RNA–Protein interactions for RNA: ENST00000492602.5

SEC13-219, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, human

TSL 3

Gene SEC13, Length 393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SEC13-219	ENST00000492602	ICAM5	Q9UMF0	924 aa		4.65	□□□□□ -1.67
SEC13-219	ENST00000492602	NFU1	Q9UMS0	254 aa		4.65	□□□□□ -1.67
SEC13-219	ENST00000492602	CHMP2B	Q9UQN3	213 aa		4.65	□□□□□ -1.67
SEC13-219	ENST00000492602	ACOT9	Q9Y305	439 aa		4.65	□□□□□ -1.67
SEC13-219	ENST00000492602	TSC22D4	Q9Y3Q8	395 aa		4.65	□□□□□ -1.67
SEC13-219	ENST00000492602	OARD1	Q9Y530	152 aa		4.65	□□□□□ -1.67
SEC13-219	ENST00000492602	PCDHGA11	Q9Y5H2	935 aa		4.65	□□□□□ -1.67
SEC13-219	ENST00000492602	WNK2	Q9Y3S1	2297 aa		4.65	□□□□□ -1.67
SEC13-219	ENST00000492602	HEATR1	Q9H583	2144 aa	Known RBP	4.64	□□□□□ -1.67
SEC13-219	ENST00000492602	NPEPPSL1	A6NEC2	478 aa		4.64	□□□□□ -1.67
SEC13-219	ENST00000492602	GLOD5	A6NK44	160 aa		4.64	□□□□□ -1.67
SEC13-219	ENST00000492602	ACOX3	O15254	700 aa		4.64	□□□□□ -1.67
SEC13-219	ENST00000492602	HOXA3	O43365	443 aa	Predicted RBP	4.64	□□□□□ -1.67
SEC13-219	ENST00000492602	PPIH	O43447	177 aa	Known RBP	4.64	□□□□□ -1.67
SEC13-219	ENST00000492602	SCO2	O43819	266 aa		4.64	□□□□□ -1.67
SEC13-219	ENST00000492602	GMFG	O60234	142 aa		4.64	□□□□□ -1.67
SEC13-219	ENST00000492602	ERLIN1	O75477	346 aa		4.64	□□□□□ -1.67
SEC13-219	ENST00000492602	CLPX	O76031	633 aa		4.64	□□□□□ -1.67
SEC13-219	ENST00000492602	PRKD3	O94806	890 aa		4.64	□□□□□ -1.67
SEC13-219	ENST00000492602	NDUFA7	O95182	113 aa		4.64	□□□□□ -1.67
SEC13-219	ENST00000492602	SLC35E2B	P0CK96	405 aa		4.64	□□□□□ -1.67
SEC13-219	ENST00000492602	SLC35E2	P0CK97	266 aa		4.64	□□□□□ -1.67
SEC13-219	ENST00000492602	PCNA	P12004	261 aa		4.64	□□□□□ -1.67
SEC13-219	ENST00000492602	GFAP	P14136	432 aa		4.64	□□□□□ -1.67
SEC13-219	ENST00000492602	COX5A	P20674	150 aa		4.64	□□□□□ -1.67
SEC13-219	ENST00000492602	HIST1H1T	P22492	207 aa	Predicted RBP	4.64	□□□□□ -1.67
SEC13-219	ENST00000492602	COL8A2	P25067	703 aa		4.64	□□□□□ -1.67
SEC13-219	ENST00000492602	EDNRA	P25101	427 aa		4.64	□□□□□ -1.67
SEC13-219	ENST00000492602	GALNS	P34059	522 aa		4.64	□□□□□ -1.67
SEC13-219	ENST00000492602	FEN1	P39748	380 aa	Known RBP	4.64	□□□□□ -1.67
SEC13-219	ENST00000492602	GP5	P40197	560 aa		4.64	□□□□□ -1.67
SEC13-219	ENST00000492602	SLC1A3	P43003	542 aa		4.64	□□□□□ -1.67
SEC13-219	ENST00000492602	SSR2	P43308	183 aa		4.64	□□□□□ -1.67
SEC13-219	ENST00000492602	OR3A2	P47893	321 aa		4.64	□□□□□ -1.67
SEC13-219	ENST00000492602	GAS1	P54826	345 aa		4.64	□□□□□ -1.67
SEC13-219	ENST00000492602	RAB10	P61026	200 aa		4.64	□□□□□ -1.67
SEC13-219	ENST00000492602	CKAP4	Q07065	602 aa	Known RBP	4.64	□□□□□ -1.67
SEC13-219	ENST00000492602	PDCD1	Q15116	288 aa		4.64	□□□□□ -1.67
SEC13-219	ENST00000492602	TGFBI	Q15582	683 aa		4.64	□□□□□ -1.67
SEC13-219	ENST00000492602	EFNB3	Q15768	340 aa		4.64	□□□□□ -1.67
SEC13-219	ENST00000492602	ADIPOQ	Q15848	244 aa		4.64	□□□□□ -1.67
SEC13-219	ENST00000492602	ADRM1	Q16186	407 aa		4.64	□□□□□ -1.67
SEC13-219	ENST00000492602	ARL13A	Q5H913	290 aa	Predicted RBP	4.64	□□□□□ -1.67
SEC13-219	ENST00000492602	PDSS1	Q5T2R2	415 aa		4.64	□□□□□ -1.67
SEC13-219	ENST00000492602	MED27	Q6P2C8	311 aa		4.64	□□□□□ -1.67
SEC13-219	ENST00000492602	FIP1L1	Q6UN15	594 aa	Known RBP	4.64	□□□□□ -1.67
SEC13-219	ENST00000492602	ESPNL	Q6ZVH7	1005 aa		4.64	□□□□□ -1.67
SEC13-219	ENST00000492602	PAGE2	Q7Z2X7	111 aa		4.64	□□□□□ -1.67
SEC13-219	ENST00000492602	UBE3D	Q7Z6J8	389 aa		4.64	□□□□□ -1.67
SEC13-219	ENST00000492602	JAZF1	Q86VZ6	243 aa		4.64	□□□□□ -1.67
SEC13-219	ENST00000492602	ZC3HC1	Q86WB0	502 aa	Known RBP	4.64	□□□□□ -1.67
SEC13-219	ENST00000492602	ZNF433	Q8N7K0	673 aa	Predicted RBP	4.64	□□□□□ -1.67
SEC13-219	ENST00000492602	MNS1	Q8NEH6	495 aa		4.64	□□□□□ -1.67
SEC13-219	ENST00000492602	PHF21A	Q96BD5	680 aa		4.64	□□□□□ -1.67
SEC13-219	ENST00000492602	C1GALT1C1	Q96EU7	318 aa		4.64	□□□□□ -1.67
SEC13-219	ENST00000492602	ERP44	Q9BS26	406 aa		4.64	□□□□□ -1.67
SEC13-219	ENST00000492602	MCMBP	Q9BTE3	642 aa		4.64	□□□□□ -1.67
SEC13-219	ENST00000492602	SORBS1	Q9BX66	1292 aa	Known RBP	4.64	□□□□□ -1.67
SEC13-219	ENST00000492602	MS4A7	Q9GZW8	240 aa	Predicted RBP	4.64	□□□□□ -1.67
SEC13-219	ENST00000492602	TPK1	Q9H3S4	243 aa		4.64	□□□□□ -1.67
SEC13-219	ENST00000492602	TMEM185B	Q9H7F4	350 aa		4.64	□□□□□ -1.67
SEC13-219	ENST00000492602	ZNF665	Q9H7R5	613 aa		4.64	□□□□□ -1.67
SEC13-219	ENST00000492602	CXorf21	Q9HAI6	301 aa		4.64	□□□□□ -1.67
SEC13-219	ENST00000492602	DYNLRB1	Q9NP97	96 aa		4.64	□□□□□ -1.67
SEC13-219	ENST00000492602	SAYSD1	Q9NPB0	183 aa		4.64	□□□□□ -1.67
SEC13-219	ENST00000492602	OPTC	Q9UBM4	332 aa		4.64	□□□□□ -1.67
SEC13-219	ENST00000492602	BCAP29	Q9UHQ4	241 aa		4.64	□□□□□ -1.67
SEC13-219	ENST00000492602	PHF11	Q9UIL8	331 aa		4.64	□□□□□ -1.67
SEC13-219	ENST00000492602	UTS2R	Q9UKP6	389 aa		4.64	□□□□□ -1.67
SEC13-219	ENST00000492602	TMCO1	Q9UM00	188 aa		4.64	□□□□□ -1.67
SEC13-219	ENST00000492602	VDAC3	Q9Y277	283 aa		4.64	□□□□□ -1.67
SEC13-219	ENST00000492602	CFL2	Q9Y281	166 aa		4.64	□□□□□ -1.67
SEC13-219	ENST00000492602	SNX24	Q9Y343	169 aa		4.64	□□□□□ -1.67
SEC13-219	ENST00000492602	PSAT1	Q9Y617	370 aa		4.64	□□□□□ -1.67
SEC13-219	ENST00000492602	TEX264	Q9Y6I9	313 aa		4.64	□□□□□ -1.67
SEC13-219	ENST00000492602	PCNX3	Q9H6A9	2034 aa		4.63	□□□□□ -1.67
SEC13-219	ENST00000492602		A0A0J9YW62	118 aa		4.63	□□□□□ -1.67
SEC13-219	ENST00000492602		A0A1W2PS29	197 aa		4.63	□□□□□ -1.67
SEC13-219	ENST00000492602	SUPT3H	B4E1H0	165 aa		4.63	□□□□□ -1.67
SEC13-219	ENST00000492602		C9JVG2	144 aa		4.63	□□□□□ -1.67
SEC13-219	ENST00000492602	hCG_2039718	K7EN88	272 aa		4.63	□□□□□ -1.67
SEC13-219	ENST00000492602	SAP18	O00422	153 aa	Known RBP	4.63	□□□□□ -1.67
SEC13-219	ENST00000492602	ADAMDEC1	O15204	470 aa		4.63	□□□□□ -1.67
SEC13-219	ENST00000492602	SMIM24	O75264	130 aa		4.63	□□□□□ -1.67
SEC13-219	ENST00000492602	SUPT3H	O75486	399 aa		4.63	□□□□□ -1.67
SEC13-219	ENST00000492602	SEC31A	O94979	1220 aa	Known RBP	4.63	□□□□□ -1.67
SEC13-219	ENST00000492602	IGHV3-9	P01782	118 aa		4.63	□□□□□ -1.67
SEC13-219	ENST00000492602	RBP1	P09455	135 aa		4.63	□□□□□ -1.67
SEC13-219	ENST00000492602	LTA4H	P09960	611 aa	Known RBP	4.63	□□□□□ -1.67
SEC13-219	ENST00000492602	ZNF37A	P17032	561 aa	Predicted RBP	4.63	□□□□□ -1.67
SEC13-219	ENST00000492602	CD22	P20273	847 aa		4.63	□□□□□ -1.67
SEC13-219	ENST00000492602	NT5E	P21589	574 aa		4.63	□□□□□ -1.67
SEC13-219	ENST00000492602	GATA3	P23771	443 aa		4.63	□□□□□ -1.67
SEC13-219	ENST00000492602	IL12B	P29460	328 aa		4.63	□□□□□ -1.67
SEC13-219	ENST00000492602	KRT20	P35900	424 aa		4.63	□□□□□ -1.67
SEC13-219	ENST00000492602	PIK3CB	P42338	1070 aa		4.63	□□□□□ -1.67
SEC13-219	ENST00000492602	CASP2	P42575	452 aa		4.63	□□□□□ -1.67
SEC13-219	ENST00000492602	MTNR1A	P48039	350 aa		4.63	□□□□□ -1.67
SEC13-219	ENST00000492602	ARFIP1	P53367	373 aa		4.63	□□□□□ -1.67
SEC13-219	ENST00000492602	PLTP	P55058	493 aa		4.63	□□□□□ -1.67

Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms