RNA–Protein interactions for RNA: ENST00000491258.1

PHC3-213, Transcript of polyhomeotic homolog 3, humanhuman

TSL 1 (best)

Gene PHC3, Length 719 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-213ENST00000491258 NFAM1Q8NET5 270 aaPredicted RBP2.56□□□□□ -2
PHC3-213ENST00000491258 OR4C6Q8NH72 309 aa2.56□□□□□ -2
PHC3-213ENST00000491258 RXFP2Q8WXD0 754 aa2.56□□□□□ -2
PHC3-213ENST00000491258 PROX1Q92786 737 aa2.56□□□□□ -2
PHC3-213ENST00000491258 KLK6Q92876 244 aa2.56□□□□□ -2
PHC3-213ENST00000491258 FGF11Q92914 225 aa2.56□□□□□ -2
PHC3-213ENST00000491258 ISG20Q96AZ6 181 aaKnown RBP2.56□□□□□ -2
PHC3-213ENST00000491258 BMFQ96LC9 184 aa2.56□□□□□ -2
PHC3-213ENST00000491258 RUNDC3BQ96NL0 473 aa2.56□□□□□ -2
PHC3-213ENST00000491258 PCDHB18PQ96TA0 734 aa2.56□□□□□ -2
PHC3-213ENST00000491258 KLF6Q99612 283 aaPredicted RBP2.56□□□□□ -2
PHC3-213ENST00000491258 SLC17A9Q9BYT1 436 aa2.56□□□□□ -2
PHC3-213ENST00000491258 ZYG11BQ9C0D3 744 aa2.56□□□□□ -2
PHC3-213ENST00000491258 GANQ9H2C0 597 aa2.56□□□□□ -2
PHC3-213ENST00000491258 CCDC68Q9H2F9 335 aa2.56□□□□□ -2
PHC3-213ENST00000491258 PRORYQ9H606 182 aa2.56□□□□□ -2
PHC3-213ENST00000491258 NOL11Q9H8H0 719 aaKnown RBP2.56□□□□□ -2
PHC3-213ENST00000491258 ANKZF1Q9H8Y5 726 aa2.56□□□□□ -2
PHC3-213ENST00000491258 WDR41Q9HAD4 459 aa2.56□□□□□ -2
PHC3-213ENST00000491258 SAMSN1Q9NSI8 373 aaKnown RBP2.56□□□□□ -2
PHC3-213ENST00000491258 OR12D3Q9UGF7 316 aa2.56□□□□□ -2
PHC3-213ENST00000491258 NOCTQ9UK39 431 aaKnown RBP2.56□□□□□ -2
PHC3-213ENST00000491258 STAP1Q9ULZ2 295 aa2.56□□□□□ -2
PHC3-213ENST00000491258 PLEKHA6Q9Y2H5 1048 aa2.56□□□□□ -2
PHC3-213ENST00000491258 FADS3Q9Y5Q0 445 aa2.56□□□□□ -2
PHC3-213ENST00000491258 U3KQA8 63 aa2.56□□□□□ -2
PHC3-213ENST00000491258 TEX15Q9BXT5 2789 aa2.56□□□□□ -2
PHC3-213ENST00000491258 FRYLO94915 3013 aa2.56□□□□□ -2
PHC3-213ENST00000491258 DMXL1Q9Y485 3027 aa2.56□□□□□ -2
PHC3-213ENST00000491258 RALGAPA2Q2PPJ7 1873 aa2.56□□□□□ -2
PHC3-213ENST00000491258 SMG1Q96Q15 3661 aaKnown RBP2.55□□□□□ -2
PHC3-213ENST00000491258 SPTY2D1-AS1A0A0U1RR47 76 aa2.55□□□□□ -2
PHC3-213ENST00000491258 FAM170AA1A519 330 aa2.55□□□□□ -2
PHC3-213ENST00000491258 SIGLEC16A6NMB1 481 aa2.55□□□□□ -2
PHC3-213ENST00000491258 A8MVM7 634 aa2.55□□□□□ -2
PHC3-213ENST00000491258 TCP11X1B4DZS4 312 aa2.55□□□□□ -2
PHC3-213ENST00000491258 GOLGA8SH3BPF8 625 aa2.55□□□□□ -2
PHC3-213ENST00000491258 SPRY1O43609 319 aaPredicted RBP2.55□□□□□ -2
PHC3-213ENST00000491258 KDELR3O43731 214 aa2.55□□□□□ -2
PHC3-213ENST00000491258 GSRP00390 522 aa2.55□□□□□ -2
PHC3-213ENST00000491258 PTMAP06454 111 aaKnown RBP2.55□□□□□ -2
PHC3-213ENST00000491258 GP1BAP07359 652 aa2.55□□□□□ -2
PHC3-213ENST00000491258 PLEKP08567 350 aaPredicted RBP2.55□□□□□ -2
PHC3-213ENST00000491258 SAGP10523 405 aaPredicted RBP2.55□□□□□ -2
PHC3-213ENST00000491258 KRT3P12035 628 aa2.55□□□□□ -2
PHC3-213ENST00000491258 ADRB3P13945 408 aa2.55□□□□□ -2
PHC3-213ENST00000491258 CD22P20273 847 aa2.55□□□□□ -2
PHC3-213ENST00000491258 HNRNPA2B1P22626 353 aaKnown RBP2.55□□□□□ -2
PHC3-213ENST00000491258 SDC4P31431 198 aa2.55□□□□□ -2
PHC3-213ENST00000491258 FCGR2BP31994 310 aaPredicted RBP2.55□□□□□ -2
PHC3-213ENST00000491258 FCGR2CP31995 323 aa2.55□□□□□ -2
PHC3-213ENST00000491258 SFTPDP35247 375 aa2.55□□□□□ -2
PHC3-213ENST00000491258 RABIFP47224 123 aa2.55□□□□□ -2
PHC3-213ENST00000491258 KLK7P49862 253 aa2.55□□□□□ -2
PHC3-213ENST00000491258 SERPINH1P50454 418 aaKnown RBP2.55□□□□□ -2
PHC3-213ENST00000491258 CCNHP51946 323 aaPredicted RBP2.55□□□□□ -2
PHC3-213ENST00000491258 PFN3P60673 137 aa2.55□□□□□ -2
PHC3-213ENST00000491258 POLR2FP61218 127 aaKnown RBP2.55□□□□□ -2
PHC3-213ENST00000491258 RPS21P63220 83 aaKnown RBP2.55□□□□□ -2
PHC3-213ENST00000491258 ARF5P84085 180 aa2.55□□□□□ -2
PHC3-213ENST00000491258 KRT31Q15323 416 aa2.55□□□□□ -2
PHC3-213ENST00000491258 CYTH1Q15438 398 aa2.55□□□□□ -2
PHC3-213ENST00000491258 VWC2Q2TAL6 325 aa2.55□□□□□ -2
PHC3-213ENST00000491258 HSP90AA4PQ58FG1 418 aa2.55□□□□□ -2
PHC3-213ENST00000491258 ZNF542PQ5EBM4 170 aa2.55□□□□□ -2
PHC3-213ENST00000491258 TPRG1LQ5T0D9 272 aa2.55□□□□□ -2
PHC3-213ENST00000491258 RWDD4Q6NW29 188 aaKnown RBP2.55□□□□□ -2
PHC3-213ENST00000491258 C22orf39Q6P5X5 142 aa2.55□□□□□ -2
PHC3-213ENST00000491258 WDR59Q6PJI9 974 aa2.55□□□□□ -2
PHC3-213ENST00000491258 GCNT7Q6ZNI0 430 aa2.55□□□□□ -2
PHC3-213ENST00000491258 PHLDB2Q86SQ0 1253 aa2.55□□□□□ -2
PHC3-213ENST00000491258 ZSCAN30Q86W11 494 aa2.55□□□□□ -2
PHC3-213ENST00000491258 ZNF677Q86XU0 584 aa2.55□□□□□ -2
PHC3-213ENST00000491258 PHF13Q86YI8 300 aaPredicted RBP2.55□□□□□ -2
PHC3-213ENST00000491258 PYROXD2Q8N2H3 581 aa2.55□□□□□ -2
PHC3-213ENST00000491258 TTC30BQ8N4P2 665 aa2.55□□□□□ -2
PHC3-213ENST00000491258 MSANTD4Q8NCY6 345 aa2.55□□□□□ -2
PHC3-213ENST00000491258 JOSD2Q8TAC2 188 aa2.55□□□□□ -2
PHC3-213ENST00000491258 GTSF1Q8WW33 167 aa2.55□□□□□ -2
PHC3-213ENST00000491258 NTAN1Q96AB6 310 aa2.55□□□□□ -2
PHC3-213ENST00000491258 RAB7BQ96AH8 199 aa2.55□□□□□ -2
PHC3-213ENST00000491258 NXPE2Q96DL1 559 aa2.55□□□□□ -2
PHC3-213ENST00000491258 CCDC114Q96M63 670 aa2.55□□□□□ -2
PHC3-213ENST00000491258 FEVQ99581 238 aa2.55□□□□□ -2
PHC3-213ENST00000491258 IL12RB2Q99665 862 aa2.55□□□□□ -2
PHC3-213ENST00000491258 CPNE1Q99829 537 aa2.55□□□□□ -2
PHC3-213ENST00000491258 CALN1Q9BXU9 219 aa2.55□□□□□ -2
PHC3-213ENST00000491258 RNF121Q9H920 327 aa2.55□□□□□ -2
PHC3-213ENST00000491258 SP140LQ9H930 580 aa2.55□□□□□ -2
PHC3-213ENST00000491258 KCNK13Q9HB14 408 aa2.55□□□□□ -2
PHC3-213ENST00000491258 PLXNA4Q9HCM2 1894 aa2.55□□□□□ -2
PHC3-213ENST00000491258 DYRK4Q9NR20 520 aa2.55□□□□□ -2
PHC3-213ENST00000491258 CHMP5Q9NZZ3 219 aa2.55□□□□□ -2
PHC3-213ENST00000491258 ARMCX1Q9P291 453 aa2.55□□□□□ -2
PHC3-213ENST00000491258 FBXL4Q9UKA2 621 aa2.55□□□□□ -2
PHC3-213ENST00000491258 NEU3Q9UQ49 428 aa2.55□□□□□ -2
PHC3-213ENST00000491258 MFHAS1Q9Y4C4 1052 aa2.55□□□□□ -2
PHC3-213ENST00000491258 SNX8Q9Y5X2 465 aa2.55□□□□□ -2
PHC3-213ENST00000491258 LAMA5O15230 3695 aa2.55□□□□□ -2
PHC3-213ENST00000491258 FRYQ5TBA9 3013 aa2.55□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms