RNA–Protein interactions for RNA: ENST00000493792.1

TRAPPC12-222, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-222ENST00000493792 NPIPB9F8W1W9 429 aa9.4□□□□□ -0.9
TRAPPC12-222ENST00000493792 EIF4E2O60573 245 aaKnown RBP9.4□□□□□ -0.9
TRAPPC12-222ENST00000493792 UGT2B17O75795 530 aa9.4□□□□□ -0.9
TRAPPC12-222ENST00000493792 EPPINO95925 133 aa9.4□□□□□ -0.9
TRAPPC12-222ENST00000493792 IL2RAP01589 272 aa9.4□□□□□ -0.9
TRAPPC12-222ENST00000493792 OPN1LWP04000 364 aa9.4□□□□□ -0.9
TRAPPC12-222ENST00000493792 CHRM4P08173 479 aa9.4□□□□□ -0.9
TRAPPC12-222ENST00000493792 CPN1P15169 458 aa9.4□□□□□ -0.9
TRAPPC12-222ENST00000493792 CD1EP15812 388 aa9.4□□□□□ -0.9
TRAPPC12-222ENST00000493792 ME2P23368 584 aa9.4□□□□□ -0.9
TRAPPC12-222ENST00000493792 LHX2P50458 406 aa9.4□□□□□ -0.9
TRAPPC12-222ENST00000493792 ZNF141Q15928 474 aa9.4□□□□□ -0.9
TRAPPC12-222ENST00000493792 SGCBQ16585 318 aa9.4□□□□□ -0.9
TRAPPC12-222ENST00000493792 GLYR1Q49A26 553 aaPredicted RBP9.4□□□□□ -0.9
TRAPPC12-222ENST00000493792 PAGE3Q5JUK9 113 aa9.4□□□□□ -0.9
TRAPPC12-222ENST00000493792 METTL21CQ5VZV1 264 aa9.4□□□□□ -0.9
TRAPPC12-222ENST00000493792 TYW3Q6IPR3 259 aaKnown RBP9.4□□□□□ -0.9
TRAPPC12-222ENST00000493792 CGB2Q6NT52 195 aa9.4□□□□□ -0.9
TRAPPC12-222ENST00000493792 PLXDC2Q6UX71 529 aa9.4□□□□□ -0.9
TRAPPC12-222ENST00000493792 FRRS1Q6ZNA5 592 aa9.4□□□□□ -0.9
TRAPPC12-222ENST00000493792 EIF3MQ7L2H7 374 aaKnown RBP9.4□□□□□ -0.9
TRAPPC12-222ENST00000493792 GRAMD2AQ8IUY3 354 aa9.4□□□□□ -0.9
TRAPPC12-222ENST00000493792 ATP6V1C2Q8NEY4 427 aa9.4□□□□□ -0.9
TRAPPC12-222ENST00000493792 ZBTB8AQ96BR9 441 aa9.4□□□□□ -0.9
TRAPPC12-222ENST00000493792 ARSGQ96EG1 525 aa9.4□□□□□ -0.9
TRAPPC12-222ENST00000493792 RNF145Q96MT1 663 aa9.4□□□□□ -0.9
TRAPPC12-222ENST00000493792 TRNT1Q96Q11 434 aaKnown RBP9.4□□□□□ -0.9
TRAPPC12-222ENST00000493792 TREX2Q9BQ50 279 aaPredicted RBP9.4□□□□□ -0.9
TRAPPC12-222ENST00000493792 KLHDC3Q9BQ90 382 aa9.4□□□□□ -0.9
TRAPPC12-222ENST00000493792 UCK2Q9BZX2 261 aa9.4□□□□□ -0.9
TRAPPC12-222ENST00000493792 FAM107BQ9H098 131 aa9.4□□□□□ -0.9
TRAPPC12-222ENST00000493792 ENKD1Q9H0I2 346 aa9.4□□□□□ -0.9
TRAPPC12-222ENST00000493792 CCDC134Q9H6E4 229 aa9.4□□□□□ -0.9
