RNA–Protein interactions for RNA: ENST00000489554.1

SCAMP4-208, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 3

Gene SCAMP4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-208ENST00000489554 GABRA3P34903 492 aa9.61□□□□□ -0.87
SCAMP4-208ENST00000489554 KRT20P35900 424 aa9.61□□□□□ -0.87
SCAMP4-208ENST00000489554 NUP107P57740 925 aa9.61□□□□□ -0.87
SCAMP4-208ENST00000489554 CDK6Q00534 326 aa9.61□□□□□ -0.87
SCAMP4-208ENST00000489554 PMPCAQ10713 525 aa9.61□□□□□ -0.87
SCAMP4-208ENST00000489554 SCARB2Q14108 478 aa9.61□□□□□ -0.87
SCAMP4-208ENST00000489554 VEZF1Q14119 521 aa9.61□□□□□ -0.87
SCAMP4-208ENST00000489554 ARHGAP11BQ3KRB8 267 aa9.61□□□□□ -0.87
SCAMP4-208ENST00000489554 RPS26P11Q5JNZ5 115 aaPredicted RBP9.61□□□□□ -0.87
SCAMP4-208ENST00000489554 DCST2Q5T1A1 773 aa9.61□□□□□ -0.87
SCAMP4-208ENST00000489554 CCNJQ5T5M9 372 aa9.61□□□□□ -0.87
SCAMP4-208ENST00000489554 BICRALQ6AI39 1079 aa9.61□□□□□ -0.87
SCAMP4-208ENST00000489554 TIGD3Q6B0B8 471 aa9.61□□□□□ -0.87
SCAMP4-208ENST00000489554 FRRS1Q6ZNA5 592 aa9.61□□□□□ -0.87
SCAMP4-208ENST00000489554 CCDC80Q76M96 950 aa9.61□□□□□ -0.87
SCAMP4-208ENST00000489554 GDF7Q7Z4P5 450 aa9.61□□□□□ -0.87
SCAMP4-208ENST00000489554 GALNT10Q86SR1 603 aa9.61□□□□□ -0.87
SCAMP4-208ENST00000489554 SLC44A2Q8IWA5 706 aaPredicted RBP9.61□□□□□ -0.87
SCAMP4-208ENST00000489554 C11orf65Q8NCR3 313 aa9.61□□□□□ -0.87
SCAMP4-208ENST00000489554 LILRB4Q8NHJ6 448 aa9.61□□□□□ -0.87
SCAMP4-208ENST00000489554 ADAMTS15Q8TE58 950 aa9.61□□□□□ -0.87
SCAMP4-208ENST00000489554 HGDQ93099 445 aa9.61□□□□□ -0.87
SCAMP4-208ENST00000489554 CCDC124Q96CT7 223 aaKnown RBP9.61□□□□□ -0.87
SCAMP4-208ENST00000489554 NTNG2Q96CW9 530 aa9.61□□□□□ -0.87
SCAMP4-208ENST00000489554 TMCO6Q96DC7 493 aa9.61□□□□□ -0.87
SCAMP4-208ENST00000489554 DTNBP1Q96EV8 351 aa9.61□□□□□ -0.87
SCAMP4-208ENST00000489554 TRNT1Q96Q11 434 aaKnown RBP9.61□□□□□ -0.87
SCAMP4-208ENST00000489554 SDF2Q99470 211 aa9.61□□□□□ -0.87
SCAMP4-208ENST00000489554 SPOCK3Q9BQ16 436 aa9.61□□□□□ -0.87
SCAMP4-208ENST00000489554 BTBD2Q9BX70 525 aa9.61□□□□□ -0.87
SCAMP4-208ENST00000489554 OSBPL11Q9BXB4 747 aa9.61□□□□□ -0.87
SCAMP4-208ENST00000489554 ZNF350Q9GZX5 532 aa9.61□□□□□ -0.87
SCAMP4-208ENST00000489554 SLC6A15Q9H2J7 730 aa9.61□□□□□ -0.87
SCAMP4-208ENST00000489554 VCXQ9H320 206 aa9.61□□□□□ -0.87
SCAMP4-208ENST00000489554 UBQLN3Q9H347 655 aa9.61□□□□□ -0.87
SCAMP4-208ENST00000489554 BCL2L10Q9HD36 194 aa9.61□□□□□ -0.87
SCAMP4-208ENST00000489554 SPRR3Q9UBC9 169 aa9.61□□□□□ -0.87
SCAMP4-208ENST00000489554 KCNE5Q9UJ90 142 aa9.61□□□□□ -0.87
SCAMP4-208ENST00000489554 RNF6Q9Y252 685 aa9.61□□□□□ -0.87
SCAMP4-208ENST00000489554 TCRBV5S2A0A599 114 aa9.6□□□□□ -0.87
SCAMP4-208ENST00000489554 PRAMEF25A6NGN4 478 aa9.6□□□□□ -0.87
SCAMP4-208ENST00000489554 DUXAA6NLW8 204 aa9.6□□□□□ -0.87
SCAMP4-208ENST00000489554 AQP12BA6NM10 295 aa9.6□□□□□ -0.87
SCAMP4-208ENST00000489554 NPIPB9F8W1W9 429 aa9.6□□□□□ -0.87
SCAMP4-208ENST00000489554 CXCR6O00574 342 aa9.6□□□□□ -0.87
SCAMP4-208ENST00000489554 SNPHO15079 494 aa9.6□□□□□ -0.87
SCAMP4-208ENST00000489554 TSPAN2O60636 221 aa9.6□□□□□ -0.87
SCAMP4-208ENST00000489554 UGT2B11O75310 529 aa9.6□□□□□ -0.87
SCAMP4-208ENST00000489554 REM1O75628 298 aa9.6□□□□□ -0.87
SCAMP4-208ENST00000489554 TRAPPC6AO75865 159 aa9.6□□□□□ -0.87
SCAMP4-208ENST00000489554 PGM3O95394 542 aa9.6□□□□□ -0.87
SCAMP4-208ENST00000489554 H6PDO95479 791 aa9.6□□□□□ -0.87
SCAMP4-208ENST00000489554 GUSBP08236 651 aa9.6□□□□□ -0.87
SCAMP4-208ENST00000489554 UMPSP11172 480 aa9.6□□□□□ -0.87
SCAMP4-208ENST00000489554 RPS4Y1P22090 263 aaKnown RBP9.6□□□□□ -0.87
SCAMP4-208ENST00000489554 POU6F2P78424 691 aaPredicted RBP9.6□□□□□ -0.87
SCAMP4-208ENST00000489554 MRPS22P82650 360 aaKnown RBP9.6□□□□□ -0.87
SCAMP4-208ENST00000489554 PLAURQ03405 335 aa9.6□□□□□ -0.87
SCAMP4-208ENST00000489554 EFR3AQ14156 821 aa9.6□□□□□ -0.87
SCAMP4-208ENST00000489554 C1orf185Q5T7R7 199 aa9.6□□□□□ -0.87
SCAMP4-208ENST00000489554 FNDC7Q5VTL7 733 aa9.6□□□□□ -0.87
SCAMP4-208ENST00000489554 PRAMEF8Q5VWM4 474 aa9.6□□□□□ -0.87
SCAMP4-208ENST00000489554 PRAMEF7Q5VXH5 474 aa9.6□□□□□ -0.87
SCAMP4-208ENST00000489554 DESI1Q6ICB0 168 aa9.6□□□□□ -0.87
SCAMP4-208ENST00000489554 TYW3Q6IPR3 259 aaKnown RBP9.6□□□□□ -0.87
SCAMP4-208ENST00000489554 LCN8Q6JVE9 175 aa9.6□□□□□ -0.87
SCAMP4-208ENST00000489554 ERICH5Q6P6B1 374 aa9.6□□□□□ -0.87
SCAMP4-208ENST00000489554 COMTD1Q86VU5 262 aa9.6□□□□□ -0.87
SCAMP4-208ENST00000489554 DHFR2Q86XF0 187 aa9.6□□□□□ -0.87
SCAMP4-208ENST00000489554 AQP12AQ8IXF9 295 aa9.6□□□□□ -0.87
SCAMP4-208ENST00000489554 RPRMLQ8N4K4 120 aa9.6□□□□□ -0.87
SCAMP4-208ENST00000489554 METTL25Q8N6Q8 603 aa9.6□□□□□ -0.87
SCAMP4-208ENST00000489554 COX18Q8N8Q8 333 aa9.6□□□□□ -0.87
SCAMP4-208ENST00000489554 HIPK4Q8NE63 616 aa9.6□□□□□ -0.87
SCAMP4-208ENST00000489554 OR1J4Q8NGS1 313 aa9.6□□□□□ -0.87
SCAMP4-208ENST00000489554 GPR151Q8TDV0 419 aa9.6□□□□□ -0.87
SCAMP4-208ENST00000489554 RNF138Q8WVD3 245 aa9.6□□□□□ -0.87
SCAMP4-208ENST00000489554 DNAJC9Q8WXX5 260 aa9.6□□□□□ -0.87
SCAMP4-208ENST00000489554 TMBIM1Q969X1 311 aa9.6□□□□□ -0.87
SCAMP4-208ENST00000489554 TAMM41Q96BW9 452 aa9.6□□□□□ -0.87
SCAMP4-208ENST00000489554 ZG16BQ96DA0 208 aa9.6□□□□□ -0.87
SCAMP4-208ENST00000489554 DUS3LQ96G46 650 aaKnown RBP9.6□□□□□ -0.87
SCAMP4-208ENST00000489554 RMND5BQ96G75 393 aaPredicted RBP9.6□□□□□ -0.87
SCAMP4-208ENST00000489554 COL21A1Q96P44 957 aa9.6□□□□□ -0.87
SCAMP4-208ENST00000489554 GNRHR2Q96P88 292 aa9.6□□□□□ -0.87
SCAMP4-208ENST00000489554 NODALQ96S42 347 aa9.6□□□□□ -0.87
SCAMP4-208ENST00000489554 TREX2Q9BQ50 279 aaPredicted RBP9.6□□□□□ -0.87
SCAMP4-208ENST00000489554 TTYH2Q9BSA4 534 aa9.6□□□□□ -0.87
SCAMP4-208ENST00000489554 KCNJ16Q9NPI9 418 aa9.6□□□□□ -0.87
SCAMP4-208ENST00000489554 THUMPD1Q9NXG2 353 aaKnown RBP9.6□□□□□ -0.87
SCAMP4-208ENST00000489554 KLRF1Q9NZS2 232 aa9.6□□□□□ -0.87
SCAMP4-208ENST00000489554 ACTR3BQ9P1U1 418 aa9.6□□□□□ -0.87
SCAMP4-208ENST00000489554 P2RX2Q9UBL9 471 aa9.6□□□□□ -0.87
SCAMP4-208ENST00000489554 TNFRSF10DQ9UBN6 386 aa9.6□□□□□ -0.87
SCAMP4-208ENST00000489554 NKX1-2Q9UD57 310 aaPredicted RBP9.6□□□□□ -0.87
SCAMP4-208ENST00000489554 CBLCQ9ULV8 474 aa9.6□□□□□ -0.87
SCAMP4-208ENST00000489554 CHST2Q9Y4C5 530 aa9.6□□□□□ -0.87
SCAMP4-208ENST00000489554 FAM215AQ9Y5M1 114 aa9.6□□□□□ -0.87
SCAMP4-208ENST00000489554 SNX13Q9Y5W8 968 aa9.6□□□□□ -0.87
SCAMP4-208ENST00000489554 PCNX1Q96RV3 2341 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms