RNA–Protein interactions for RNA: ENST00000491789.1

VPS45-209, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 3

Gene VPS45, Length 976 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-209ENST00000491789 CKMT1AP12532 417 aa6.79□□□□□ -1.32
VPS45-209ENST00000491789 PNLIPP16233 465 aa6.79□□□□□ -1.32
VPS45-209ENST00000491789 PSMB9P28065 219 aa6.79□□□□□ -1.32
VPS45-209ENST00000491789 RBM34P42696 430 aaKnown RBP6.79□□□□□ -1.32
VPS45-209ENST00000491789 PCYT1AP49585 367 aa6.79□□□□□ -1.32
VPS45-209ENST00000491789 PPM1FP49593 454 aaPredicted RBP6.79□□□□□ -1.32
VPS45-209ENST00000491789 GP2P55259 537 aaKnown RBP6.79□□□□□ -1.32
VPS45-209ENST00000491789 DCAF7P61962 342 aa6.79□□□□□ -1.32
VPS45-209ENST00000491789 EEF1A1P68104 462 aaKnown RBP6.79□□□□□ -1.32
VPS45-209ENST00000491789 E2F1Q01094 437 aa6.79□□□□□ -1.32
VPS45-209ENST00000491789 MGAT2Q10469 447 aa6.79□□□□□ -1.32
VPS45-209ENST00000491789 NFATC3Q12968 1075 aa6.79□□□□□ -1.32
VPS45-209ENST00000491789 SLC13A2Q13183 592 aa6.79□□□□□ -1.32
VPS45-209ENST00000491789 PIN1Q13526 163 aaPredicted RBP6.79□□□□□ -1.32
VPS45-209ENST00000491789 SEC23BQ15437 767 aa6.79□□□□□ -1.32
VPS45-209ENST00000491789 CYP27C1Q4G0S4 372 aa6.79□□□□□ -1.32
VPS45-209ENST00000491789 MFSD4BQ5TF39 518 aa6.79□□□□□ -1.32
VPS45-209ENST00000491789 SLC27A4Q6P1M0 643 aa6.79□□□□□ -1.32
VPS45-209ENST00000491789 ZNF613Q6PF04 617 aa6.79□□□□□ -1.32
VPS45-209ENST00000491789 WDR74Q6RFH5 385 aaPredicted RBP6.79□□□□□ -1.32
VPS45-209ENST00000491789 PCSK4Q6UW60 755 aa6.79□□□□□ -1.32
VPS45-209ENST00000491789 ZNF836Q6ZNA1 936 aa6.79□□□□□ -1.32
VPS45-209ENST00000491789 MBOAT2Q6ZWT7 520 aa6.79□□□□□ -1.32
VPS45-209ENST00000491789 ZNF550Q7Z398 422 aa6.79□□□□□ -1.32
VPS45-209ENST00000491789 MRGPREQ86SM8 312 aa6.79□□□□□ -1.32
VPS45-209ENST00000491789 VRK2Q86Y07 508 aa6.79□□□□□ -1.32
VPS45-209ENST00000491789 WFDC8Q8IUA0 241 aa6.79□□□□□ -1.32
VPS45-209ENST00000491789 LACC1Q8IV20 430 aa6.79□□□□□ -1.32
VPS45-209ENST00000491789 SLITRK4Q8IW52 837 aa6.79□□□□□ -1.32
VPS45-209ENST00000491789 FAM26EQ8N5C1 309 aa6.79□□□□□ -1.32
VPS45-209ENST00000491789 OR4D11Q8NGI4 311 aa6.79□□□□□ -1.32
VPS45-209ENST00000491789 OR9A4Q8NGU2 314 aa6.79□□□□□ -1.32
VPS45-209ENST00000491789 FGF11Q92914 225 aa6.79□□□□□ -1.32
VPS45-209ENST00000491789 RIT1Q92963 219 aa6.79□□□□□ -1.32
VPS45-209ENST00000491789 RFKQ969G6 155 aa6.79□□□□□ -1.32
VPS45-209ENST00000491789 NXPE2Q96DL1 559 aa6.79□□□□□ -1.32
VPS45-209ENST00000491789 YIPF6Q96EC8 236 aa6.79□□□□□ -1.32
VPS45-209ENST00000491789 HS6ST2Q96MM7 605 aa6.79□□□□□ -1.32
VPS45-209ENST00000491789 SH3GL3Q99963 347 aa6.79□□□□□ -1.32
VPS45-209ENST00000491789 ZNF559Q9BR84 538 aa6.79□□□□□ -1.32
VPS45-209ENST00000491789 FUNDC2Q9BWH2 189 aa6.79□□□□□ -1.32
VPS45-209ENST00000491789 KRTAP9-9Q9BYP9 154 aa6.79□□□□□ -1.32
VPS45-209ENST00000491789 KRTAP9-4Q9BYQ2 154 aa6.79□□□□□ -1.32
VPS45-209ENST00000491789 TRIM2Q9C040 744 aa6.79□□□□□ -1.32
VPS45-209ENST00000491789 HOXD1Q9GZZ0 328 aa6.79□□□□□ -1.32
VPS45-209ENST00000491789 Q9N2J8 555 aa6.79□□□□□ -1.32
VPS45-209ENST00000491789 FAM60AQ9NP50 221 aa6.79□□□□□ -1.32
VPS45-209ENST00000491789 ST6GALNAC1Q9NSC7 600 aaPredicted RBP6.79□□□□□ -1.32
VPS45-209ENST00000491789 MAN2C1Q9NTJ4 1040 aa6.79□□□□□ -1.32
VPS45-209ENST00000491789 IRAK4Q9NWZ3 460 aa6.79□□□□□ -1.32
VPS45-209ENST00000491789 ZNF226Q9NYT6 803 aa6.79□□□□□ -1.32
VPS45-209ENST00000491789 MRTO4Q9UKD2 239 aaKnown RBP6.79□□□□□ -1.32
VPS45-209ENST00000491789 SRPK3Q9UPE1 567 aa6.79□□□□□ -1.32
VPS45-209ENST00000491789 HEMK1Q9Y5R4 338 aaPredicted RBP6.79□□□□□ -1.32
VPS45-209ENST00000491789 CDH10Q9Y6N8 788 aa6.79□□□□□ -1.32
VPS45-209ENST00000491789 ITPR1Q14643 2758 aa6.78□□□□□ -1.32
VPS45-209ENST00000491789 CROCCQ5TZA2 2017 aa6.78□□□□□ -1.32
VPS45-209ENST00000491789 A0A087WUU8 490 aa6.78□□□□□ -1.32
VPS45-209ENST00000491789 IGHV1OR21-1A0A087WYE8 117 aa6.78□□□□□ -1.32
VPS45-209ENST00000491789 A0A1W2PS29 197 aa6.78□□□□□ -1.32
VPS45-209ENST00000491789 CDHR4A6H8M9 788 aa6.78□□□□□ -1.32
VPS45-209ENST00000491789 FOXS1O43638 330 aa6.78□□□□□ -1.32
VPS45-209ENST00000491789 LDB3O75112 727 aa6.78□□□□□ -1.32
VPS45-209ENST00000491789 SEMA7AO75326 666 aa6.78□□□□□ -1.32
VPS45-209ENST00000491789 C1QL1O75973 258 aa6.78□□□□□ -1.32
VPS45-209ENST00000491789 OR2B3O76000 313 aa6.78□□□□□ -1.32
VPS45-209ENST00000491789 INMTO95050 263 aa6.78□□□□□ -1.32
VPS45-209ENST00000491789 FADS2O95864 444 aaKnown RBP6.78□□□□□ -1.32
VPS45-209ENST00000491789 EPPINO95925 133 aa6.78□□□□□ -1.32
VPS45-209ENST00000491789 CBX7O95931 251 aa6.78□□□□□ -1.32
VPS45-209ENST00000491789 ANKRD34CP0C6C1 535 aa6.78□□□□□ -1.32
VPS45-209ENST00000491789 POU2F1P14859 743 aa6.78□□□□□ -1.32
VPS45-209ENST00000491789 ENDOUP21128 410 aaKnown RBP6.78□□□□□ -1.32
VPS45-209ENST00000491789 MMP11P24347 488 aa6.78□□□□□ -1.32
VPS45-209ENST00000491789 ACVR2AP27037 513 aa6.78□□□□□ -1.32
VPS45-209ENST00000491789 POU1F1P28069 291 aa6.78□□□□□ -1.32
VPS45-209ENST00000491789 EPHA2P29317 976 aa6.78□□□□□ -1.32
VPS45-209ENST00000491789 SLC15A1P46059 708 aa6.78□□□□□ -1.32
VPS45-209ENST00000491789 PPP1CAP62136 330 aa6.78□□□□□ -1.32
VPS45-209ENST00000491789 TUBA1BP68363 451 aa6.78□□□□□ -1.32
VPS45-209ENST00000491789 DAB2P98082 770 aa6.78□□□□□ -1.32
VPS45-209ENST00000491789 CDK5Q00535 292 aa6.78□□□□□ -1.32
VPS45-209ENST00000491789 OCA2Q04671 838 aa6.78□□□□□ -1.32
VPS45-209ENST00000491789 FUT7Q11130 342 aa6.78□□□□□ -1.32
VPS45-209ENST00000491789 TMED1Q13445 227 aa6.78□□□□□ -1.32
VPS45-209ENST00000491789 SQSTM1Q13501 440 aa6.78□□□□□ -1.32
VPS45-209ENST00000491789 C1DQ13901 141 aaKnown RBP6.78□□□□□ -1.32
VPS45-209ENST00000491789 IRF3Q14653 427 aa6.78□□□□□ -1.32
VPS45-209ENST00000491789 NCF4Q15080 339 aa6.78□□□□□ -1.32
VPS45-209ENST00000491789 ZNF141Q15928 474 aa6.78□□□□□ -1.32
VPS45-209ENST00000491789 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.78□□□□□ -1.32
VPS45-209ENST00000491789 DEFB133Q30KQ1 61 aa6.78□□□□□ -1.32
VPS45-209ENST00000491789 DEFB110Q30KQ9 67 aa6.78□□□□□ -1.32
VPS45-209ENST00000491789 KLHL22Q53GT1 634 aa6.78□□□□□ -1.32
VPS45-209ENST00000491789 TRMT12Q53H54 448 aaKnown RBP6.78□□□□□ -1.32
VPS45-209ENST00000491789 ARMC4Q5T2S8 1044 aa6.78□□□□□ -1.32
VPS45-209ENST00000491789 PLAG1Q6DJT9 500 aa6.78□□□□□ -1.32
VPS45-209ENST00000491789 CCDC81Q6ZN84 652 aa6.78□□□□□ -1.32
VPS45-209ENST00000491789 QSOX2Q6ZRP7 698 aa6.78□□□□□ -1.32
VPS45-209ENST00000491789 TUBA1AQ71U36 451 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 139.2 ms