TRAPPC12-222ENST00000493792 TMEM185BQ9H7F4 350 aa9.4□□□□□ -0.9
TRAPPC12-222ENST00000493792 ST6GALNAC1Q9NSC7 600 aaPredicted RBP9.4□□□□□ -0.9
TRAPPC12-222ENST00000493792 KCNE5Q9UJ90 142 aa9.4□□□□□ -0.9
TRAPPC12-222ENST00000493792 NDUFAF1Q9Y375 327 aa9.4□□□□□ -0.9
TRAPPC12-222ENST00000493792 L3MBTL1Q9Y468 752 aa9.4□□□□□ -0.9
TRAPPC12-222ENST00000493792 PRRC2AP48634 2157 aaKnown RBP9.4□□□□□ -0.91
TRAPPC12-222ENST00000493792 MED12Q93074 2177 aa9.39□□□□□ -0.91
TRAPPC12-222ENST00000493792 A0A0G2JNJ9 132 aa9.39□□□□□ -0.91
TRAPPC12-222ENST00000493792 A0A1W2PP18 115 aa9.39□□□□□ -0.91
TRAPPC12-222ENST00000493792 PRAMEF27A3QJZ7 478 aa9.39□□□□□ -0.91
TRAPPC12-222ENST00000493792 NKX2-6A6NCS4 301 aa9.39□□□□□ -0.91
TRAPPC12-222ENST00000493792 HSPB2A8KAH6 182 aa9.39□□□□□ -0.91
TRAPPC12-222ENST00000493792 EVPLLA8MZ36 301 aa9.39□□□□□ -0.91
TRAPPC12-222ENST00000493792 C5orf58C9J3I9 102 aa9.39□□□□□ -0.91
TRAPPC12-222ENST00000493792 H0YC42 278 aa9.39□□□□□ -0.91
TRAPPC12-222ENST00000493792 LINC01387J3KSC0 135 aa9.39□□□□□ -0.91
TRAPPC12-222ENST00000493792 DYNC1I1O14576 645 aa9.39□□□□□ -0.91
TRAPPC12-222ENST00000493792 EIF1AYO14602 144 aaKnown RBP9.39□□□□□ -0.91
TRAPPC12-222ENST00000493792 IL7RP16871 459 aa9.39□□□□□ -0.91
TRAPPC12-222ENST00000493792 ZNF708P17019 499 aa9.39□□□□□ -0.91
TRAPPC12-222ENST00000493792 BMP5P22003 454 aa9.39□□□□□ -0.91
TRAPPC12-222ENST00000493792 PPIBP23284 216 aaKnown RBP9.39□□□□□ -0.91
TRAPPC12-222ENST00000493792 RYKP34925 604 aa9.39□□□□□ -0.91
TRAPPC12-222ENST00000493792 ADH7P40394 386 aa9.39□□□□□ -0.91
TRAPPC12-222ENST00000493792 MAGEA8P43361 318 aa9.39□□□□□ -0.91
TRAPPC12-222ENST00000493792 AGFG1P52594 562 aaKnown RBP9.39□□□□□ -0.91
TRAPPC12-222ENST00000493792 CRISP3P54108 245 aa9.39□□□□□ -0.91
TRAPPC12-222ENST00000493792 TPD52P55327 224 aaPredicted RBP9.39□□□□□ -0.91
TRAPPC12-222ENST00000493792 SUMO3P55854 103 aaPredicted RBP9.39□□□□□ -0.91
TRAPPC12-222ENST00000493792 CLDN18P56856 261 aa9.39□□□□□ -0.91
TRAPPC12-222ENST00000493792 CLDN20P56880 219 aa9.39□□□□□ -0.91
TRAPPC12-222ENST00000493792 EEFSECP57772 596 aaKnown RBP9.39□□□□□ -0.91
TRAPPC12-222ENST00000493792 RPS3AP61247 264 aaKnown RBP9.39□□□□□ -0.91
TRAPPC12-222ENST00000493792 TLE4Q04727 773 aa9.39□□□□□ -0.91
TRAPPC12-222ENST00000493792 FOXF1Q12946 379 aa9.39□□□□□ -0.91
TRAPPC12-222ENST00000493792 CBFBQ13951 182 aa9.39□□□□□ -0.91
TRAPPC12-222ENST00000493792 NFYCQ13952 458 aa9.39□□□□□ -0.91
TRAPPC12-222ENST00000493792 GNA13Q14344 377 aa9.39□□□□□ -0.91
TRAPPC12-222ENST00000493792 RGNQ15493 299 aa9.39□□□□□ -0.91
TRAPPC12-222ENST00000493792 HSPB2Q16082 182 aa9.39□□□□□ -0.91
TRAPPC12-222ENST00000493792 MAPK14Q16539 360 aa9.39□□□□□ -0.91
TRAPPC12-222ENST00000493792 PLPPR5Q32ZL2 321 aa9.39□□□□□ -0.91
TRAPPC12-222ENST00000493792 MMEL1Q495T6 779 aa9.39□□□□□ -0.91
TRAPPC12-222ENST00000493792 RPS26P11Q5JNZ5 115 aaPredicted RBP9.39□□□□□ -0.91
TRAPPC12-222ENST00000493792 RIPPLY2Q5TAB7 128 aa9.39□□□□□ -0.91
TRAPPC12-222ENST00000493792 NSUN5P2Q63ZY6 315 aa9.39□□□□□ -0.91
TRAPPC12-222ENST00000493792 POMZP3Q6PJE2 187 aa9.39□□□□□ -0.91
TRAPPC12-222ENST00000493792 LRRC74BQ6ZQY2 392 aa9.39□□□□□ -0.91
TRAPPC12-222ENST00000493792 DHDDSQ86SQ9 333 aa9.39□□□□□ -0.91
TRAPPC12-222ENST00000493792 PEX5LQ8IYB4 626 aa9.39□□□□□ -0.91
TRAPPC12-222ENST00000493792 TNIP2Q8NFZ5 429 aa9.39□□□□□ -0.91
TRAPPC12-222ENST00000493792 OR5W2Q8NH69 310 aa9.39□□□□□ -0.91
TRAPPC12-222ENST00000493792 FBXO27Q8NI29 283 aa9.39□□□□□ -0.91
TRAPPC12-222ENST00000493792 ZNF563Q8TA94 476 aa9.39□□□□□ -0.91
TRAPPC12-222ENST00000493792 ZPLD1Q8TCW7 415 aa9.39□□□□□ -0.91
TRAPPC12-222ENST00000493792 WDR60Q8WVS4 1066 aa9.39□□□□□ -0.91
TRAPPC12-222ENST00000493792 ZG16BQ96DA0 208 aa9.39□□□□□ -0.91
TRAPPC12-222ENST00000493792 TMEM19Q96HH6 336 aa9.39□□□□□ -0.91
TRAPPC12-222ENST00000493792 NPAS1Q99742 590 aa9.39□□□□□ -0.91
TRAPPC12-222ENST00000493792 THUMPD3Q9BV44 507 aaKnown RBP9.39□□□□□ -0.91
TRAPPC12-222ENST00000493792 PINK1Q9BXM7 581 aa9.39□□□□□ -0.91
TRAPPC12-222ENST00000493792 PRRG4Q9BZD6 226 aa9.39□□□□□ -0.91
TRAPPC12-222ENST00000493792 LAT2Q9GZY6 243 aa9.39□□□□□ -0.91
TRAPPC12-222ENST00000493792 SLC38A1Q9H2H9 487 aa9.39□□□□□ -0.91
TRAPPC12-222ENST00000493792 KCNJ16Q9NPI9 418 aa9.39□□□□□ -0.91
TRAPPC12-222ENST00000493792 TMEM45AQ9NWC5 275 aa9.39□□□□□ -0.91
TRAPPC12-222ENST00000493792 THUMPD1Q9NXG2 353 aaKnown RBP9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms