RNA–Protein interactions for RNA: ENST00000494667.5

PRKD3-210, Transcript of protein kinase D3, humanhuman

TSL 1 (best)

Gene PRKD3, Length 4,326 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-210ENST00000494667 CNTNAP3BQ96NU0 1288 aa4.47□□□□□ -1.69
PRKD3-210ENST00000494667 PFDN5Q99471 154 aa4.47□□□□□ -1.69
PRKD3-210ENST00000494667 MFFQ9GZY8 342 aa4.47□□□□□ -1.69
PRKD3-210ENST00000494667 AP5M1Q9H0R1 490 aa4.47□□□□□ -1.69
PRKD3-210ENST00000494667 SFXN1Q9H9B4 322 aa4.47□□□□□ -1.69
PRKD3-210ENST00000494667 DHCR7Q9UBM7 475 aaKnown RBP4.47□□□□□ -1.69
PRKD3-210ENST00000494667 FBXL4Q9UKA2 621 aa4.47□□□□□ -1.69
PRKD3-210ENST00000494667 GJD2Q9UKL4 321 aa4.47□□□□□ -1.69
PRKD3-210ENST00000494667 FAM50BQ9Y247 325 aa4.47□□□□□ -1.69
PRKD3-210ENST00000494667 SNX10Q9Y5X0 201 aa4.47□□□□□ -1.69
PRKD3-210ENST00000494667 MTCH2Q9Y6C9 303 aa4.47□□□□□ -1.69
PRKD3-210ENST00000494667 PLXNB3Q9ULL4 1909 aa4.47□□□□□ -1.69
PRKD3-210ENST00000494667 TRBV23-1A0A0A0MS06 115 aa4.47□□□□□ -1.69
PRKD3-210ENST00000494667 TRBC2A0A5B9 178 aa4.47□□□□□ -1.69
PRKD3-210ENST00000494667 IDSB3KWA1 339 aa4.47□□□□□ -1.69
PRKD3-210ENST00000494667 H7C417 338 aa4.47□□□□□ -1.69
PRKD3-210ENST00000494667 J3KTA2 159 aa4.47□□□□□ -1.69
PRKD3-210ENST00000494667 RFXAPO00287 272 aa4.47□□□□□ -1.69
PRKD3-210ENST00000494667 MFNGO00587 321 aa4.47□□□□□ -1.69
PRKD3-210ENST00000494667 PRAMEF11O60813 436 aa4.47□□□□□ -1.69
PRKD3-210ENST00000494667 CLDN11O75508 207 aa4.47□□□□□ -1.69
PRKD3-210ENST00000494667 UBXN7O94888 489 aa4.47□□□□□ -1.69
PRKD3-210ENST00000494667 APBB3O95704 486 aa4.47□□□□□ -1.69
PRKD3-210ENST00000494667 CXCL14O95715 111 aa4.47□□□□□ -1.69
PRKD3-210ENST00000494667 B3GALT4O96024 378 aa4.47□□□□□ -1.69
PRKD3-210ENST00000494667 TYMPP19971 482 aa4.47□□□□□ -1.69
PRKD3-210ENST00000494667 DGKAP23743 735 aa4.47□□□□□ -1.69
PRKD3-210ENST00000494667 BDKRB2P30411 391 aa4.47□□□□□ -1.69
PRKD3-210ENST00000494667 UCP2P55851 309 aa4.47□□□□□ -1.69
PRKD3-210ENST00000494667 RAB2AP61019 212 aa4.47□□□□□ -1.69
PRKD3-210ENST00000494667 CDK6Q00534 326 aa4.47□□□□□ -1.69
PRKD3-210ENST00000494667 SSX2Q16385 188 aa4.47□□□□□ -1.69
PRKD3-210ENST00000494667 SPDYE7PQ495Y7 208 aa4.47□□□□□ -1.69
PRKD3-210ENST00000494667 LYPLAL1Q5VWZ2 237 aa4.47□□□□□ -1.69
PRKD3-210ENST00000494667 TRIM40Q6P9F5 258 aa4.47□□□□□ -1.69
PRKD3-210ENST00000494667 UNQ9370/PRO34162Q6UXP9 181 aa4.47□□□□□ -1.69
PRKD3-210ENST00000494667 AMIGO3Q86WK7 504 aa4.47□□□□□ -1.69
PRKD3-210ENST00000494667 OR6N1Q8NGY5 312 aa4.47□□□□□ -1.69
PRKD3-210ENST00000494667 BRIX1Q8TDN6 353 aaKnown RBP4.47□□□□□ -1.69
PRKD3-210ENST00000494667 CXorf40AQ8TE69 158 aa4.47□□□□□ -1.69
PRKD3-210ENST00000494667 PMM1Q92871 262 aa4.47□□□□□ -1.69
PRKD3-210ENST00000494667 APIPQ96GX9 242 aa4.47□□□□□ -1.69
PRKD3-210ENST00000494667 MRPL37Q9BZE1 423 aaKnown RBP4.47□□□□□ -1.69
PRKD3-210ENST00000494667 TLNRD1Q9H1K6 362 aa4.47□□□□□ -1.69
PRKD3-210ENST00000494667 ATXN3LQ9H3M9 355 aa4.47□□□□□ -1.69
PRKD3-210ENST00000494667 NCOR1P1Q9H4R4 102 aa4.47□□□□□ -1.69
PRKD3-210ENST00000494667 UQCC1Q9NVA1 299 aa4.47□□□□□ -1.69
PRKD3-210ENST00000494667 PARPBPQ9NWS1 579 aa4.47□□□□□ -1.69
PRKD3-210ENST00000494667 KLHL9Q9P2J3 617 aa4.47□□□□□ -1.69
PRKD3-210ENST00000494667 CA14Q9ULX7 337 aa4.47□□□□□ -1.69
PRKD3-210ENST00000494667 ANKRD12Q6UB98 2062 aa4.47□□□□□ -1.69
PRKD3-210ENST00000494667 A0A1B0GV90 55 aa4.47□□□□□ -1.69
PRKD3-210ENST00000494667 NCF1BA6NI72 391 aaPredicted RBP4.47□□□□□ -1.69
PRKD3-210ENST00000494667 NCF1CA8MVU1 366 aaPredicted RBP4.47□□□□□ -1.69
PRKD3-210ENST00000494667 MID1O15344 667 aa4.47□□□□□ -1.69
PRKD3-210ENST00000494667 TOXO94900 526 aa4.47□□□□□ -1.69
PRKD3-210ENST00000494667 CD74P04233 296 aa4.47□□□□□ -1.69
PRKD3-210ENST00000494667 CRHP06850 196 aa4.47□□□□□ -1.69
PRKD3-210ENST00000494667 H1F0P07305 194 aaKnown RBP4.47□□□□□ -1.69
PRKD3-210ENST00000494667 CHRM5P08912 532 aaPredicted RBP4.47□□□□□ -1.69
PRKD3-210ENST00000494667 C1GALT1C1LP0DN25 315 aa4.47□□□□□ -1.69
PRKD3-210ENST00000494667 CR2P20023 1033 aa4.47□□□□□ -1.69
PRKD3-210ENST00000494667 PDHA2P29803 388 aa4.47□□□□□ -1.69
PRKD3-210ENST00000494667 CSF2RBP32927 897 aa4.47□□□□□ -1.69
PRKD3-210ENST00000494667 SOX18P35713 384 aa4.47□□□□□ -1.69
PRKD3-210ENST00000494667 CDX1P47902 265 aaPredicted RBP4.47□□□□□ -1.69
PRKD3-210ENST00000494667 PNLIPRP1P54315 467 aa4.47□□□□□ -1.69
PRKD3-210ENST00000494667 RAE1P78406 368 aaKnown RBP4.47□□□□□ -1.69
PRKD3-210ENST00000494667 SLC10A7Q0GE19 358 aa4.47□□□□□ -1.69
PRKD3-210ENST00000494667 FABP9Q0Z7S8 132 aa4.47□□□□□ -1.69
PRKD3-210ENST00000494667 PJVKQ0ZLH3 352 aa4.47□□□□□ -1.69
PRKD3-210ENST00000494667 TCTN3Q6NUS6 607 aa4.47□□□□□ -1.69
PRKD3-210ENST00000494667 TMEM88Q6PEY1 159 aa4.47□□□□□ -1.69
PRKD3-210ENST00000494667 ZNF621Q6ZSS3 439 aa4.47□□□□□ -1.69
PRKD3-210ENST00000494667 NDUFAF7Q7L592 441 aa4.47□□□□□ -1.69
PRKD3-210ENST00000494667 CIR1Q86X95 450 aaPredicted RBP4.47□□□□□ -1.69
PRKD3-210ENST00000494667 DCUN1D3Q8IWE4 304 aa4.47□□□□□ -1.69
PRKD3-210ENST00000494667 MEIOBQ8N635 442 aa4.47□□□□□ -1.69
PRKD3-210ENST00000494667 OR4A4PQ8NGN8 299 aa4.47□□□□□ -1.69
PRKD3-210ENST00000494667 BBS10Q8TAM1 723 aa4.47□□□□□ -1.69
PRKD3-210ENST00000494667 SAMD8Q96LT4 415 aa4.47□□□□□ -1.69
PRKD3-210ENST00000494667 PARK7Q99497 189 aaKnown RBP4.47□□□□□ -1.69
PRKD3-210ENST00000494667 COPS8Q99627 209 aa4.47□□□□□ -1.69
PRKD3-210ENST00000494667 NRIP2Q9BQI9 281 aa4.47□□□□□ -1.69
PRKD3-210ENST00000494667 ZNF559Q9BR84 538 aa4.47□□□□□ -1.69
PRKD3-210ENST00000494667 TRMT61BQ9BVS5 477 aaKnown RBP4.47□□□□□ -1.69
PRKD3-210ENST00000494667 TOLLIPQ9H0E2 274 aa4.47□□□□□ -1.69
PRKD3-210ENST00000494667 LMAN1LQ9HAT1 526 aa4.47□□□□□ -1.69
PRKD3-210ENST00000494667 TMEM27Q9HBJ8 222 aa4.47□□□□□ -1.69
PRKD3-210ENST00000494667 NT5MQ9NPB1 228 aa4.47□□□□□ -1.69
PRKD3-210ENST00000494667 ZNF107Q9UII5 783 aaPredicted RBP4.47□□□□□ -1.69
PRKD3-210ENST00000494667 ST3GAL5Q9UNP4 418 aa4.47□□□□□ -1.69
PRKD3-210ENST00000494667 TMED3Q9Y3Q3 217 aa4.47□□□□□ -1.69
PRKD3-210ENST00000494667 UBE2QL1A1L167 161 aa4.46□□□□□ -1.69
PRKD3-210ENST00000494667 KLF4O43474 513 aa4.46□□□□□ -1.69
PRKD3-210ENST00000494667 STK16O75716 305 aa4.46□□□□□ -1.69
PRKD3-210ENST00000494667 GATBO75879 557 aaKnown RBP4.46□□□□□ -1.69
PRKD3-210ENST00000494667 CD3GP09693 182 aa4.46□□□□□ -1.69
PRKD3-210ENST00000494667 RAB40ALP0C0E4 278 aa4.46□□□□□ -1.69
PRKD3-210ENST00000494667 USP17L7P0C7H9 530 aa4.46□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms