RNA–Protein interactions for RNA: ENST00000489898.1

SRSF4-204, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 3

Gene SRSF4, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-204ENST00000489898 HOXC12P31275 282 aa10.55□□□□□ -0.72
SRSF4-204ENST00000489898 GCKP35557 465 aa10.55□□□□□ -0.72
SRSF4-204ENST00000489898 RPL3P39023 403 aaKnown RBP10.55□□□□□ -0.72
SRSF4-204ENST00000489898 CDKN2CP42773 168 aa10.55□□□□□ -0.72
SRSF4-204ENST00000489898 SLC1A6P48664 564 aa10.55□□□□□ -0.72
SRSF4-204ENST00000489898 RAC1P63000 192 aa10.55□□□□□ -0.72
SRSF4-204ENST00000489898 ZNF141Q15928 474 aa10.55□□□□□ -0.72
SRSF4-204ENST00000489898 OR2A2Q6IF42 318 aa10.55□□□□□ -0.72
SRSF4-204ENST00000489898 TYW3Q6IPR3 259 aaKnown RBP10.55□□□□□ -0.72
SRSF4-204ENST00000489898 ANKRD46Q86W74 232 aa10.55□□□□□ -0.72
SRSF4-204ENST00000489898 KIF18BQ86Y91 864 aa10.55□□□□□ -0.72
SRSF4-204ENST00000489898 NUDCD3Q8IVD9 361 aa10.55□□□□□ -0.72
SRSF4-204ENST00000489898 MISPQ8IVT2 679 aa10.55□□□□□ -0.72
SRSF4-204ENST00000489898 LRRC34Q8IZ02 419 aa10.55□□□□□ -0.72
SRSF4-204ENST00000489898 CNEP1R1Q8N9A8 125 aa10.55□□□□□ -0.72
SRSF4-204ENST00000489898 WFDC11Q8NEX6 87 aa10.55□□□□□ -0.72
SRSF4-204ENST00000489898 OR6K3Q8NGY3 331 aa10.55□□□□□ -0.72
SRSF4-204ENST00000489898 OR2V1Q8NHB1 315 aa10.55□□□□□ -0.72
SRSF4-204ENST00000489898 B4GALNT2Q8NHY0 566 aa10.55□□□□□ -0.72
SRSF4-204ENST00000489898 ABHD3Q8WU67 409 aa10.55□□□□□ -0.72
SRSF4-204ENST00000489898 JADE3Q92613 823 aa10.55□□□□□ -0.72
SRSF4-204ENST00000489898 NUF2Q9BZD4 464 aa10.55□□□□□ -0.72
SRSF4-204ENST00000489898 SAP130Q9H0E3 1048 aa10.55□□□□□ -0.72
SRSF4-204ENST00000489898 PTGES2Q9H7Z7 377 aa10.55□□□□□ -0.72
SRSF4-204ENST00000489898 SDHAF3Q9NRP4 125 aa10.55□□□□□ -0.72
SRSF4-204ENST00000489898 AIG1Q9NVV5 245 aa10.55□□□□□ -0.72
SRSF4-204ENST00000489898 KLHL28Q9NXS3 571 aa10.55□□□□□ -0.72
SRSF4-204ENST00000489898 C6orf203Q9P0P8 240 aaPredicted RBP10.55□□□□□ -0.72
SRSF4-204ENST00000489898 MRTO4Q9UKD2 239 aaKnown RBP10.55□□□□□ -0.72
SRSF4-204ENST00000489898 CARD8Q9Y2G2 431 aa10.55□□□□□ -0.72
SRSF4-204ENST00000489898 KLF4O43474 513 aa10.54□□□□□ -0.72
SRSF4-204ENST00000489898 HSPA4LO95757 839 aa10.54□□□□□ -0.72
SRSF4-204ENST00000489898 RAF1P04049 648 aa10.54□□□□□ -0.72
SRSF4-204ENST00000489898 GUSBP08236 651 aa10.54□□□□□ -0.72
SRSF4-204ENST00000489898 RPS4Y1P22090 263 aaKnown RBP10.54□□□□□ -0.72
SRSF4-204ENST00000489898 PGM1P36871 562 aa10.54□□□□□ -0.72
SRSF4-204ENST00000489898 EIF1AXP47813 144 aaKnown RBP10.54□□□□□ -0.72
SRSF4-204ENST00000489898 ATP12AP54707 1039 aa10.54□□□□□ -0.72
SRSF4-204ENST00000489898 SUMO3P55854 103 aaPredicted RBP10.54□□□□□ -0.72
SRSF4-204ENST00000489898 RIPPLY3P57055 190 aa10.54□□□□□ -0.72
SRSF4-204ENST00000489898 DEFB113Q30KQ7 82 aa10.54□□□□□ -0.72
SRSF4-204ENST00000489898 CEP85LQ5SZL2 805 aa10.54□□□□□ -0.72
SRSF4-204ENST00000489898 PDZK1Q5T2W1 519 aa10.54□□□□□ -0.72
SRSF4-204ENST00000489898 TFAP2EQ6VUC0 442 aa10.54□□□□□ -0.72
SRSF4-204ENST00000489898 ESPNLQ6ZVH7 1005 aa10.54□□□□□ -0.72
SRSF4-204ENST00000489898 MTERF4Q7Z6M4 381 aaKnown RBP10.54□□□□□ -0.72
SRSF4-204ENST00000489898 ATG4DQ86TL0 474 aaPredicted RBP10.54□□□□□ -0.72
SRSF4-204ENST00000489898 GABRG1Q8N1C3 465 aa10.54□□□□□ -0.72
SRSF4-204ENST00000489898 ZG16BQ96DA0 208 aa10.54□□□□□ -0.72
SRSF4-204ENST00000489898 NEURL3Q96EH8 262 aa10.54□□□□□ -0.72
SRSF4-204ENST00000489898 GMPPAQ96IJ6 420 aaPredicted RBP10.54□□□□□ -0.72
SRSF4-204ENST00000489898 KLHL15Q96M94 604 aa10.54□□□□□ -0.72
SRSF4-204ENST00000489898 CCDC115Q96NT0 180 aa10.54□□□□□ -0.72
SRSF4-204ENST00000489898 TMEM204Q9BSN7 226 aa10.54□□□□□ -0.72
SRSF4-204ENST00000489898 PLSCR4Q9NRQ2 329 aa10.54□□□□□ -0.72
SRSF4-204ENST00000489898 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.54□□□□□ -0.72
SRSF4-204ENST00000489898 DTNAQ9Y4J8 743 aa10.54□□□□□ -0.72
SRSF4-204ENST00000489898 SNX8Q9Y5X2 465 aa10.54□□□□□ -0.72
SRSF4-204ENST00000489898 GPR45Q9Y5Y3 372 aa10.54□□□□□ -0.72
SRSF4-204ENST00000489898 USF3Q68DE3 2245 aa10.54□□□□□ -0.72
SRSF4-204ENST00000489898 DSPPQ9NZW4 1301 aa10.54□□□□□ -0.72
SRSF4-204ENST00000489898 ABCA2Q9BZC7 2435 aa10.54□□□□□ -0.72
SRSF4-204ENST00000489898 ANK2Q01484 3957 aa10.53□□□□□ -0.72
SRSF4-204ENST00000489898 FBN1P35555 2871 aaKnown RBP10.53□□□□□ -0.72
SRSF4-204ENST00000489898 CLDN24A6NM45 220 aa10.53□□□□□ -0.72
SRSF4-204ENST00000489898 HMGN4O00479 90 aa10.53□□□□□ -0.72
SRSF4-204ENST00000489898 SCDO00767 359 aa10.53□□□□□ -0.72
SRSF4-204ENST00000489898 DYNC1I1O14576 645 aa10.53□□□□□ -0.72
SRSF4-204ENST00000489898 SMAD9O15198 467 aaKnown RBP10.53□□□□□ -0.72
SRSF4-204ENST00000489898 RGS16O15492 202 aaPredicted RBP10.53□□□□□ -0.72
SRSF4-204ENST00000489898 SMNDC1O75940 238 aaKnown RBP eCLIP10.53□□□□□ -0.72
SRSF4-204ENST00000489898 FCGR2AP12318 317 aa10.53□□□□□ -0.72
SRSF4-204ENST00000489898 HOXB4P17483 251 aaPredicted RBP10.53□□□□□ -0.72
SRSF4-204ENST00000489898 CPA2P48052 419 aa10.53□□□□□ -0.72
SRSF4-204ENST00000489898 RPL14P50914 215 aaKnown RBP10.53□□□□□ -0.72
SRSF4-204ENST00000489898 P2RX1P51575 399 aa10.53□□□□□ -0.72
SRSF4-204ENST00000489898 CASP9P55211 416 aa10.53□□□□□ -0.72
SRSF4-204ENST00000489898 FGFBP1Q14512 234 aa10.53□□□□□ -0.72
SRSF4-204ENST00000489898 ARHGAP11BQ3KRB8 267 aa10.53□□□□□ -0.72
SRSF4-204ENST00000489898 ABLIM2Q6H8Q1 611 aa10.53□□□□□ -0.72
SRSF4-204ENST00000489898 C6orf120Q7Z4R8 191 aa10.53□□□□□ -0.72
SRSF4-204ENST00000489898 ZNF527Q8NB42 609 aa10.53□□□□□ -0.72
SRSF4-204ENST00000489898 FBXO27Q8NI29 283 aa10.53□□□□□ -0.72
SRSF4-204ENST00000489898 ZNF75CPQ92670 426 aaPredicted RBP10.53□□□□□ -0.72
SRSF4-204ENST00000489898 MOAP1Q96BY2 351 aa10.53□□□□□ -0.72
SRSF4-204ENST00000489898 POM121Q96HA1 1249 aa10.53□□□□□ -0.72
SRSF4-204ENST00000489898 SLC35G5Q96KT7 338 aa10.53□□□□□ -0.72
SRSF4-204ENST00000489898 INPP5KQ9BT40 448 aa10.53□□□□□ -0.72
SRSF4-204ENST00000489898 QRSL1Q9H0R6 528 aaKnown RBP10.53□□□□□ -0.72
SRSF4-204ENST00000489898 OR51I1Q9H343 314 aa10.53□□□□□ -0.72
SRSF4-204ENST00000489898 ATAD3AQ9NVI7 634 aa10.53□□□□□ -0.72
SRSF4-204ENST00000489898 CHST2Q9Y4C5 530 aa10.53□□□□□ -0.72
SRSF4-204ENST00000489898 MXRA5Q9NR99 2828 aa10.53□□□□□ -0.72
SRSF4-204ENST00000489898 TMEM120BA0PK00 339 aa10.52□□□□□ -0.73
SRSF4-204ENST00000489898 SERINC4A6NH21 518 aa10.52□□□□□ -0.73
SRSF4-204ENST00000489898 ZNF814B7Z6K7 855 aa10.52□□□□□ -0.73
SRSF4-204ENST00000489898 E9PBE3 544 aa10.52□□□□□ -0.73
SRSF4-204ENST00000489898 TUBBP07437 444 aa10.52□□□□□ -0.73
SRSF4-204ENST00000489898 CHRM4P08173 479 aa10.52□□□□□ -0.73
SRSF4-204ENST00000489898 ADH6P28332 368 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms