RNA–Protein interactions for RNA: ENST00000496785.5

CTDSP1-213, Transcript of CTD small phosphatase 1, humanhuman

TSL 5

Gene CTDSP1, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-213ENST00000496785 TUBA1CQ9BQE3 449 aa17.39■□□□□ 0.37
CTDSP1-213ENST00000496785 ARMC7Q9H6L4 198 aa17.39■□□□□ 0.37
CTDSP1-213ENST00000496785 A4GALTQ9NPC4 353 aa17.39■□□□□ 0.37
CTDSP1-213ENST00000496785 EXOSC3Q9NQT5 275 aaKnown RBP17.39■□□□□ 0.37
CTDSP1-213ENST00000496785 SLC25A37Q9NYZ2 338 aa17.39■□□□□ 0.37
CTDSP1-213ENST00000496785 VAPAQ9P0L0 249 aa17.39■□□□□ 0.37
CTDSP1-213ENST00000496785 TRBV5-3A0A0A0MS03 114 aa17.38■□□□□ 0.37
CTDSP1-213ENST00000496785 A0A0G2JPF8 293 aa17.38■□□□□ 0.37
CTDSP1-213ENST00000496785 MBD3L4A6NDZ8 208 aaPredicted RBP17.38■□□□□ 0.37
CTDSP1-213ENST00000496785 MBD3L3A6NE82 208 aaPredicted RBP17.38■□□□□ 0.37
CTDSP1-213ENST00000496785 MBD3L5A6NJ08 208 aaPredicted RBP17.38■□□□□ 0.37
CTDSP1-213ENST00000496785 HNRNPCL2B2RXH8 293 aa17.38■□□□□ 0.37
CTDSP1-213ENST00000496785 HNRNPCL3B7ZW38 293 aa17.38■□□□□ 0.37
CTDSP1-213ENST00000496785 HNRNPCL1O60812 293 aaKnown RBP17.38■□□□□ 0.37
CTDSP1-213ENST00000496785 CCDC22O60826 627 aa17.38■□□□□ 0.37
CTDSP1-213ENST00000496785 TFPTP0C1Z6 253 aa17.38■□□□□ 0.37
CTDSP1-213ENST00000496785 LINGO3P0C6S8 592 aa17.38■□□□□ 0.37
CTDSP1-213ENST00000496785 UBTFL6P0CB48 400 aaPredicted RBP17.38■□□□□ 0.37
CTDSP1-213ENST00000496785 HNRNPCL4P0DMR1 293 aa17.38■□□□□ 0.37
CTDSP1-213ENST00000496785 NID1P14543 1247 aa17.38■□□□□ 0.37
CTDSP1-213ENST00000496785 UQCRBP14927 111 aa17.38■□□□□ 0.37
CTDSP1-213ENST00000496785 SLC6A8P48029 635 aa17.38■□□□□ 0.37
CTDSP1-213ENST00000496785 RAC1P63000 192 aa17.38■□□□□ 0.37
CTDSP1-213ENST00000496785 SKP2Q13309 424 aa17.38■□□□□ 0.37
CTDSP1-213ENST00000496785 NFYCQ13952 458 aa17.38■□□□□ 0.37
CTDSP1-213ENST00000496785 MAPK14Q16539 360 aa17.38■□□□□ 0.37
CTDSP1-213ENST00000496785 MMEL1Q495T6 779 aa17.38■□□□□ 0.37
CTDSP1-213ENST00000496785 LIN52Q52LA3 116 aa17.38■□□□□ 0.37
CTDSP1-213ENST00000496785 COQ5Q5HYK3 327 aa17.38■□□□□ 0.37
CTDSP1-213ENST00000496785 PDSS1Q5T2R2 415 aa17.38■□□□□ 0.37
CTDSP1-213ENST00000496785 GCNT6Q5T4J0 391 aa17.38■□□□□ 0.37
CTDSP1-213ENST00000496785 OLIG3Q7RTU3 272 aa17.38■□□□□ 0.37
CTDSP1-213ENST00000496785 LILRB4Q8NHJ6 448 aa17.38■□□□□ 0.37
CTDSP1-213ENST00000496785 MBD3L2Q8NHZ7 208 aaPredicted RBP17.38■□□□□ 0.37
CTDSP1-213ENST00000496785 BBS10Q8TAM1 723 aa17.38■□□□□ 0.37
CTDSP1-213ENST00000496785 GPR119Q8TDV5 335 aa17.38■□□□□ 0.37
CTDSP1-213ENST00000496785 SLC38A5Q8WUX1 472 aa17.38■□□□□ 0.37
CTDSP1-213ENST00000496785 C10orf82Q8WW14 230 aa17.38■□□□□ 0.37
CTDSP1-213ENST00000496785 ST8SIA1Q92185 356 aa17.38■□□□□ 0.37
CTDSP1-213ENST00000496785 SMPDL3BQ92485 455 aa17.38■□□□□ 0.37
CTDSP1-213ENST00000496785 WNT2BQ93097 391 aa17.38■□□□□ 0.37
CTDSP1-213ENST00000496785 TMEM19Q96HH6 336 aa17.38■□□□□ 0.37
CTDSP1-213ENST00000496785 MRGPRX4Q96LA9 322 aa17.38■□□□□ 0.37
CTDSP1-213ENST00000496785 RNF145Q96MT1 663 aa17.38■□□□□ 0.37
CTDSP1-213ENST00000496785 SAR1AQ9NR31 198 aa17.38■□□□□ 0.37
CTDSP1-213ENST00000496785 PRDM4Q9UKN5 801 aa17.38■□□□□ 0.37
CTDSP1-213ENST00000496785 CAPN7Q9Y6W3 813 aa17.38■□□□□ 0.37
CTDSP1-213ENST00000496785 DSPPQ9NZW4 1301 aa17.38■□□□□ 0.37
CTDSP1-213ENST00000496785 PTPN13Q12923 2485 aa17.37■□□□□ 0.37
CTDSP1-213ENST00000496785 GJE1A6NN92 205 aa17.37■□□□□ 0.37
CTDSP1-213ENST00000496785 CLCA1A8K7I4 914 aa17.37■□□□□ 0.37
CTDSP1-213ENST00000496785 SEC14L5O43304 696 aa17.37■□□□□ 0.37
CTDSP1-213ENST00000496785 GPX2P18283 190 aa17.37■□□□□ 0.37
CTDSP1-213ENST00000496785 RPS4Y1P22090 263 aaKnown RBP17.37■□□□□ 0.37
CTDSP1-213ENST00000496785 HTR1EP28566 365 aa17.37■□□□□ 0.37
CTDSP1-213ENST00000496785 CEACAM8P31997 349 aaPredicted RBP17.37■□□□□ 0.37
CTDSP1-213ENST00000496785 PGM1P36871 562 aa17.37■□□□□ 0.37
CTDSP1-213ENST00000496785 RNF144AP50876 292 aaPredicted RBP17.37■□□□□ 0.37
CTDSP1-213ENST00000496785 EEF1A1P68104 462 aaKnown RBP17.37■□□□□ 0.37
CTDSP1-213ENST00000496785 SF3A3Q12874 501 aaKnown RBP eCLIP17.37■□□□□ 0.371e-6■■■■□ 21.1
CTDSP1-213ENST00000496785 FOXF1Q12946 379 aa17.37■□□□□ 0.37
CTDSP1-213ENST00000496785 KLF10Q13118 480 aa17.37■□□□□ 0.37
CTDSP1-213ENST00000496785 LARS2Q15031 903 aaKnown RBP17.37■□□□□ 0.37
CTDSP1-213ENST00000496785 NDUFAF6Q330K2 333 aa17.37■□□□□ 0.37
CTDSP1-213ENST00000496785 SLC25A35Q3KQZ1 300 aa17.37■□□□□ 0.37
CTDSP1-213ENST00000496785 EEF1A1P5Q5VTE0 462 aa17.37■□□□□ 0.37
CTDSP1-213ENST00000496785 SPATA21Q7Z572 469 aa17.37■□□□□ 0.37
CTDSP1-213ENST00000496785 ADGRE4PQ86SQ3 457 aa17.37■□□□□ 0.37
CTDSP1-213ENST00000496785 GRAMD2AQ8IUY3 354 aa17.37■□□□□ 0.37
CTDSP1-213ENST00000496785 MSRB3Q8IXL7 192 aa17.37■□□□□ 0.37
CTDSP1-213ENST00000496785 ZNF440Q8IYI8 595 aa17.37■□□□□ 0.37
CTDSP1-213ENST00000496785 FAM71CQ8NEG0 241 aa17.37■□□□□ 0.37
CTDSP1-213ENST00000496785 OR5M1Q8NGP8 315 aa17.37■□□□□ 0.37
CTDSP1-213ENST00000496785 CGREF1Q99674 301 aa17.37■□□□□ 0.37
CTDSP1-213ENST00000496785 TREX2Q9BQ50 279 aaPredicted RBP17.37■□□□□ 0.37
CTDSP1-213ENST00000496785 RUBCNLQ9H714 662 aa17.37■□□□□ 0.37
CTDSP1-213ENST00000496785 SLAMF8Q9P0V8 285 aa17.37■□□□□ 0.37
CTDSP1-213ENST00000496785 ZNF232Q9UNY5 417 aa17.37■□□□□ 0.37
CTDSP1-213ENST00000496785 IFT52Q9Y366 437 aa17.37■□□□□ 0.37
CTDSP1-213ENST00000496785 USP9YO00507 2555 aaPredicted RBP17.37■□□□□ 0.37
CTDSP1-213ENST00000496785 SPTBN1Q01082 2364 aaKnown RBP17.36■□□□□ 0.37
CTDSP1-213ENST00000496785 TNFSF12-TNFSF13A0A0A6YY99 330 aa17.36■□□□□ 0.37
CTDSP1-213ENST00000496785 A0A0G2JNJ9 132 aa17.36■□□□□ 0.37
CTDSP1-213ENST00000496785 CENPVL1A0A0U1RR11 272 aa17.36■□□□□ 0.37
CTDSP1-213ENST00000496785 DVL2O14641 736 aa17.36■□□□□ 0.37
CTDSP1-213ENST00000496785 OIP5O43482 229 aa17.36■□□□□ 0.37
CTDSP1-213ENST00000496785 DNAJA2O60884 412 aa17.36■□□□□ 0.37
CTDSP1-213ENST00000496785 NPPAP01160 153 aa17.36■□□□□ 0.37
CTDSP1-213ENST00000496785 THBS1P07996 1170 aa17.36■□□□□ 0.37
CTDSP1-213ENST00000496785 FCGR2AP12318 317 aa17.36■□□□□ 0.37
CTDSP1-213ENST00000496785 PRKCAP17252 672 aa17.36■□□□□ 0.37
CTDSP1-213ENST00000496785 QPRTQ15274 297 aa17.36■□□□□ 0.37
CTDSP1-213ENST00000496785 RUNDC3AQ59EK9 446 aa17.36■□□□□ 0.37
CTDSP1-213ENST00000496785 SLC25A53Q5H9E4 307 aa17.36■□□□□ 0.37
CTDSP1-213ENST00000496785 OR2A2Q6IF42 318 aa17.36■□□□□ 0.37
CTDSP1-213ENST00000496785 DLEU7Q6UYE1 221 aa17.36■□□□□ 0.37
CTDSP1-213ENST00000496785 ESPNLQ6ZVH7 1005 aa17.36■□□□□ 0.37
CTDSP1-213ENST00000496785 P4HA3Q7Z4N8 544 aa17.36■□□□□ 0.37
CTDSP1-213ENST00000496785 CPLX4Q7Z7G2 160 aa17.36■□□□□ 0.37
CTDSP1-213ENST00000496785 KRT73Q86Y46 540 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms