RNA–Protein interactions for RNA: ENST00000488013.1

HDLBP-242, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 651 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-242ENST00000488013 NDUFAF4Q9P032 175 aa10.09□□□□□ -0.79
HDLBP-242ENST00000488013 RPS6KB2Q9UBS0 482 aa10.09□□□□□ -0.79
HDLBP-242ENST00000488013 DNAJB9Q9UBS3 223 aa10.09□□□□□ -0.79
HDLBP-242ENST00000488013 ICAM5Q9UMF0 924 aa10.09□□□□□ -0.79
HDLBP-242ENST00000488013 V9GYQ6 96 aa10.09□□□□□ -0.79
HDLBP-242ENST00000488013 URB1O60287 2271 aaKnown RBP10.09□□□□□ -0.79
HDLBP-242ENST00000488013 FREM2Q5SZK8 3169 aa10.08□□□□□ -0.8
HDLBP-242ENST00000488013 NUP214P35658 2090 aaPredicted RBP10.08□□□□□ -0.8
HDLBP-242ENST00000488013 CENPVL1A0A0U1RR11 272 aa10.08□□□□□ -0.8
HDLBP-242ENST00000488013 ANKUB1A6NFN9 424 aa10.08□□□□□ -0.8
HDLBP-242ENST00000488013 LINC01387J3KSC0 135 aa10.08□□□□□ -0.8
HDLBP-242ENST00000488013 TAF4O00268 1085 aa10.08□□□□□ -0.8
HDLBP-242ENST00000488013 CLOCKO15516 846 aa10.08□□□□□ -0.8
HDLBP-242ENST00000488013 NME2P1O60361 137 aa10.08□□□□□ -0.8
HDLBP-242ENST00000488013 CYP7B1O75881 506 aa10.08□□□□□ -0.8
HDLBP-242ENST00000488013 CST1P01037 141 aa10.08□□□□□ -0.8
HDLBP-242ENST00000488013 SP1P08047 785 aa10.08□□□□□ -0.8
HDLBP-242ENST00000488013 CCL3P10147 92 aa10.08□□□□□ -0.8
HDLBP-242ENST00000488013 PNMTP11086 282 aa10.08□□□□□ -0.8
HDLBP-242ENST00000488013 NME2P22392 152 aa10.08□□□□□ -0.8
HDLBP-242ENST00000488013 ADH6P28332 368 aa10.08□□□□□ -0.8
HDLBP-242ENST00000488013 ZNF41P51814 821 aaPredicted RBP10.08□□□□□ -0.8
HDLBP-242ENST00000488013 TAS2R41P59536 307 aa10.08□□□□□ -0.8
HDLBP-242ENST00000488013 EPS8Q12929 822 aa10.08□□□□□ -0.8
HDLBP-242ENST00000488013 RAPSNQ13702 412 aa10.08□□□□□ -0.8
HDLBP-242ENST00000488013 CD226Q15762 336 aa10.08□□□□□ -0.8
HDLBP-242ENST00000488013 ATP6AP1Q15904 470 aa10.08□□□□□ -0.8
HDLBP-242ENST00000488013 GLYR1Q49A26 553 aaPredicted RBP10.08□□□□□ -0.8
HDLBP-242ENST00000488013 COLEC12Q5KU26 742 aa10.08□□□□□ -0.8
HDLBP-242ENST00000488013 ZNF468Q5VIY5 522 aaPredicted RBP10.08□□□□□ -0.8
HDLBP-242ENST00000488013 WBP2NLQ6ICG8 309 aa10.08□□□□□ -0.8
HDLBP-242ENST00000488013 SPINK14Q6IE38 97 aa10.08□□□□□ -0.8
HDLBP-242ENST00000488013 OR2T5Q6IEZ7 315 aa10.08□□□□□ -0.8
HDLBP-242ENST00000488013 ULK3Q6PHR2 472 aa10.08□□□□□ -0.8
HDLBP-242ENST00000488013 APOOLQ6UXV4 268 aa10.08□□□□□ -0.8
HDLBP-242ENST00000488013 DEF8Q6ZN54 512 aa10.08□□□□□ -0.8
HDLBP-242ENST00000488013 TMCO5AQ8N6Q1 288 aa10.08□□□□□ -0.8
HDLBP-242ENST00000488013 FAM86B1Q8N7N1 296 aa10.08□□□□□ -0.8
HDLBP-242ENST00000488013 MDS2Q8NDY4 140 aa10.08□□□□□ -0.8
HDLBP-242ENST00000488013 OR6T1Q8NGN1 323 aa10.08□□□□□ -0.8
HDLBP-242ENST00000488013 OR1J4Q8NGS1 313 aa10.08□□□□□ -0.8
HDLBP-242ENST00000488013 OR2T29Q8NH02 315 aa10.08□□□□□ -0.8
HDLBP-242ENST00000488013 ZNF563Q8TA94 476 aa10.08□□□□□ -0.8
HDLBP-242ENST00000488013 PYDC1Q8WXC3 89 aa10.08□□□□□ -0.8
HDLBP-242ENST00000488013 ST8SIA1Q92185 356 aa10.08□□□□□ -0.8
HDLBP-242ENST00000488013 CNOT9Q92600 299 aaKnown RBP10.08□□□□□ -0.8
HDLBP-242ENST00000488013 ZBTB8AQ96BR9 441 aa10.08□□□□□ -0.8
HDLBP-242ENST00000488013 NTNG2Q96CW9 530 aa10.08□□□□□ -0.8
HDLBP-242ENST00000488013 NRBF2Q96F24 287 aa10.08□□□□□ -0.8
HDLBP-242ENST00000488013 SCMH1Q96GD3 660 aa10.08□□□□□ -0.8
HDLBP-242ENST00000488013 CENPNQ96H22 339 aaPredicted RBP10.08□□□□□ -0.8
HDLBP-242ENST00000488013 MCHR1Q99705 422 aa10.08□□□□□ -0.8
HDLBP-242ENST00000488013 ARHGAP9Q9BRR9 750 aa10.08□□□□□ -0.8
HDLBP-242ENST00000488013 FNDC11Q9BVV2 318 aa10.08□□□□□ -0.8
HDLBP-242ENST00000488013 REEP1Q9H902 201 aa10.08□□□□□ -0.8
HDLBP-242ENST00000488013 ZFP64Q9NPA5 681 aa10.08□□□□□ -0.8
HDLBP-242ENST00000488013 C8orf4Q9NR00 106 aa10.08□□□□□ -0.8
HDLBP-242ENST00000488013 ANKRD10Q9NXR5 420 aa10.08□□□□□ -0.8
HDLBP-242ENST00000488013 QPCTLQ9NXS2 382 aa10.08□□□□□ -0.8
HDLBP-242ENST00000488013 FLRT3Q9NZU0 649 aa10.08□□□□□ -0.8
HDLBP-242ENST00000488013 STX18Q9P2W9 335 aaKnown RBP10.08□□□□□ -0.8
HDLBP-242ENST00000488013 CARD8Q9Y2G2 431 aa10.08□□□□□ -0.8
HDLBP-242ENST00000488013 MRPS18CQ9Y3D5 142 aaKnown RBP10.08□□□□□ -0.8
HDLBP-242ENST00000488013 CHST2Q9Y4C5 530 aa10.08□□□□□ -0.8
HDLBP-242ENST00000488013 CHD8Q9HCK8 2581 aa10.08□□□□□ -0.8
HDLBP-242ENST00000488013 A0A1W2PRQ8 180 aa10.07□□□□□ -0.8
HDLBP-242ENST00000488013 TRAPPC13A5PLN9 417 aa10.07□□□□□ -0.8
HDLBP-242ENST00000488013 CLDN24A6NM45 220 aa10.07□□□□□ -0.8
HDLBP-242ENST00000488013 M0R3H8 397 aa10.07□□□□□ -0.8
HDLBP-242ENST00000488013 CDC40O60508 579 aaKnown RBP eCLIP10.07□□□□□ -0.8
HDLBP-242ENST00000488013 TRIM3O75382 744 aaPredicted RBP10.07□□□□□ -0.8
HDLBP-242ENST00000488013 NUDT14O95848 222 aa10.07□□□□□ -0.8
HDLBP-242ENST00000488013 H1F0P07305 194 aaKnown RBP10.07□□□□□ -0.8
HDLBP-242ENST00000488013 GCKP35557 465 aa10.07□□□□□ -0.8
HDLBP-242ENST00000488013 IFNGR2P38484 337 aa10.07□□□□□ -0.8
HDLBP-242ENST00000488013 PTGDSP41222 190 aa10.07□□□□□ -0.8
HDLBP-242ENST00000488013 ACAA2P42765 397 aaKnown RBP10.07□□□□□ -0.8
HDLBP-242ENST00000488013 SLC1A3P43003 542 aa10.07□□□□□ -0.8
HDLBP-242ENST00000488013 OR1E2P47887 323 aa10.07□□□□□ -0.8
HDLBP-242ENST00000488013 CCR4P51679 360 aa10.07□□□□□ -0.8
HDLBP-242ENST00000488013 HMGA2P52926 109 aa10.07□□□□□ -0.8
HDLBP-242ENST00000488013 DLX5P56178 289 aa10.07□□□□□ -0.8
HDLBP-242ENST00000488013 DSCR4P56555 118 aaPredicted RBP10.07□□□□□ -0.8
HDLBP-242ENST00000488013 ZNF117Q03924 483 aa10.07□□□□□ -0.8
HDLBP-242ENST00000488013 DGCR6Q14129 220 aa10.07□□□□□ -0.8
HDLBP-242ENST00000488013 INAQ16352 499 aa10.07□□□□□ -0.8
HDLBP-242ENST00000488013 COL28A1Q2UY09 1125 aa10.07□□□□□ -0.8
HDLBP-242ENST00000488013 GLIPR1L2Q4G1C9 344 aa10.07□□□□□ -0.8
HDLBP-242ENST00000488013 ZNF766Q5HY98 468 aa10.07□□□□□ -0.8
HDLBP-242ENST00000488013 PLEKHM3Q6ZWE6 761 aa10.07□□□□□ -0.8
HDLBP-242ENST00000488013 MDGA2Q7Z553 956 aa10.07□□□□□ -0.8
HDLBP-242ENST00000488013 HMGN2P46Q86SG4 172 aa10.07□□□□□ -0.8
HDLBP-242ENST00000488013 SLC22A16Q86VW1 577 aa10.07□□□□□ -0.8
HDLBP-242ENST00000488013 OFCC1Q8IZS5 231 aa10.07□□□□□ -0.8
HDLBP-242ENST00000488013 PQLC1Q8N2U9 271 aa10.07□□□□□ -0.8
HDLBP-242ENST00000488013 FADS6Q8N9I5 356 aa10.07□□□□□ -0.8
HDLBP-242ENST00000488013 GATSQ8NAP1 163 aa10.07□□□□□ -0.8
HDLBP-242ENST00000488013 VANGL1Q8TAA9 524 aaPredicted RBP10.07□□□□□ -0.8
HDLBP-242ENST00000488013 PHF10Q8WUB8 498 aaKnown RBP10.07□□□□□ -0.8
HDLBP-242ENST00000488013 SLCO4A1Q96BD0 722 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms