RNA–Protein interactions for RNA: ENST00000486828.6

PDLIM7-207, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-207ENST00000486828 TMEM27Q9HBJ8 222 aa16.64■□□□□ 0.26
PDLIM7-207ENST00000486828 FAM60AQ9NP50 221 aa16.64■□□□□ 0.26
PDLIM7-207ENST00000486828 NPAP1Q9NZP6 1156 aa16.64■□□□□ 0.26
PDLIM7-207ENST00000486828 GRIP1Q9Y3R0 1128 aa16.64■□□□□ 0.26
PDLIM7-207ENST00000486828 OR10H2O60403 315 aa16.64■□□□□ 0.25
PDLIM7-207ENST00000486828 SOX30O94993 753 aa16.64■□□□□ 0.25
PDLIM7-207ENST00000486828 ST6GAL1P15907 406 aa16.64■□□□□ 0.25
PDLIM7-207ENST00000486828 RFX2P48378 723 aa16.64■□□□□ 0.25
PDLIM7-207ENST00000486828 CTBP2P56545 445 aa16.64■□□□□ 0.25
PDLIM7-207ENST00000486828 HHEXQ03014 270 aa16.64■□□□□ 0.25
PDLIM7-207ENST00000486828 SCN1BQ07699 218 aa16.64■□□□□ 0.25
PDLIM7-207ENST00000486828 SMAD4Q13485 552 aaKnown RBP16.64■□□□□ 0.25
PDLIM7-207ENST00000486828 CCINQ13939 588 aa16.64■□□□□ 0.25
PDLIM7-207ENST00000486828 FZD2Q14332 565 aa16.64■□□□□ 0.25
PDLIM7-207ENST00000486828 AGAP6Q5VW22 663 aa16.64■□□□□ 0.25
PDLIM7-207ENST00000486828 VASNQ6EMK4 673 aa16.64■□□□□ 0.25
PDLIM7-207ENST00000486828 ARMC6Q6NXE6 501 aa16.64■□□□□ 0.25
PDLIM7-207ENST00000486828 BMP8AQ7Z5Y6 402 aa16.64■□□□□ 0.25
PDLIM7-207ENST00000486828 KLBQ86Z14 1044 aa16.64■□□□□ 0.25
PDLIM7-207ENST00000486828 ARHGEF39Q8N4T4 335 aa16.64■□□□□ 0.25
PDLIM7-207ENST00000486828 ACBD7Q8N6N7 88 aa16.64■□□□□ 0.25
PDLIM7-207ENST00000486828 FRMD1Q8N878 549 aa16.64■□□□□ 0.25
PDLIM7-207ENST00000486828 ATP6V1C2Q8NEY4 427 aa16.64■□□□□ 0.25
PDLIM7-207ENST00000486828 OR13C2Q8NGS9 318 aa16.64■□□□□ 0.25
PDLIM7-207ENST00000486828 OR9A4Q8NGU2 314 aa16.64■□□□□ 0.25
PDLIM7-207ENST00000486828 MAFAQ8NHW3 353 aaPredicted RBP16.64■□□□□ 0.25
PDLIM7-207ENST00000486828 AGAP4Q96P64 663 aa16.64■□□□□ 0.25
PDLIM7-207ENST00000486828 HDHD5Q9BXW7 423 aa16.64■□□□□ 0.25
PDLIM7-207ENST00000486828 SEMA6CQ9H3T2 930 aa16.64■□□□□ 0.25
PDLIM7-207ENST00000486828 MED20Q9H944 212 aa16.64■□□□□ 0.25
PDLIM7-207ENST00000486828 CMC2Q9NRP2 79 aa16.64■□□□□ 0.25
PDLIM7-207ENST00000486828 POMT2Q9UKY4 750 aa16.64■□□□□ 0.25
PDLIM7-207ENST00000486828 POLHQ9Y253 713 aa16.64■□□□□ 0.25
PDLIM7-207ENST00000486828 SIGLEC7Q9Y286 467 aa16.64■□□□□ 0.25
PDLIM7-207ENST00000486828 FAM86C2PA6NEL3 165 aa16.63■□□□□ 0.25
PDLIM7-207ENST00000486828 C12orf71A8MTZ7 269 aa16.63■□□□□ 0.25
PDLIM7-207ENST00000486828 GUSBP08236 651 aa16.63■□□□□ 0.25
PDLIM7-207ENST00000486828 GALP22466 123 aa16.63■□□□□ 0.25
PDLIM7-207ENST00000486828 CAV3P56539 151 aa16.63■□□□□ 0.25
PDLIM7-207ENST00000486828 OR2B6P58173 313 aa16.63■□□□□ 0.25
PDLIM7-207ENST00000486828 PPP3R1P63098 170 aa16.63■□□□□ 0.25
PDLIM7-207ENST00000486828 GPR50Q13585 617 aa16.63■□□□□ 0.25
PDLIM7-207ENST00000486828 SLC35F1Q5T1Q4 408 aa16.63■□□□□ 0.25
PDLIM7-207ENST00000486828 SMARCD3Q6STE5 483 aa16.63■□□□□ 0.25
PDLIM7-207ENST00000486828 B3GLCTQ6Y288 498 aa16.63■□□□□ 0.25
PDLIM7-207ENST00000486828 THSD4Q6ZMP0 1018 aa16.63■□□□□ 0.25
PDLIM7-207ENST00000486828 NCCRP1Q6ZVX7 275 aaPredicted RBP16.63■□□□□ 0.25
PDLIM7-207ENST00000486828 CNOT9Q92600 299 aaKnown RBP16.63■□□□□ 0.25
PDLIM7-207ENST00000486828 NACC2Q96BF6 587 aa16.63■□□□□ 0.25
PDLIM7-207ENST00000486828 LMF2Q9BU23 707 aaKnown RBP16.63■□□□□ 0.25
PDLIM7-207ENST00000486828 MEPEQ9NQ76 525 aaPredicted RBP16.63■□□□□ 0.25
PDLIM7-207ENST00000486828 GPR27Q9NS67 375 aa16.63■□□□□ 0.25
PDLIM7-207ENST00000486828 A0A0B4J2E0 115 aa16.62■□□□□ 0.25
PDLIM7-207ENST00000486828 A0A1B0GX12 115 aa16.62■□□□□ 0.25
PDLIM7-207ENST00000486828 POLR1CO15160 346 aaPredicted RBP16.62■□□□□ 0.25
PDLIM7-207ENST00000486828 SEC14L5O43304 696 aa16.62■□□□□ 0.25
PDLIM7-207ENST00000486828 MBTPS2O43462 519 aa16.62■□□□□ 0.25
PDLIM7-207ENST00000486828 CHP2O43745 196 aa16.62■□□□□ 0.25
PDLIM7-207ENST00000486828 TMCC2O75069 709 aa16.62■□□□□ 0.25
PDLIM7-207ENST00000486828 IGLV3-19P01714 112 aa16.62■□□□□ 0.25
PDLIM7-207ENST00000486828 THEGLP0DJG4 465 aa16.62■□□□□ 0.25
PDLIM7-207ENST00000486828 CTSEP14091 401 aa16.62■□□□□ 0.25
PDLIM7-207ENST00000486828 TYRP1P17643 537 aa16.62■□□□□ 0.25
PDLIM7-207ENST00000486828 S1PR1P21453 382 aa16.62■□□□□ 0.25
PDLIM7-207ENST00000486828 PSG6Q00889 435 aa16.62■□□□□ 0.25
PDLIM7-207ENST00000486828 FOXK2Q01167 660 aa16.62■□□□□ 0.25
PDLIM7-207ENST00000486828 ASAH1Q13510 395 aa16.62■□□□□ 0.25
PDLIM7-207ENST00000486828 DEFB110Q30KQ9 67 aa16.62■□□□□ 0.25
PDLIM7-207ENST00000486828 PDZK1Q5T2W1 519 aa16.62■□□□□ 0.25
PDLIM7-207ENST00000486828 GRAMD2AQ8IUY3 354 aa16.62■□□□□ 0.25
PDLIM7-207ENST00000486828 NEIL3Q8TAT5 605 aa16.62■□□□□ 0.25
PDLIM7-207ENST00000486828 KISS1RQ969F8 398 aaPredicted RBP16.62■□□□□ 0.25
PDLIM7-207ENST00000486828 NEDD4LQ96PU5 975 aa16.62■□□□□ 0.25
PDLIM7-207ENST00000486828 IFT27Q9BW83 186 aa16.62■□□□□ 0.25
PDLIM7-207ENST00000486828 HCAR1Q9BXC0 346 aa16.62■□□□□ 0.25
PDLIM7-207ENST00000486828 ISG20L2Q9H9L3 353 aaKnown RBP16.62■□□□□ 0.25
PDLIM7-207ENST00000486828 ZC3H12DA2A288 527 aaKnown RBP16.62■□□□□ 0.25
PDLIM7-207ENST00000486828 CTSBP07858 339 aa16.62■□□□□ 0.25
PDLIM7-207ENST00000486828 CSF3P09919 207 aa16.62■□□□□ 0.25
PDLIM7-207ENST00000486828 SAGP10523 405 aaPredicted RBP16.62■□□□□ 0.25
PDLIM7-207ENST00000486828 RFX3P48380 749 aa16.62■□□□□ 0.25
PDLIM7-207ENST00000486828 C1orf61Q13536 156 aa16.62■□□□□ 0.25
PDLIM7-207ENST00000486828 ZNHIT3Q15649 155 aaPredicted RBP16.62■□□□□ 0.25
PDLIM7-207ENST00000486828 KCNJ8Q15842 424 aa16.62■□□□□ 0.25
PDLIM7-207ENST00000486828 UBQLNLQ8IYU4 475 aa16.62■□□□□ 0.25
PDLIM7-207ENST00000486828 TMEM99Q8N816 258 aa16.62■□□□□ 0.25
PDLIM7-207ENST00000486828 GRHL3Q8TE85 626 aa16.62■□□□□ 0.25
PDLIM7-207ENST00000486828 EFHD2Q96C19 240 aaPredicted RBP16.62■□□□□ 0.25
PDLIM7-207ENST00000486828 TOE1Q96GM8 510 aaKnown RBP16.62■□□□□ 0.25
PDLIM7-207ENST00000486828 ALG8Q9BVK2 526 aa16.62■□□□□ 0.25
PDLIM7-207ENST00000486828 FOLH1BQ9HBA9 442 aa16.62■□□□□ 0.25
PDLIM7-207ENST00000486828 CAPN10Q9HC96 672 aa16.62■□□□□ 0.25
PDLIM7-207ENST00000486828 PRDM6Q9NQX0 595 aa16.62■□□□□ 0.25
PDLIM7-207ENST00000486828 FLRT3Q9NZU0 649 aa16.62■□□□□ 0.25
PDLIM7-207ENST00000486828 SLC22A31A6NKX4 558 aa16.61■□□□□ 0.25
PDLIM7-207ENST00000486828 SHISA7A6NL88 538 aa16.61■□□□□ 0.25
PDLIM7-207ENST00000486828 PRR23D1E9PI22 279 aaPredicted RBP16.61■□□□□ 0.25
PDLIM7-207ENST00000486828 HCN1O60741 890 aa16.61■□□□□ 0.25
PDLIM7-207ENST00000486828 PTP4A3O75365 173 aa16.61■□□□□ 0.25
PDLIM7-207ENST00000486828 RFPL3O75679 317 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms