Q9 553 aa7.72□□□□□ -1.17
USP54-215ENST00000497106 HES3Q5TGS1 186 aa7.72□□□□□ -1.17
USP54-215ENST00000497106 KCTD8Q6ZWB6 473 aa7.72□□□□□ -1.17
USP54-215ENST00000497106 PRR22Q8IZ63 422 aa7.72□□□□□ -1.17
USP54-215ENST00000497106 MAML2Q8IZL2 1156 aaPredicted RBP7.72□□□□□ -1.17
USP54-215ENST00000497106 OR5M3Q8NGP4 307 aa7.72□□□□□ -1.17
USP54-215ENST00000497106 HAVCR2Q8TDQ0 301 aa7.72□□□□□ -1.17
USP54-215ENST00000497106 PTPMT1Q8WUK0 201 aaPredicted RBP7.72□□□□□ -1.17
USP54-215ENST00000497106 PITX2Q99697 317 aa7.72□□□□□ -1.17
USP54-215ENST00000497106 BCL7BQ9BQE9 202 aa7.72□□□□□ -1.17
USP54-215ENST00000497106 QRSL1Q9H0R6 528 aaKnown RBP7.72□□□□□ -1.17
USP54-215ENST00000497106 NXF5Q9H1B4 397 aaKnown RBP7.72□□□□□ -1.17
USP54-215ENST00000497106 COMMD3-BMI1R4GMX3 469 aa7.72□□□□□ -1.17
USP54-215ENST00000497106 DSPPQ9NZW4 1301 aa7.72□□□□□ -1.17
USP54-215ENST00000497106 A6NHS1 94 aa7.71□□□□□ -1.17
USP54-215ENST00000497106 FCMRO60667 390 aa7.71□□□□□ -1.17
USP54-215ENST00000497106 TMCC2O75069 709 aa7.71□□□□□ -1.17
USP54-215ENST00000497106 TNFSF15O95150 251 aa7.71□□□□□ -1.17
USP54-215ENST00000497106 RAB36O95755 333 aa7.71□□□□□ -1.17
USP54-215ENST00000497106 HPP00738 406 aa7.71□□□□□ -1.17
USP54-215ENST00000497106 MMP11P24347 488 aa7.71□□□□□ -1.17
USP54-215ENST00000497106 CDH11P55287 796 aa7.71□□□□□ -1.17
USP54-215ENST00000497106 SLC37A1P57057 533 aa7.71□□□□□ -1.17
USP54-215ENST00000497106 KLHL12Q53G59 568 aa7.71□□□□□ -1.17
USP54-215ENST00000497106 STPG1Q5TH74 334 aa7.71□□□□□ -1.17
USP54-215ENST00000497106 SLX4IPQ5VYV7 408 aa7.71□□□□□ -1.17
USP54-215ENST00000497106 FAM205BPQ63HN1 556 aa7.71□□□□□ -1.17
USP54-215ENST00000497106 GPR139Q6DWJ6 353 aa7.71□□□□□ -1.17
USP54-215ENST00000497106 CD300LDQ6UXZ3 194 aa7.71□□□□□ -1.17
USP54-215ENST00000497106 B3GNT6Q6ZMB0 384 aa7.71□□□□□ -1.17
USP54-215ENST00000497106 ZNF367Q7RTV3 350 aa7.71□□□□□ -1.17
USP54-215ENST00000497106 GRINAQ7Z429 371 aa7.71□□□□□ -1.17
USP54-215ENST00000497106 TMPRSS12Q86WS5 348 aa7.71□□□□□ -1.17
USP54-215ENST00000497106 RPS19BP1Q86WX3 136 aaKnown RBP7.71□□□□□ -1.17
USP54-215ENST00000497106 THAP3Q8WTV1 239 aaPredicted RBP7.71□□□□□ -1.17
USP54-215ENST00000497106 SLC25A43Q8WUT9 341 aaPredicted RBP7.71□□□□□ -1.17
USP54-215ENST00000497106 SECISBP2Q96T21 854 aaKnown RBP7.71□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms