RNA–Protein interactions for RNA: ENST00000494464.5

ERCC3-209, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 1,367 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-209ENST00000494464 RFX3P48380 749 aa11.94□□□□□ -0.5
ERCC3-209ENST00000494464 ZNF136P52737 540 aa11.94□□□□□ -0.5
ERCC3-209ENST00000494464 DGKQP52824 942 aa11.94□□□□□ -0.5
ERCC3-209ENST00000494464 PRKAG1P54619 331 aa11.94□□□□□ -0.5
ERCC3-209ENST00000494464 CLDN18P56856 261 aa11.94□□□□□ -0.5
ERCC3-209ENST00000494464 SESN3P58005 492 aa11.94□□□□□ -0.5
ERCC3-209ENST00000494464 B3GALT5-AS1P59052 145 aa11.94□□□□□ -0.5
ERCC3-209ENST00000494464 DUSP5Q16690 384 aa11.94□□□□□ -0.5
ERCC3-209ENST00000494464 GRAMD1BQ3KR37 738 aa11.94□□□□□ -0.5
ERCC3-209ENST00000494464 FBXL19-AS1Q494R0 122 aa11.94□□□□□ -0.5
ERCC3-209ENST00000494464 LRIF1Q5T3J3 769 aa11.94□□□□□ -0.5
ERCC3-209ENST00000494464 NANOGP8Q6NSW7 305 aa11.94□□□□□ -0.5
ERCC3-209ENST00000494464 POMZP3Q6PJE2 187 aa11.94□□□□□ -0.5
ERCC3-209ENST00000494464 AQP12AQ8IXF9 295 aa11.94□□□□□ -0.5
ERCC3-209ENST00000494464 KRTCAP2Q8N6L1 136 aa11.94□□□□□ -0.5
ERCC3-209ENST00000494464 FAM156AQ8NDB6 213 aa11.94□□□□□ -0.5
ERCC3-209ENST00000494464 HIPK4Q8NE63 616 aa11.94□□□□□ -0.5
ERCC3-209ENST00000494464 OR56A1Q8NGH5 318 aa11.94□□□□□ -0.5
ERCC3-209ENST00000494464 FAM110BQ8TC76 370 aa11.94□□□□□ -0.5
ERCC3-209ENST00000494464 SFXN5Q8TD22 340 aa11.94□□□□□ -0.5
ERCC3-209ENST00000494464 GTF2H4Q92759 462 aa11.94□□□□□ -0.5
ERCC3-209ENST00000494464 RSRC1Q96IZ7 334 aaKnown RBP11.94□□□□□ -0.5
ERCC3-209ENST00000494464 LURAP1Q96LR2 239 aa11.94□□□□□ -0.5
ERCC3-209ENST00000494464 ZFP3Q96NJ6 502 aa11.94□□□□□ -0.5
ERCC3-209ENST00000494464 TRIB1Q96RU8 372 aa11.94□□□□□ -0.5
ERCC3-209ENST00000494464 STACQ99469 402 aa11.94□□□□□ -0.5
ERCC3-209ENST00000494464 TUBA1CQ9BQE3 449 aa11.94□□□□□ -0.5
ERCC3-209ENST00000494464 TBL1XR1Q9BZK7 514 aa11.94□□□□□ -0.5
ERCC3-209ENST00000494464 RTN4RQ9BZR6 473 aa11.94□□□□□ -0.5
ERCC3-209ENST00000494464 VCX3BQ9H321 246 aa11.94□□□□□ -0.5
ERCC3-209ENST00000494464 DSN1Q9H410 356 aa11.94□□□□□ -0.5
ERCC3-209ENST00000494464 ALG2Q9H553 416 aa11.94□□□□□ -0.5
ERCC3-209ENST00000494464 PTGES2Q9H7Z7 377 aa11.94□□□□□ -0.5
ERCC3-209ENST00000494464 RMND5AQ9H871 391 aa11.94□□□□□ -0.5
ERCC3-209ENST00000494464 NANOGQ9H9S0 305 aa11.94□□□□□ -0.5
ERCC3-209ENST00000494464 DUSP22Q9NRW4 184 aa11.94□□□□□ -0.5
ERCC3-209ENST00000494464 GIN1Q9NXP7 522 aa11.94□□□□□ -0.5
ERCC3-209ENST00000494464 CLCF1Q9UBD9 225 aa11.94□□□□□ -0.5
ERCC3-209ENST00000494464 LRRC42Q9Y546 428 aa11.94□□□□□ -0.5
ERCC3-209ENST00000494464 A0A096LPI6 279 aa11.93□□□□□ -0.5
ERCC3-209ENST00000494464 TRBV5-3A0A0A0MS03 114 aa11.93□□□□□ -0.5
ERCC3-209ENST00000494464 ALG1L2C9J202 215 aa11.93□□□□□ -0.5
ERCC3-209ENST00000494464 LINC01387J3KSC0 135 aa11.93□□□□□ -0.5
ERCC3-209ENST00000494464 KCNK2O95069 426 aa11.93□□□□□ -0.5
ERCC3-209ENST00000494464 ANGPTL1O95841 491 aa11.93□□□□□ -0.5
ERCC3-209ENST00000494464 HMGN2P05204 90 aaKnown RBP11.93□□□□□ -0.5
ERCC3-209ENST00000494464 ALOX5P09917 674 aa11.93□□□□□ -0.5
ERCC3-209ENST00000494464 TCN1P20061 433 aaPredicted RBP11.93□□□□□ -0.5
ERCC3-209ENST00000494464 BMP5P22003 454 aa11.93□□□□□ -0.5
ERCC3-209ENST00000494464 S100A3P33764 101 aa11.93□□□□□ -0.5
ERCC3-209ENST00000494464 PEX19P40855 299 aa11.93□□□□□ -0.5
ERCC3-209ENST00000494464 GSK3BP49841 420 aa11.93□□□□□ -0.5
ERCC3-209ENST00000494464 ASCL1P50553 236 aa11.93□□□□□ -0.5
ERCC3-209ENST00000494464 WNT3P56703 355 aa11.93□□□□□ -0.5
ERCC3-209ENST00000494464 C17orf67Q0P5P2 114 aa11.93□□□□□ -0.5
ERCC3-209ENST00000494464 BCL2A1Q16548 175 aa11.93□□□□□ -0.5
ERCC3-209ENST00000494464 CDC73Q6P1J9 531 aa11.93□□□□□ -0.5
ERCC3-209ENST00000494464 SPATA24Q86W54 205 aa11.93□□□□□ -0.5
ERCC3-209ENST00000494464 DHFR2Q86XF0 187 aa11.93□□□□□ -0.5
ERCC3-209ENST00000494464 PQLC1Q8N2U9 271 aa11.93□□□□□ -0.5
ERCC3-209ENST00000494464 COX18Q8N8Q8 333 aa11.93□□□□□ -0.5
ERCC3-209ENST00000494464 FBXO30Q8TB52 745 aa11.93□□□□□ -0.5
ERCC3-209ENST00000494464 MOAP1Q96BY2 351 aa11.93□□□□□ -0.5
ERCC3-209ENST00000494464 C1GALT1C1Q96EU7 318 aa11.93□□□□□ -0.5
ERCC3-209ENST00000494464 SH3GL1Q99961 368 aa11.93□□□□□ -0.5
ERCC3-209ENST00000494464 G6PC3Q9BUM1 346 aa11.93□□□□□ -0.5
ERCC3-209ENST00000494464 DUSP26Q9BV47 211 aa11.93□□□□□ -0.5
ERCC3-209ENST00000494464 PCDHAC1Q9H158 963 aa11.93□□□□□ -0.5
ERCC3-209ENST00000494464 ACTR3BQ9P1U1 418 aa11.93□□□□□ -0.5
ERCC3-209ENST00000494464 KCNN3Q9UGI6 736 aa11.93□□□□□ -0.5
ERCC3-209ENST00000494464 SNX13Q9Y5W8 968 aa11.93□□□□□ -0.5
ERCC3-209ENST00000494464 MED12Q93074 2177 aa11.93□□□□□ -0.5
ERCC3-209ENST00000494464 HCRTR2O43614 444 aa11.92□□□□□ -0.5
ERCC3-209ENST00000494464 SOX30O94993 753 aa11.92□□□□□ -0.5
ERCC3-209ENST00000494464 OXSR1O95747 527 aaPredicted RBP11.92□□□□□ -0.5
ERCC3-209ENST00000494464 BAG2O95816 211 aa11.92□□□□□ -0.5
ERCC3-209ENST00000494464 C6orf47O95873 294 aa11.92□□□□□ -0.5
ERCC3-209ENST00000494464 IL18BPO95998 194 aa11.92□□□□□ -0.5
ERCC3-209ENST00000494464 PEPDP12955 493 aa11.92□□□□□ -0.5
ERCC3-209ENST00000494464 HOXB9P17482 250 aaPredicted RBP11.92□□□□□ -0.5
ERCC3-209ENST00000494464 TBXA2RP21731 343 aa11.92□□□□□ -0.5
ERCC3-209ENST00000494464 CTSSP25774 331 aa11.92□□□□□ -0.5
ERCC3-209ENST00000494464 MSX2P35548 267 aaPredicted RBP11.92□□□□□ -0.5
ERCC3-209ENST00000494464 CCT3P49368 545 aaKnown RBP11.92□□□□□ -0.5
ERCC3-209ENST00000494464 ERFP50548 548 aa11.92□□□□□ -0.5
ERCC3-209ENST00000494464 POU6F2P78424 691 aaPredicted RBP11.92□□□□□ -0.5
ERCC3-209ENST00000494464 TLE4Q04727 773 aa11.92□□□□□ -0.5
ERCC3-209ENST00000494464 LIPEQ05469 1076 aa11.92□□□□□ -0.5
ERCC3-209ENST00000494464 LASP1Q14847 261 aaKnown RBP11.92□□□□□ -0.5
ERCC3-209ENST00000494464 GLYR1Q49A26 553 aaPredicted RBP11.92□□□□□ -0.5
ERCC3-209ENST00000494464 RABL3Q5HYI8 236 aa11.92□□□□□ -0.5
ERCC3-209ENST00000494464 SWT1Q5T5J6 900 aaKnown RBP11.92□□□□□ -0.5
ERCC3-209ENST00000494464 RAET1LQ5VY80 246 aa11.92□□□□□ -0.5
ERCC3-209ENST00000494464 APOOLQ6UXV4 268 aa11.92□□□□□ -0.5
ERCC3-209ENST00000494464 MARCH3Q86UD3 253 aa11.92□□□□□ -0.5
ERCC3-209ENST00000494464 C9orf106Q8NAJ2 232 aa11.92□□□□□ -0.5
ERCC3-209ENST00000494464 OR8J2Q8NGG1 315 aa11.92□□□□□ -0.5
ERCC3-209ENST00000494464 GOT1L1Q8NHS2 421 aaPredicted RBP11.92□□□□□ -0.5
ERCC3-209ENST00000494464 DUSP19Q8WTR2 217 aa11.92□□□□□ -0.5
ERCC3-209ENST00000494464 LRRC46Q96FV0 321 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms