RNA–Protein interactions for RNA: ENST00000489352.5

HDAC6-233, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-233ENST00000489352 GRHL2Q6ISB3 625 aa9.97□□□□□ -0.81
HDAC6-233ENST00000489352 PAGE2Q7Z2X7 111 aa9.97□□□□□ -0.81
HDAC6-233ENST00000489352 CARM1Q86X55 608 aa9.97□□□□□ -0.81
HDAC6-233ENST00000489352 SYCE1Q8N0S2 351 aa9.97□□□□□ -0.81
HDAC6-233ENST00000489352 C17orf78Q8N4C9 275 aa9.97□□□□□ -0.81
HDAC6-233ENST00000489352 RAB39BQ96DA2 213 aa9.97□□□□□ -0.81
HDAC6-233ENST00000489352 ERP27Q96DN0 273 aa9.97□□□□□ -0.81
HDAC6-233ENST00000489352 C1orf147Q96MC9 270 aaPredicted RBP9.97□□□□□ -0.81
HDAC6-233ENST00000489352 ANKRD27Q96NW4 1050 aa9.97□□□□□ -0.81
HDAC6-233ENST00000489352 BBS4Q96RK4 519 aa9.97□□□□□ -0.81
HDAC6-233ENST00000489352 NPAS1Q99742 590 aa9.97□□□□□ -0.81
HDAC6-233ENST00000489352 SLC30A2Q9BRI3 323 aa9.97□□□□□ -0.81
HDAC6-233ENST00000489352 CD244Q9BZW8 370 aa9.97□□□□□ -0.81
HDAC6-233ENST00000489352 ZNF665Q9H7R5 613 aa9.97□□□□□ -0.81
HDAC6-233ENST00000489352 TCF7L1Q9HCS4 588 aa9.97□□□□□ -0.81
HDAC6-233ENST00000489352 SLC17A5Q9NRA2 495 aa9.97□□□□□ -0.81
HDAC6-233ENST00000489352 MED17Q9NVC6 651 aa9.97□□□□□ -0.81
HDAC6-233ENST00000489352 OXSMQ9NWU1 459 aa9.97□□□□□ -0.81
HDAC6-233ENST00000489352 AHSPQ9NZD4 102 aa9.97□□□□□ -0.81
HDAC6-233ENST00000489352 NUP50Q9UKX7 468 aa9.97□□□□□ -0.81
HDAC6-233ENST00000489352 NOSIPQ9Y314 301 aaKnown RBP9.97□□□□□ -0.81
HDAC6-233ENST00000489352 WNT9BO14905 357 aa9.96□□□□□ -0.82
HDAC6-233ENST00000489352 PIP5K1BO14986 540 aa9.96□□□□□ -0.82
HDAC6-233ENST00000489352 MFAP3LO75121 409 aa9.96□□□□□ -0.82
HDAC6-233ENST00000489352 UTS2O95399 124 aa9.96□□□□□ -0.82
HDAC6-233ENST00000489352 EPORP19235 508 aa9.96□□□□□ -0.82
HDAC6-233ENST00000489352 NPR2P20594 1047 aa9.96□□□□□ -0.82
HDAC6-233ENST00000489352 ACHEP22303 614 aa9.96□□□□□ -0.82
HDAC6-233ENST00000489352 PSMA4P25789 261 aaKnown RBP9.96□□□□□ -0.82
HDAC6-233ENST00000489352 MAPK12P53778 367 aa9.96□□□□□ -0.82
HDAC6-233ENST00000489352 RAG2P55895 527 aa9.96□□□□□ -0.82
HDAC6-233ENST00000489352 RAC3P60763 192 aa9.96□□□□□ -0.82
HDAC6-233ENST00000489352 PRR5P85299 388 aa9.96□□□□□ -0.82
HDAC6-233ENST00000489352 C2orf68Q2NKX9 166 aa9.96□□□□□ -0.82
HDAC6-233ENST00000489352 SLC9B1Q4ZJI4 515 aa9.96□□□□□ -0.82
HDAC6-233ENST00000489352 KPRPQ5T749 579 aaPredicted RBP9.96□□□□□ -0.82
HDAC6-233ENST00000489352 C1QTNF12Q5T7M4 302 aa9.96□□□□□ -0.82
HDAC6-233ENST00000489352 REP15Q6BDI9 236 aa9.96□□□□□ -0.82
HDAC6-233ENST00000489352 C11orf87Q6NUJ2 197 aa9.96□□□□□ -0.82
HDAC6-233ENST00000489352 FAM180BQ6P0A1 224 aa9.96□□□□□ -0.82
HDAC6-233ENST00000489352 LRRC70Q7Z2Q7 622 aa9.96□□□□□ -0.82
HDAC6-233ENST00000489352 GAS2L3Q86XJ1 694 aa9.96□□□□□ -0.82
HDAC6-233ENST00000489352 RIBC1Q8N443 379 aaPredicted RBP9.96□□□□□ -0.82
HDAC6-233ENST00000489352 WDR31Q8NA23 367 aa9.96□□□□□ -0.82
HDAC6-233ENST00000489352 ACTRT2Q8TDY3 377 aa9.96□□□□□ -0.82
HDAC6-233ENST00000489352 CKAP2Q8WWK9 683 aa9.96□□□□□ -0.82
HDAC6-233ENST00000489352 RDH5Q92781 318 aa9.96□□□□□ -0.82
HDAC6-233ENST00000489352 RACGAP1Q9H0H5 632 aa9.96□□□□□ -0.82
HDAC6-233ENST00000489352 LMBRD1Q9NUN5 540 aa9.96□□□□□ -0.82
HDAC6-233ENST00000489352 OPTCQ9UBM4 332 aa9.96□□□□□ -0.82
HDAC6-233ENST00000489352 UPB1Q9UBR1 384 aa9.96□□□□□ -0.82
HDAC6-233ENST00000489352 ANGPTL3Q9Y5C1 460 aa9.96□□□□□ -0.82
HDAC6-233ENST00000489352 PCDHA9Q9Y5H5 950 aa9.96□□□□□ -0.82
HDAC6-233ENST00000489352 ARHGAP32A7KAX9 2087 aa9.95□□□□□ -0.82
HDAC6-233ENST00000489352 CYTIPO60759 359 aa9.95□□□□□ -0.82
HDAC6-233ENST00000489352 IPO7O95373 1038 aaKnown RBP9.95□□□□□ -0.82
HDAC6-233ENST00000489352 ELK4P28324 431 aa9.95□□□□□ -0.82
HDAC6-233ENST00000489352 SHC1P29353 583 aa9.95□□□□□ -0.82
HDAC6-233ENST00000489352 MTNR1AP48039 350 aa9.95□□□□□ -0.82
HDAC6-233ENST00000489352 E2F2Q14209 437 aa9.95□□□□□ -0.82
HDAC6-233ENST00000489352 ZNF460Q14592 562 aa9.95□□□□□ -0.82
HDAC6-233ENST00000489352 CRYMQ14894 314 aa9.95□□□□□ -0.82
HDAC6-233ENST00000489352 TRIP13Q15645 432 aaPredicted RBP9.95□□□□□ -0.82
HDAC6-233ENST00000489352 CCNG2Q16589 344 aa9.95□□□□□ -0.82
HDAC6-233ENST00000489352 GALNT7Q86SF2 657 aa9.95□□□□□ -0.82
HDAC6-233ENST00000489352 CNGA4Q8IV77 575 aa9.95□□□□□ -0.82
HDAC6-233ENST00000489352 OR4F15Q8NGB8 312 aa9.95□□□□□ -0.82
HDAC6-233ENST00000489352 ZNF675Q8TD23 568 aa9.95□□□□□ -0.82
HDAC6-233ENST00000489352 ZFP90Q8TF47 636 aa9.95□□□□□ -0.82
HDAC6-233ENST00000489352 SGCDQ92629 289 aa9.95□□□□□ -0.82
HDAC6-233ENST00000489352 EXT2Q93063 718 aa9.95□□□□□ -0.82
HDAC6-233ENST00000489352 PPP1R14AQ96A00 147 aa9.95□□□□□ -0.82
HDAC6-233ENST00000489352 SH3YL1Q96HL8 342 aaPredicted RBP9.95□□□□□ -0.82
HDAC6-233ENST00000489352 ARL5BQ96KC2 179 aa9.95□□□□□ -0.82
HDAC6-233ENST00000489352 SLC38A2Q96QD8 506 aa9.95□□□□□ -0.82
HDAC6-233ENST00000489352 DOK1Q99704 481 aa9.95□□□□□ -0.82
HDAC6-233ENST00000489352 KATNB1Q9BVA0 655 aa9.95□□□□□ -0.82
HDAC6-233ENST00000489352 ZNF416Q9BWM5 594 aa9.95□□□□□ -0.82
HDAC6-233ENST00000489352 FAIM2Q9BWQ8 316 aa9.95□□□□□ -0.82
HDAC6-233ENST00000489352 MS4A7Q9GZW8 240 aaPredicted RBP9.95□□□□□ -0.82
HDAC6-233ENST00000489352 Q9N2J8 555 aa9.95□□□□□ -0.82
HDAC6-233ENST00000489352 PLEK2Q9NYT0 353 aa9.95□□□□□ -0.82
HDAC6-233ENST00000489352 ZNF69Q9UC07 566 aa9.95□□□□□ -0.82
HDAC6-233ENST00000489352 CES1P1Q9UKY3 287 aa9.95□□□□□ -0.82
HDAC6-233ENST00000489352 ICAM5Q9UMF0 924 aa9.95□□□□□ -0.82
HDAC6-233ENST00000489352 CLPSL1A2RUU4 121 aa9.94□□□□□ -0.82
HDAC6-233ENST00000489352 ZNF195O14628 629 aa9.94□□□□□ -0.82
HDAC6-233ENST00000489352 KLF11O14901 512 aa9.94□□□□□ -0.82
HDAC6-233ENST00000489352 MRPL33O75394 65 aaKnown RBP9.94□□□□□ -0.82
HDAC6-233ENST00000489352 SEC14L2O76054 403 aa9.94□□□□□ -0.82
HDAC6-233ENST00000489352 NUDT14O95848 222 aa9.94□□□□□ -0.82
HDAC6-233ENST00000489352 NGFP01138 241 aa9.94□□□□□ -0.82
HDAC6-233ENST00000489352 CSF1P09603 554 aa9.94□□□□□ -0.82
HDAC6-233ENST00000489352 LTA4HP09960 611 aaKnown RBP9.94□□□□□ -0.82
HDAC6-233ENST00000489352 HPGDP15428 266 aa9.94□□□□□ -0.82
HDAC6-233ENST00000489352 PGAM1P18669 254 aa9.94□□□□□ -0.82
HDAC6-233ENST00000489352 COL8A2P25067 703 aa9.94□□□□□ -0.82
HDAC6-233ENST00000489352 SLC12A2P55011 1212 aa9.94□□□□□ -0.82
HDAC6-233ENST00000489352 SLC18A2Q05940 514 aa9.94□□□□□ -0.82
HDAC6-233ENST00000489352 R3HCC1LQ7Z5L2 792 aaKnown RBP9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms