RNA–Protein interactions for RNA: ENST00000492449.5

VPS8-225, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 1 (best)

Gene VPS8, Length 2,980 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-225ENST00000492449 CA14Q9ULX7 337 aa9.05□□□□□ -0.96
VPS8-225ENST00000492449 ANGPT4Q9Y264 503 aa9.05□□□□□ -0.96
VPS8-225ENST00000492449 TRAV14DV4A0A0A6YYC5 116 aa9.05□□□□□ -0.96
VPS8-225ENST00000492449 H7C0S8 307 aa9.05□□□□□ -0.96
VPS8-225ENST00000492449 J3QRE1 110 aa9.05□□□□□ -0.96
VPS8-225ENST00000492449 HBP1O60381 514 aa9.05□□□□□ -0.96
VPS8-225ENST00000492449 B4GALT3O60512 393 aa9.05□□□□□ -0.96
VPS8-225ENST00000492449 STK16O75716 305 aa9.05□□□□□ -0.96
VPS8-225ENST00000492449 ACTL6AO96019 429 aa9.05□□□□□ -0.96
VPS8-225ENST00000492449 H1F0P07305 194 aaKnown RBP9.05□□□□□ -0.96
VPS8-225ENST00000492449 VAMP1P23763 118 aa9.05□□□□□ -0.96
VPS8-225ENST00000492449 RNASE12Q5GAN4 147 aaKnown RBP9.05□□□□□ -0.96
VPS8-225ENST00000492449 UBE2R2Q712K3 238 aaPredicted RBP9.05□□□□□ -0.96
VPS8-225ENST00000492449 TFGQ92734 400 aaPredicted RBP9.05□□□□□ -0.96
VPS8-225ENST00000492449 EMID1Q96A84 441 aaPredicted RBP9.05□□□□□ -0.96
VPS8-225ENST00000492449 EGFL8Q99944 293 aa9.05□□□□□ -0.96
VPS8-225ENST00000492449 SEMA3CQ99985 751 aa9.05□□□□□ -0.96
VPS8-225ENST00000492449 SLC32A1Q9H598 525 aa9.05□□□□□ -0.96
VPS8-225ENST00000492449 MIEF1Q9NQG6 463 aa9.05□□□□□ -0.96
VPS8-225ENST00000492449 LHX6Q9UPM6 363 aa9.05□□□□□ -0.96
VPS8-225ENST00000492449 EDNRBP24530 442 aa9.04□□□□□ -0.96
VPS8-225ENST00000492449 NFYBP25208 207 aa9.04□□□□□ -0.96
VPS8-225ENST00000492449 CERS1P27544 350 aa9.04□□□□□ -0.96
VPS8-225ENST00000492449 CTNNB1P35222 781 aa9.04□□□□□ -0.96
VPS8-225ENST00000492449 SRSF4Q08170 494 aaKnown RBP9.04□□□□□ -0.96
VPS8-225ENST00000492449 C2orf68Q2NKX9 166 aa9.04□□□□□ -0.96
VPS8-225ENST00000492449 SLC25A35Q3KQZ1 300 aa9.04□□□□□ -0.96
VPS8-225ENST00000492449 LINC00303Q3SY05 128 aa9.04□□□□□ -0.96
VPS8-225ENST00000492449 CPTPQ5TA50 214 aa9.04□□□□□ -0.96
VPS8-225ENST00000492449 APOOLQ6UXV4 268 aa9.04□□□□□ -0.96
VPS8-225ENST00000492449 IL34Q6ZMJ4 242 aa9.04□□□□□ -0.96
VPS8-225ENST00000492449 PARGQ86W56 976 aa9.04□□□□□ -0.96
VPS8-225ENST00000492449 KDF1Q8NAX2 398 aaPredicted RBP9.04□□□□□ -0.96
VPS8-225ENST00000492449 OR1J4Q8NGS1 313 aa9.04□□□□□ -0.96
VPS8-225ENST00000492449 OR6X1Q8NH79 312 aa9.04□□□□□ -0.96
VPS8-225ENST00000492449 RFKQ969G6 155 aa9.04□□□□□ -0.96
VPS8-225ENST00000492449 ARL11Q969Q4 196 aa9.04□□□□□ -0.96
VPS8-225ENST00000492449 CXorf40BQ96DE9 158 aa9.04□□□□□ -0.96
VPS8-225ENST00000492449 HS6ST2Q96MM7 605 aa9.04□□□□□ -0.96
VPS8-225ENST00000492449 VRK1Q99986 396 aaPredicted RBP9.04□□□□□ -0.96
VPS8-225ENST00000492449 XKR8Q9H6D3 395 aa9.04□□□□□ -0.96
VPS8-225ENST00000492449 CCDC86Q9H6F5 360 aaKnown RBP9.04□□□□□ -0.96
VPS8-225ENST00000492449 CHMP1AQ9HD42 196 aaPredicted RBP9.04□□□□□ -0.96
VPS8-225ENST00000492449 UQCC1Q9NVA1 299 aa9.04□□□□□ -0.96
VPS8-225ENST00000492449 TMEM248Q9NWD8 314 aa9.04□□□□□ -0.96
VPS8-225ENST00000492449 ZNF219Q9P2Y4 722 aaPredicted RBP9.04□□□□□ -0.96
VPS8-225ENST00000492449 CCDC88CQ9P219 2028 aa9.04□□□□□ -0.96
VPS8-225ENST00000492449 KANTRA0A1W2PQU2 76 aa9.04□□□□□ -0.96
VPS8-225ENST00000492449 GLTPD2A6NH11 291 aa9.04□□□□□ -0.96
VPS8-225ENST00000492449 TCAPO15273 167 aa9.04□□□□□ -0.96
VPS8-225ENST00000492449 PCDH8O95206 1070 aa9.04□□□□□ -0.96
VPS8-225ENST00000492449 IFNA2P01563 188 aa9.04□□□□□ -0.96
VPS8-225ENST00000492449 CD8AP01732 235 aa9.04□□□□□ -0.96
VPS8-225ENST00000492449 TRBC1P01850 177 aa9.04□□□□□ -0.96
VPS8-225ENST00000492449 ATP1B1P05026 303 aa9.04□□□□□ -0.96
VPS8-225ENST00000492449 EPXP11678 715 aa9.04□□□□□ -0.96
VPS8-225ENST00000492449 APEHP13798 732 aaKnown RBP9.04□□□□□ -0.96
VPS8-225ENST00000492449 ASMTP46597 345 aa9.04□□□□□ -0.96
VPS8-225ENST00000492449 SLC6A11P48066 632 aa9.04□□□□□ -0.96
VPS8-225ENST00000492449 TTLL4Q14679 1199 aa9.04□□□□□ -0.96
VPS8-225ENST00000492449 TOMM20Q15388 145 aa9.04□□□□□ -0.96
VPS8-225ENST00000492449 UBE2NLQ5JXB2 153 aa9.04□□□□□ -0.96
VPS8-225ENST00000492449 TMEM244Q5VVB8 128 aa9.04□□□□□ -0.96
VPS8-225ENST00000492449 TCEAL6Q6IPX3 200 aa9.04□□□□□ -0.96
VPS8-225ENST00000492449 TMEM71Q6P5X7 295 aa9.04□□□□□ -0.96
VPS8-225ENST00000492449 TSSK4Q6SA08 328 aa9.04□□□□□ -0.96
VPS8-225ENST00000492449 LRRC70Q7Z2Q7 622 aa9.04□□□□□ -0.96
VPS8-225ENST00000492449 C6orf120Q7Z4R8 191 aa9.04□□□□□ -0.96
VPS8-225ENST00000492449 ZNF683Q8IZ20 524 aa9.04□□□□□ -0.96
VPS8-225ENST00000492449 DNAAF1Q8NEP3 725 aa9.04□□□□□ -0.96
VPS8-225ENST00000492449 PKP4Q99569 1192 aa9.04□□□□□ -0.96
VPS8-225ENST00000492449 GINS4Q9BRT9 223 aa9.04□□□□□ -0.96
VPS8-225ENST00000492449 EBPLQ9BY08 206 aa9.04□□□□□ -0.96
VPS8-225ENST00000492449 CSNK1G1Q9HCP0 422 aa9.04□□□□□ -0.96
VPS8-225ENST00000492449 PRDM5Q9NQX1 630 aaPredicted RBP9.04□□□□□ -0.96
VPS8-225ENST00000492449 MMP26Q9NRE1 261 aa9.04□□□□□ -0.96
VPS8-225ENST00000492449 GFOD1Q9NXC2 390 aa9.04□□□□□ -0.96
VPS8-225ENST00000492449 RCC2Q9P258 522 aaKnown RBP9.04□□□□□ -0.96
VPS8-225ENST00000492449 GULP1Q9UBP9 304 aa9.04□□□□□ -0.96
VPS8-225ENST00000492449 RUVBL1Q9Y265 456 aaKnown RBP9.04□□□□□ -0.96
VPS8-225ENST00000492449 OR10H1Q9Y4A9 318 aa9.04□□□□□ -0.96
VPS8-225ENST00000492449 CHD5Q8TDI0 1954 aa9.04□□□□□ -0.96
VPS8-225ENST00000492449 PTPRDP23468 1912 aa9.04□□□□□ -0.96
VPS8-225ENST00000492449 TRAV1-2A0A0B4J238 106 aa9.03□□□□□ -0.96
VPS8-225ENST00000492449 SMIM28A0A1B0GU29 152 aa9.03□□□□□ -0.96
VPS8-225ENST00000492449 OR6C76A6NM76 312 aa9.03□□□□□ -0.96
VPS8-225ENST00000492449 OIP5O43482 229 aa9.03□□□□□ -0.96
VPS8-225ENST00000492449 PIRTP0C851 137 aa9.03□□□□□ -0.96
VPS8-225ENST00000492449 VSIG10L2P0DP72 767 aa9.03□□□□□ -0.96
VPS8-225ENST00000492449 SLC25A4P12235 298 aa9.03□□□□□ -0.96
VPS8-225ENST00000492449 RHOQP17081 205 aa9.03□□□□□ -0.96
VPS8-225ENST00000492449 MC4RP32245 332 aa9.03□□□□□ -0.96
VPS8-225ENST00000492449 HSD17B7P56937 341 aa9.03□□□□□ -0.96
VPS8-225ENST00000492449 TDGQ13569 410 aa9.03□□□□□ -0.96
VPS8-225ENST00000492449 NKPD1Q17RQ9 610 aa9.03□□□□□ -0.96
VPS8-225ENST00000492449 PYY3Q5JQD4 70 aa9.03□□□□□ -0.96
VPS8-225ENST00000492449 NKAPLQ5M9Q1 402 aa9.03□□□□□ -0.96
VPS8-225ENST00000492449 TCTN3Q6NUS6 607 aa9.03□□□□□ -0.96
VPS8-225ENST00000492449 TRIM40Q6P9F5 258 aa9.03□□□□□ -0.96
VPS8-225ENST00000492449 SLC29A4Q7RTT9 530 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms