RNA–Protein interactions for RNA: ENST00000485080.6

SREBF1-213, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 1,230 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-213ENST00000485080 STOML1Q9UBI4 398 aa16.07■□□□□ 0.16
SREBF1-213ENST00000485080 CAMK2AQ9UQM7 478 aa16.07■□□□□ 0.16
SREBF1-213ENST00000485080 ZNF337Q9Y3M9 751 aa16.07■□□□□ 0.16
SREBF1-213ENST00000485080 KLF2Q9Y5W3 355 aaPredicted RBP16.07■□□□□ 0.16
SREBF1-213ENST00000485080 GPC6Q9Y625 555 aaPredicted RBP16.07■□□□□ 0.16
SREBF1-213ENST00000485080 A0A0G2JPF8 293 aa16.06■□□□□ 0.16
SREBF1-213ENST00000485080 GMNCA6NCL1 334 aa16.06■□□□□ 0.16
SREBF1-213ENST00000485080 TMEM247A6NEH6 219 aa16.06■□□□□ 0.16
SREBF1-213ENST00000485080 BBIP1A8MTZ0 92 aa16.06■□□□□ 0.16
SREBF1-213ENST00000485080 EVPLLA8MZ36 301 aa16.06■□□□□ 0.16
SREBF1-213ENST00000485080 HNRNPCL2B2RXH8 293 aa16.06■□□□□ 0.16
SREBF1-213ENST00000485080 HNRNPCL3B7ZW38 293 aa16.06■□□□□ 0.16
SREBF1-213ENST00000485080 HNRNPCL1O60812 293 aaKnown RBP16.06■□□□□ 0.16
SREBF1-213ENST00000485080 CCDC22O60826 627 aa16.06■□□□□ 0.16
SREBF1-213ENST00000485080 NTN1O95631 604 aa16.06■□□□□ 0.16
SREBF1-213ENST00000485080 CSTAP01040 98 aa16.06■□□□□ 0.16
SREBF1-213ENST00000485080 DBIP07108 87 aaKnown RBP16.06■□□□□ 0.16
SREBF1-213ENST00000485080 HNRNPCL4P0DMR1 293 aa16.06■□□□□ 0.16
SREBF1-213ENST00000485080 DRD4P21917 467 aa16.06■□□□□ 0.16
SREBF1-213ENST00000485080 SEC24CP53992 1094 aa16.06■□□□□ 0.16
SREBF1-213ENST00000485080 EEFSECP57772 596 aaKnown RBP16.06■□□□□ 0.16
SREBF1-213ENST00000485080 KCNJ10P78508 379 aa16.06■□□□□ 0.16
SREBF1-213ENST00000485080 PMPCAQ10713 525 aa16.06■□□□□ 0.16
SREBF1-213ENST00000485080 SEM1Q6ZVN7 128 aa16.06■□□□□ 0.16
SREBF1-213ENST00000485080 MAMDC2Q7Z304 686 aaPredicted RBP16.06■□□□□ 0.16
SREBF1-213ENST00000485080 DHDDSQ86SQ9 333 aa16.06■□□□□ 0.16
SREBF1-213ENST00000485080 ZNF614Q8N883 585 aa16.06■□□□□ 0.16
SREBF1-213ENST00000485080 ASB5Q8WWX0 329 aa16.06■□□□□ 0.16
SREBF1-213ENST00000485080 KLHDC3Q9BQ90 382 aa16.06■□□□□ 0.16
SREBF1-213ENST00000485080 CPPED1Q9BRF8 314 aaPredicted RBP16.06■□□□□ 0.16
SREBF1-213ENST00000485080 IKZF5Q9H5V7 419 aa16.06■□□□□ 0.16
SREBF1-213ENST00000485080 TMEM38AQ9H6F2 299 aa16.06■□□□□ 0.16
SREBF1-213ENST00000485080 ALKBH4Q9NXW9 302 aa16.06■□□□□ 0.16
SREBF1-213ENST00000485080 COQ3Q9NZJ6 369 aa16.06■□□□□ 0.16
SREBF1-213ENST00000485080 VDAC3Q9Y277 283 aa16.06■□□□□ 0.16
SREBF1-213ENST00000485080 MBD3L4A6NDZ8 208 aaPredicted RBP16.05■□□□□ 0.16
SREBF1-213ENST00000485080 MBD3L3A6NE82 208 aaPredicted RBP16.05■□□□□ 0.16
SREBF1-213ENST00000485080 MBD3L5A6NJ08 208 aaPredicted RBP16.05■□□□□ 0.16
SREBF1-213ENST00000485080 FBP2O00757 339 aa16.05■□□□□ 0.16
SREBF1-213ENST00000485080 SNX3O60493 162 aa16.05■□□□□ 0.16
SREBF1-213ENST00000485080 CLDN1O95832 211 aa16.05■□□□□ 0.16
SREBF1-213ENST00000485080 THBS1P07996 1170 aa16.05■□□□□ 0.16
SREBF1-213ENST00000485080 ARAFP10398 606 aa16.05■□□□□ 0.16
SREBF1-213ENST00000485080 NID1P14543 1247 aa16.05■□□□□ 0.16
SREBF1-213ENST00000485080 POU3F2P20265 443 aaPredicted RBP16.05■□□□□ 0.16
SREBF1-213ENST00000485080 ELK4P28324 431 aa16.05■□□□□ 0.16
SREBF1-213ENST00000485080 CHRNB4P30926 498 aa16.05■□□□□ 0.16
SREBF1-213ENST00000485080 CEACAM8P31997 349 aaPredicted RBP16.05■□□□□ 0.16
SREBF1-213ENST00000485080 STARP49675 285 aa16.05■□□□□ 0.16
SREBF1-213ENST00000485080 CLDN15P56746 228 aa16.05■□□□□ 0.16
SREBF1-213ENST00000485080 RAC1P63000 192 aa16.05■□□□□ 0.16
SREBF1-213ENST00000485080 CBFBQ13951 182 aa16.05■□□□□ 0.16
SREBF1-213ENST00000485080 PEX5LQ8IYB4 626 aa16.05■□□□□ 0.16
SREBF1-213ENST00000485080 MBD3L2Q8NHZ7 208 aaPredicted RBP16.05■□□□□ 0.16
SREBF1-213ENST00000485080 POC1BQ8TC44 478 aa16.05■□□□□ 0.16
SREBF1-213ENST00000485080 ST8SIA1Q92185 356 aa16.05■□□□□ 0.16
SREBF1-213ENST00000485080 TMEM19Q96HH6 336 aa16.05■□□□□ 0.16
SREBF1-213ENST00000485080 MRGPRX4Q96LA9 322 aa16.05■□□□□ 0.16
SREBF1-213ENST00000485080 TUBA1CQ9BQE3 449 aa16.05■□□□□ 0.16
SREBF1-213ENST00000485080 NSRP1Q9H0G5 558 aaKnown RBP16.05■□□□□ 0.16
SREBF1-213ENST00000485080 FAM53CQ9NYF3 392 aa16.05■□□□□ 0.16
SREBF1-213ENST00000485080 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.05■□□□□ 0.16
SREBF1-213ENST00000485080 CAPN7Q9Y6W3 813 aa16.05■□□□□ 0.16
SREBF1-213ENST00000485080 INTS1Q8N201 2190 aaKnown RBP16.04■□□□□ 0.16
SREBF1-213ENST00000485080 DOCK7Q96N67 2140 aa16.04■□□□□ 0.16
SREBF1-213ENST00000485080 BCHEP06276 602 aa16.04■□□□□ 0.16
SREBF1-213ENST00000485080 NUDT7P0C024 238 aa16.04■□□□□ 0.16
SREBF1-213ENST00000485080 PRKCAP17252 672 aa16.04■□□□□ 0.16
SREBF1-213ENST00000485080 PLAURQ03405 335 aa16.04■□□□□ 0.16
SREBF1-213ENST00000485080 SF3A3Q12874 501 aaKnown RBP eCLIP16.04■□□□□ 0.162e-9■■■■□ 19.4
SREBF1-213ENST00000485080 NFYCQ13952 458 aa16.04■□□□□ 0.16
SREBF1-213ENST00000485080 ADRM1Q16186 407 aa16.04■□□□□ 0.16
SREBF1-213ENST00000485080 TRMT5Q32P41 509 aaKnown RBP16.04■□□□□ 0.16
SREBF1-213ENST00000485080 NDUFAF6Q330K2 333 aa16.04■□□□□ 0.16
SREBF1-213ENST00000485080 GCNT6Q5T4J0 391 aa16.04■□□□□ 0.16
SREBF1-213ENST00000485080 NCCRP1Q6ZVX7 275 aaPredicted RBP16.04■□□□□ 0.16
SREBF1-213ENST00000485080 GRAMD2AQ8IUY3 354 aa16.04■□□□□ 0.16
SREBF1-213ENST00000485080 C10orf111Q8N326 155 aa16.04■□□□□ 0.16
SREBF1-213ENST00000485080 MEIOBQ8N635 442 aa16.04■□□□□ 0.16
SREBF1-213ENST00000485080 LILRB4Q8NHJ6 448 aa16.04■□□□□ 0.16
SREBF1-213ENST00000485080 WNT2BQ93097 391 aa16.04■□□□□ 0.16
SREBF1-213ENST00000485080 ELAC2Q9BQ52 826 aaKnown RBP16.04■□□□□ 0.16
SREBF1-213ENST00000485080 QRSL1Q9H0R6 528 aaKnown RBP16.04■□□□□ 0.16
SREBF1-213ENST00000485080 PLEKHB1Q9UF11 243 aaPredicted RBP16.04■□□□□ 0.16
SREBF1-213ENST00000485080 RNF6Q9Y252 685 aa16.04■□□□□ 0.16
SREBF1-213ENST00000485080 CRYBG3Q68DQ2 2970 aa16.04■□□□□ 0.16
SREBF1-213ENST00000485080 TNFSF12-TNFSF13A0A0A6YY99 330 aa16.03■□□□□ 0.16
SREBF1-213ENST00000485080 A0A0G2JNJ9 132 aa16.03■□□□□ 0.16
SREBF1-213ENST00000485080 H0Y3Z8 333 aa16.03■□□□□ 0.16
SREBF1-213ENST00000485080 FAAHO00519 579 aa16.03■□□□□ 0.16
SREBF1-213ENST00000485080 ADAMDEC1O15204 470 aa16.03■□□□□ 0.16
SREBF1-213ENST00000485080 GMFGO60234 142 aa16.03■□□□□ 0.16
SREBF1-213ENST00000485080 TOXO94900 526 aa16.03■□□□□ 0.16
SREBF1-213ENST00000485080 PGM3O95394 542 aa16.03■□□□□ 0.16
SREBF1-213ENST00000485080 CLDN14O95500 239 aa16.03■□□□□ 0.16
SREBF1-213ENST00000485080 UBTFL6P0CB48 400 aaPredicted RBP16.03■□□□□ 0.16
SREBF1-213ENST00000485080 GP1BBP13224 206 aa16.03■□□□□ 0.16
SREBF1-213ENST00000485080 ETS2P15036 469 aa16.03■□□□□ 0.16
SREBF1-213ENST00000485080 IL7RP16871 459 aa16.03■□□□□ 0.16
SREBF1-213ENST00000485080 PGCP20142 388 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms