RNA–Protein interactions for RNA: ENST00000494748.1

SDF4-207, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 3,516 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-207ENST00000494748 AGERQ15109 404 aa14.27□□□□□ -0.13
SDF4-207ENST00000494748 PRPF38BQ5VTL8 546 aaKnown RBP14.27□□□□□ -0.13
SDF4-207ENST00000494748 OVCH2Q7RTZ1 564 aa14.27□□□□□ -0.13
SDF4-207ENST00000494748 RFLNBQ8N5W9 214 aa14.27□□□□□ -0.13
SDF4-207ENST00000494748 OR6M1Q8NGM8 313 aa14.27□□□□□ -0.13
SDF4-207ENST00000494748 RIT1Q92963 219 aa14.27□□□□□ -0.13
SDF4-207ENST00000494748 GIMAP5Q96F15 307 aa14.27□□□□□ -0.13
SDF4-207ENST00000494748 SFXN2Q96NB2 322 aa14.27□□□□□ -0.13
SDF4-207ENST00000494748 MS4A7Q9GZW8 240 aaPredicted RBP14.27□□□□□ -0.13
SDF4-207ENST00000494748 FN3KQ9H479 309 aa14.27□□□□□ -0.13
SDF4-207ENST00000494748 ADGRL4Q9HBW9 690 aa14.27□□□□□ -0.13
SDF4-207ENST00000494748 CAMK2AQ9UQM7 478 aa14.27□□□□□ -0.13
SDF4-207ENST00000494748 PRKAB1Q9Y478 270 aa14.27□□□□□ -0.13
SDF4-207ENST00000494748 PCDHGA9Q9Y5G4 932 aaKnown RBP14.27□□□□□ -0.13
SDF4-207ENST00000494748 DAPL1A0PJW8 107 aa14.26□□□□□ -0.13
SDF4-207ENST00000494748 LRRN3E7EW58 273 aa14.26□□□□□ -0.13
SDF4-207ENST00000494748 TOR1AO14656 332 aa14.26□□□□□ -0.13
SDF4-207ENST00000494748 TSPAN9O75954 239 aa14.26□□□□□ -0.13
SDF4-207ENST00000494748 RAB3BP20337 219 aa14.26□□□□□ -0.13
SDF4-207ENST00000494748 RECQLP46063 649 aaPredicted RBP14.26□□□□□ -0.13
SDF4-207ENST00000494748 BTN1A1Q13410 526 aa14.26□□□□□ -0.13
SDF4-207ENST00000494748 ACSM3Q53FZ2 586 aa14.26□□□□□ -0.13
SDF4-207ENST00000494748 GARNL3Q5VVW2 1013 aa14.26□□□□□ -0.13
SDF4-207ENST00000494748 CDC73Q6P1J9 531 aa14.26□□□□□ -0.13
SDF4-207ENST00000494748 ARSKQ6UWY0 536 aa14.26□□□□□ -0.13
SDF4-207ENST00000494748 ASPGQ86U10 573 aa14.26□□□□□ -0.13
SDF4-207ENST00000494748 ST8SIA4Q92187 359 aa14.26□□□□□ -0.13
SDF4-207ENST00000494748 RAD51AP1Q96B01 352 aa14.26□□□□□ -0.13
SDF4-207ENST00000494748 C4orf36Q96KX1 117 aa14.26□□□□□ -0.13
SDF4-207ENST00000494748 DMRTA2Q96SC8 542 aa14.26□□□□□ -0.13
SDF4-207ENST00000494748 ACTR6Q9GZN1 396 aa14.26□□□□□ -0.13
SDF4-207ENST00000494748 LRRN3Q9H3W5 708 aa14.26□□□□□ -0.13
SDF4-207ENST00000494748 TICRRQ7Z2Z1 1910 aa14.26□□□□□ -0.13
SDF4-207ENST00000494748 A0A1W2PR48 441 aa14.26□□□□□ -0.13
SDF4-207ENST00000494748 SLC22A23A1A5C7 686 aa14.26□□□□□ -0.13
SDF4-207ENST00000494748 A8MXK9 166 aa14.26□□□□□ -0.13
SDF4-207ENST00000494748 NMBP08949 121 aa14.26□□□□□ -0.13
SDF4-207ENST00000494748 HOXD10P28358 340 aa14.26□□□□□ -0.13
SDF4-207ENST00000494748 PRKAR1BP31321 381 aa14.26□□□□□ -0.13
SDF4-207ENST00000494748 GDNFP39905 211 aa14.26□□□□□ -0.13
SDF4-207ENST00000494748 OR12D2P58182 307 aa14.26□□□□□ -0.13
SDF4-207ENST00000494748 SNTB2Q13425 540 aaKnown RBP14.26□□□□□ -0.13
SDF4-207ENST00000494748 TRAM1Q15629 374 aa14.26□□□□□ -0.13
SDF4-207ENST00000494748 SLC22A10Q63ZE4 541 aa14.26□□□□□ -0.13
SDF4-207ENST00000494748 ERMAPQ96PL5 475 aaPredicted RBP14.26□□□□□ -0.13
SDF4-207ENST00000494748 OR52D1Q9H346 318 aa14.26□□□□□ -0.13
SDF4-207ENST00000494748 H2AFY2Q9P0M6 372 aaPredicted RBP14.26□□□□□ -0.13
SDF4-207ENST00000494748 CES1P1Q9UKY3 287 aa14.26□□□□□ -0.13
SDF4-207ENST00000494748 EML5Q05BV3 1969 aa14.26□□□□□ -0.13
SDF4-207ENST00000494748 TRAV1-2A0A0B4J238 106 aa14.25□□□□□ -0.13
SDF4-207ENST00000494748 LRIT2A6NDA9 550 aa14.25□□□□□ -0.13
SDF4-207ENST00000494748 MAKP20794 623 aa14.25□□□□□ -0.13
SDF4-207ENST00000494748 ACVR1BP36896 505 aa14.25□□□□□ -0.13
SDF4-207ENST00000494748 ZNF273Q14593 569 aa14.25□□□□□ -0.13
SDF4-207ENST00000494748 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.25□□□□□ -0.13
SDF4-207ENST00000494748 IZUMO1Q8IYV9 350 aa14.25□□□□□ -0.13
SDF4-207ENST00000494748 CCDC116Q8IYX3 515 aa14.25□□□□□ -0.13
SDF4-207ENST00000494748 OR10H4Q8NGA5 316 aa14.25□□□□□ -0.13
SDF4-207ENST00000494748 PLEKHA1Q9HB21 404 aa14.25□□□□□ -0.13
SDF4-207ENST00000494748 HCN3Q9P1Z3 774 aa14.25□□□□□ -0.13
SDF4-207ENST00000494748 SLC23A2Q9UGH3 650 aa14.25□□□□□ -0.13
SDF4-207ENST00000494748 SLC7A7Q9UM01 511 aa14.25□□□□□ -0.13
SDF4-207ENST00000494748 NOTCH4Q99466 2003 aa14.25□□□□□ -0.13
SDF4-207ENST00000494748 CDHR4A6H8M9 788 aa14.25□□□□□ -0.13
SDF4-207ENST00000494748 LYPD3O95274 346 aa14.25□□□□□ -0.13
SDF4-207ENST00000494748 MT-ND5P03915 603 aa14.25□□□□□ -0.13
SDF4-207ENST00000494748 ASGR2P07307 311 aa14.25□□□□□ -0.13
SDF4-207ENST00000494748 SAGP10523 405 aaPredicted RBP14.25□□□□□ -0.13
SDF4-207ENST00000494748 VEGFCP49767 419 aa14.25□□□□□ -0.13
SDF4-207ENST00000494748 ZNF136P52737 540 aa14.25□□□□□ -0.13
SDF4-207ENST00000494748 PDX1P52945 283 aa14.25□□□□□ -0.13
SDF4-207ENST00000494748 RAB14P61106 215 aa14.25□□□□□ -0.13
SDF4-207ENST00000494748 TSPAN5P62079 268 aa14.25□□□□□ -0.13
SDF4-207ENST00000494748 RPS11P62280 158 aaKnown RBP eCLIP14.25□□□□□ -0.134e-6■■■□□ 16
SDF4-207ENST00000494748 CSNK1G2P78368 415 aa14.25□□□□□ -0.13
SDF4-207ENST00000494748 RRM2BQ7LG56 351 aa14.25□□□□□ -0.13
SDF4-207ENST00000494748 DCUN1D3Q8IWE4 304 aa14.25□□□□□ -0.13
SDF4-207ENST00000494748 LINC01555Q8NAE3 123 aa14.25□□□□□ -0.13
SDF4-207ENST00000494748 PEX11GQ96HA9 241 aa14.25□□□□□ -0.13
SDF4-207ENST00000494748 MCHR1Q99705 422 aa14.25□□□□□ -0.13
SDF4-207ENST00000494748 C1QTNF2Q9BXJ5 285 aa14.25□□□□□ -0.13
SDF4-207ENST00000494748 CNTRLQ7Z7A1 2325 aa14.25□□□□□ -0.13
SDF4-207ENST00000494748 CENPVL1A0A0U1RR11 272 aa14.25□□□□□ -0.13
SDF4-207ENST00000494748 OR2M5A3KFT3 312 aa14.25□□□□□ -0.13
SDF4-207ENST00000494748 ANTXRLA6NF34 631 aa14.25□□□□□ -0.13
SDF4-207ENST00000494748 NDUFA2O43678 99 aa14.25□□□□□ -0.13
SDF4-207ENST00000494748 OR5F1O95221 314 aa14.25□□□□□ -0.13
SDF4-207ENST00000494748 CLUP10909 449 aa14.25□□□□□ -0.13
SDF4-207ENST00000494748 TYRP14679 529 aa14.25□□□□□ -0.13
SDF4-207ENST00000494748 NOS3P29474 1203 aa14.25□□□□□ -0.13
SDF4-207ENST00000494748 CCR2P41597 374 aa14.25□□□□□ -0.13
SDF4-207ENST00000494748 CCR9P51686 369 aa14.25□□□□□ -0.13
SDF4-207ENST00000494748 PITPNAQ00169 270 aa14.25□□□□□ -0.13
SDF4-207ENST00000494748 FAM71CQ8NEG0 241 aa14.25□□□□□ -0.13
SDF4-207ENST00000494748 SP7Q8TDD2 431 aaPredicted RBP14.25□□□□□ -0.13
SDF4-207ENST00000494748 GCDHQ92947 438 aaPredicted RBP14.25□□□□□ -0.13
SDF4-207ENST00000494748 GFI1Q99684 422 aa14.25□□□□□ -0.13
SDF4-207ENST00000494748 WDR26Q9H7D7 661 aa14.25□□□□□ -0.13
SDF4-207ENST00000494748 HRASLSQ9HDD0 168 aa14.25□□□□□ -0.13
SDF4-207ENST00000494748 HMX1Q9NP08 348 aaPredicted RBP14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms