RNA–Protein interactions for RNA: ENST00000487160.1

PRPF38A-203, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 2

Gene PRPF38A, Length 926 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-203ENST00000487160 ELP6Q0PNE2 266 aa3.9□□□□□ -1.79
PRPF38A-203ENST00000487160 UBE2V2Q15819 145 aa3.9□□□□□ -1.79
PRPF38A-203ENST00000487160 DCAF4L1Q3SXM0 396 aa3.9□□□□□ -1.79
PRPF38A-203ENST00000487160 SEL1L3Q68CR1 1132 aa3.9□□□□□ -1.79
PRPF38A-203ENST00000487160 CBLN3Q6UW01 205 aa3.9□□□□□ -1.79
PRPF38A-203ENST00000487160 ARMCX2Q7L311 632 aa3.9□□□□□ -1.79
PRPF38A-203ENST00000487160 HIPK1Q86Z02 1210 aa3.9□□□□□ -1.79
PRPF38A-203ENST00000487160 SLC22A18ASQ8N1D0 253 aa3.9□□□□□ -1.79
PRPF38A-203ENST00000487160 POM121L12Q8N7R1 296 aa3.9□□□□□ -1.79
PRPF38A-203ENST00000487160 STKLD1Q8NE28 680 aa3.9□□□□□ -1.79
PRPF38A-203ENST00000487160 IPMKQ8NFU5 416 aa3.9□□□□□ -1.79
PRPF38A-203ENST00000487160 FNDC8Q8TC99 324 aa3.9□□□□□ -1.79
PRPF38A-203ENST00000487160 TOMM40LQ969M1 308 aa3.9□□□□□ -1.79
PRPF38A-203ENST00000487160 TADA1Q96BN2 335 aa3.9□□□□□ -1.79
PRPF38A-203ENST00000487160 PIWIL1Q96J94 861 aaKnown RBP3.9□□□□□ -1.79
PRPF38A-203ENST00000487160 PSMB7Q99436 277 aa3.9□□□□□ -1.79
PRPF38A-203ENST00000487160 WDR76Q9H967 626 aa3.9□□□□□ -1.79
PRPF38A-203ENST00000487160 COG4Q9H9E3 785 aa3.9□□□□□ -1.79
PRPF38A-203ENST00000487160 GPN2Q9H9Y4 310 aaPredicted RBP3.9□□□□□ -1.79
PRPF38A-203ENST00000487160 CALHM2Q9HA72 323 aa3.9□□□□□ -1.79
PRPF38A-203ENST00000487160 RBM28Q9NW13 759 aaKnown RBP3.9□□□□□ -1.79
PRPF38A-203ENST00000487160 RDH8Q9NYR8 311 aa3.9□□□□□ -1.79
PRPF38A-203ENST00000487160 TBK1Q9UHD2 729 aa3.9□□□□□ -1.79
PRPF38A-203ENST00000487160 AP4B1Q9Y6B7 739 aa3.9□□□□□ -1.79
PRPF38A-203ENST00000487160 COL1A1P02452 1464 aaPredicted RBP3.9□□□□□ -1.79
PRPF38A-203ENST00000487160 FRMPD3Q5JV73 1810 aa3.9□□□□□ -1.79
PRPF38A-203ENST00000487160 SRRM5B3KS81 715 aa3.89□□□□□ -1.79
PRPF38A-203ENST00000487160 CPLX1O14810 134 aa3.89□□□□□ -1.79
PRPF38A-203ENST00000487160 MAPK13O15264 365 aa3.89□□□□□ -1.79
PRPF38A-203ENST00000487160 TM9SF1O15321 606 aa3.89□□□□□ -1.79
PRPF38A-203ENST00000487160 SH3BGRLO75368 114 aa3.89□□□□□ -1.79
PRPF38A-203ENST00000487160 CRLF1O75462 422 aa3.89□□□□□ -1.79
PRPF38A-203ENST00000487160 UFL1O94874 794 aa3.89□□□□□ -1.79
PRPF38A-203ENST00000487160 PCCBP05166 539 aa3.89□□□□□ -1.79
PRPF38A-203ENST00000487160 EPB41P11171 864 aaKnown RBP3.89□□□□□ -1.79
PRPF38A-203ENST00000487160 ELK3P41970 407 aa3.89□□□□□ -1.79
PRPF38A-203ENST00000487160 METAP1P53582 386 aa3.89□□□□□ -1.79
PRPF38A-203ENST00000487160 HMGCS2P54868 508 aa3.89□□□□□ -1.79
PRPF38A-203ENST00000487160 RPS6P62753 249 aaKnown RBP3.89□□□□□ -1.79
PRPF38A-203ENST00000487160 TAF7Q15545 349 aaPredicted RBP3.89□□□□□ -1.79
PRPF38A-203ENST00000487160 SLX4IPQ5VYV7 408 aa3.89□□□□□ -1.79
PRPF38A-203ENST00000487160 SLC25A24Q6NUK1 477 aa3.89□□□□□ -1.79
PRPF38A-203ENST00000487160 CENPUQ71F23 418 aa3.89□□□□□ -1.79
PRPF38A-203ENST00000487160 FGFRL1Q8N441 504 aa3.89□□□□□ -1.79
PRPF38A-203ENST00000487160 DEFB123Q8N688 67 aa3.89□□□□□ -1.79
PRPF38A-203ENST00000487160 OR10T2Q8NGX3 314 aa3.89□□□□□ -1.79
PRPF38A-203ENST00000487160 TBCKQ8TEA7 893 aa3.89□□□□□ -1.79
PRPF38A-203ENST00000487160 UPRTQ96BW1 309 aa3.89□□□□□ -1.79
PRPF38A-203ENST00000487160 DHTKD1Q96HY7 919 aaPredicted RBP3.89□□□□□ -1.79
PRPF38A-203ENST00000487160 TPPP3Q9BW30 176 aa3.89□□□□□ -1.79
PRPF38A-203ENST00000487160 GSDMCQ9BYG8 508 aa3.89□□□□□ -1.79
PRPF38A-203ENST00000487160 PUS3Q9BZE2 481 aaKnown RBP3.89□□□□□ -1.79
PRPF38A-203ENST00000487160 ZBP1Q9H171 429 aa3.89□□□□□ -1.79
PRPF38A-203ENST00000487160 PNNQ9H307 717 aaKnown RBP3.89□□□□□ -1.79
PRPF38A-203ENST00000487160 RIBC2Q9H4K1 309 aa3.89□□□□□ -1.79
PRPF38A-203ENST00000487160 MEPEQ9NQ76 525 aaPredicted RBP3.89□□□□□ -1.79
PRPF38A-203ENST00000487160 UTP6Q9NYH9 597 aaKnown RBP3.89□□□□□ -1.79
PRPF38A-203ENST00000487160 PRODH2Q9UF12 536 aa3.89□□□□□ -1.79
PRPF38A-203ENST00000487160 CHRNA9Q9UGM1 479 aa3.89□□□□□ -1.79
PRPF38A-203ENST00000487160 TRMT112Q9UI30 125 aaKnown RBP3.89□□□□□ -1.79
PRPF38A-203ENST00000487160 MUC3AQ02505 3323 aa3.89□□□□□ -1.79
PRPF38A-203ENST00000487160 GRIN2DO15399 1336 aa3.89□□□□□ -1.79
PRPF38A-203ENST00000487160 SH3TC1Q8TE82 1336 aa3.89□□□□□ -1.79
PRPF38A-203ENST00000487160 MAST2Q6P0Q8 1798 aa3.89□□□□□ -1.79
PRPF38A-203ENST00000487160 PTPRFP10586 1907 aa3.88□□□□□ -1.79
PRPF38A-203ENST00000487160 MYH13Q9UKX3 1938 aa3.88□□□□□ -1.79
PRPF38A-203ENST00000487160 TRAV9-2A0A087WT02 112 aa3.88□□□□□ -1.79
PRPF38A-203ENST00000487160 TRBV7-9A0A0J9YWB2 115 aa3.88□□□□□ -1.79
PRPF38A-203ENST00000487160 CCT8L1PA6NM43 557 aa3.88□□□□□ -1.79
PRPF38A-203ENST00000487160 SAP18O00422 153 aaKnown RBP3.88□□□□□ -1.79
PRPF38A-203ENST00000487160 PPIHO43447 177 aaKnown RBP3.88□□□□□ -1.79
PRPF38A-203ENST00000487160 JAK2O60674 1132 aa3.88□□□□□ -1.79
PRPF38A-203ENST00000487160 SRPX2O60687 465 aaPredicted RBP3.88□□□□□ -1.79
PRPF38A-203ENST00000487160 IGFBP1P08833 259 aaPredicted RBP3.88□□□□□ -1.79
PRPF38A-203ENST00000487160 FOLR2P14207 255 aa3.88□□□□□ -1.79
PRPF38A-203ENST00000487160 LPAL2Q16609 132 aa3.88□□□□□ -1.79
PRPF38A-203ENST00000487160 LINC01620Q4KN68 170 aa3.88□□□□□ -1.79
PRPF38A-203ENST00000487160 CYBRD1Q53TN4 286 aa3.88□□□□□ -1.79
PRPF38A-203ENST00000487160 NCR3LG1Q68D85 454 aa3.88□□□□□ -1.79
PRPF38A-203ENST00000487160 CCBE1Q6UXH8 406 aaPredicted RBP3.88□□□□□ -1.79
PRPF38A-203ENST00000487160 TMEM184AQ6ZMB5 413 aa3.88□□□□□ -1.79
PRPF38A-203ENST00000487160 GTSCR1Q86UQ5 136 aa3.88□□□□□ -1.79
PRPF38A-203ENST00000487160 THRSPQ92748 146 aa3.88□□□□□ -1.79
PRPF38A-203ENST00000487160 RAB7BQ96AH8 199 aa3.88□□□□□ -1.79
PRPF38A-203ENST00000487160 C4orf36Q96KX1 117 aa3.88□□□□□ -1.79
PRPF38A-203ENST00000487160 NAP1L5Q96NT1 182 aaPredicted RBP3.88□□□□□ -1.79
PRPF38A-203ENST00000487160 MCCC1Q96RQ3 725 aaPredicted RBP3.88□□□□□ -1.79
PRPF38A-203ENST00000487160 DHX33Q9H6R0 707 aaKnown RBP3.88□□□□□ -1.79
PRPF38A-203ENST00000487160 SDAD1Q9NVU7 687 aaKnown RBP eCLIP3.88□□□□□ -1.79
PRPF38A-203ENST00000487160 BARX2Q9UMQ3 279 aaPredicted RBP3.88□□□□□ -1.79
PRPF38A-203ENST00000487160 LTBP2Q14767 1821 aa3.88□□□□□ -1.79
PRPF38A-203ENST00000487160 DOCK3Q8IZD9 2030 aa3.87□□□□□ -1.79
PRPF38A-203ENST00000487160 CDH23Q9H251 3354 aa3.87□□□□□ -1.79
PRPF38A-203ENST00000487160 E9PAM4 449 aa3.87□□□□□ -1.79
PRPF38A-203ENST00000487160 ZNF253O75346 499 aa3.87□□□□□ -1.79
PRPF38A-203ENST00000487160 JCHAINP01591 159 aa3.87□□□□□ -1.79
PRPF38A-203ENST00000487160 PIGRP01833 764 aa3.87□□□□□ -1.79
PRPF38A-203ENST00000487160 CHRNA1P02708 482 aa3.87□□□□□ -1.79
PRPF38A-203ENST00000487160 CSF2P04141 144 aa3.87□□□□□ -1.79
PRPF38A-203ENST00000487160 ASNSP08243 561 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms