RNA–Protein interactions for RNA: ENST00000483847.1

SMARCC1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 804 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-205ENST00000483847 HOXB13Q92826 284 aaPredicted RBP9.55□□□□□ -0.88
SMARCC1-205ENST00000483847 SORCS2Q96PQ0 1159 aa9.55□□□□□ -0.88
SMARCC1-205ENST00000483847 PIMREGQ9BSJ6 248 aa9.55□□□□□ -0.88
SMARCC1-205ENST00000483847 ANKZF1Q9H8Y5 726 aa9.55□□□□□ -0.88
SMARCC1-205ENST00000483847 C3orf14Q9HBI5 128 aa9.55□□□□□ -0.88
SMARCC1-205ENST00000483847 TMCO1Q9UM00 188 aa9.55□□□□□ -0.88
SMARCC1-205ENST00000483847 SLC25A15Q9Y619 301 aa9.55□□□□□ -0.88
SMARCC1-205ENST00000483847 ATP23Q9Y6H3 246 aa9.55□□□□□ -0.88
SMARCC1-205ENST00000483847 LRP5LA4QPB2 252 aa9.54□□□□□ -0.88
SMARCC1-205ENST00000483847 A8MT66 165 aa9.54□□□□□ -0.88
SMARCC1-205ENST00000483847 NDUFS8O00217 210 aa9.54□□□□□ -0.88
SMARCC1-205ENST00000483847 SLITRK5O94991 958 aa9.54□□□□□ -0.88
SMARCC1-205ENST00000483847 KRT6AP02538 564 aa9.54□□□□□ -0.88
SMARCC1-205ENST00000483847 KRT6BP04259 564 aa9.54□□□□□ -0.88
SMARCC1-205ENST00000483847 RBP1P09455 135 aa9.54□□□□□ -0.88
SMARCC1-205ENST00000483847 ACP2P11117 423 aa9.54□□□□□ -0.88
SMARCC1-205ENST00000483847 ZNF23P17027 643 aa9.54□□□□□ -0.88
SMARCC1-205ENST00000483847 ELK4P28324 431 aa9.54□□□□□ -0.88
SMARCC1-205ENST00000483847 IL2RGP31785 369 aa9.54□□□□□ -0.88
SMARCC1-205ENST00000483847 HSD17B3P37058 310 aa9.54□□□□□ -0.88
SMARCC1-205ENST00000483847 EIF1P41567 113 aaKnown RBP9.54□□□□□ -0.88
SMARCC1-205ENST00000483847 KRT6CP48668 564 aa9.54□□□□□ -0.88
SMARCC1-205ENST00000483847 FOXG1P55316 489 aaPredicted RBP9.54□□□□□ -0.88
SMARCC1-205ENST00000483847 CHRNB3Q05901 458 aa9.54□□□□□ -0.88
SMARCC1-205ENST00000483847 RASGEF1BQ0VAM2 473 aa9.54□□□□□ -0.88
SMARCC1-205ENST00000483847 TOMM34Q15785 309 aaPredicted RBP9.54□□□□□ -0.88
SMARCC1-205ENST00000483847 MST1LQ2TV78 715 aa9.54□□□□□ -0.88
SMARCC1-205ENST00000483847 SPIN4Q56A73 249 aa9.54□□□□□ -0.88
SMARCC1-205ENST00000483847 KLHL17Q6TDP4 642 aa9.54□□□□□ -0.88
SMARCC1-205ENST00000483847 CBLN3Q6UW01 205 aa9.54□□□□□ -0.88
SMARCC1-205ENST00000483847 ZNF551Q7Z340 670 aaPredicted RBP9.54□□□□□ -0.88
SMARCC1-205ENST00000483847 SLC43A2Q8N370 569 aa9.54□□□□□ -0.88
SMARCC1-205ENST00000483847 ANKS4BQ8N8V4 417 aa9.54□□□□□ -0.88
SMARCC1-205ENST00000483847 PUM2Q8TB72 1066 aaKnown RBP eCLIP9.54□□□□□ -0.88
SMARCC1-205ENST00000483847 ZFP90Q8TF47 636 aa9.54□□□□□ -0.88
SMARCC1-205ENST00000483847 FBXO17Q96EF6 278 aa9.54□□□□□ -0.88
SMARCC1-205ENST00000483847 OTUB1Q96FW1 271 aaPredicted RBP9.54□□□□□ -0.88
SMARCC1-205ENST00000483847 ERP44Q9BS26 406 aa9.54□□□□□ -0.88
SMARCC1-205ENST00000483847 SHCBP1LQ9BZQ2 653 aa9.54□□□□□ -0.88
SMARCC1-205ENST00000483847 MIEF1Q9NQG6 463 aa9.54□□□□□ -0.88
SMARCC1-205ENST00000483847 TAS2R7Q9NYW3 318 aa9.54□□□□□ -0.88
SMARCC1-205ENST00000483847 KLHL9Q9P2J3 617 aa9.54□□□□□ -0.88
SMARCC1-205ENST00000483847 GRID1Q9ULK0 1009 aa9.54□□□□□ -0.88
SMARCC1-205ENST00000483847 TRAF6Q9Y4K3 522 aa9.54□□□□□ -0.88
SMARCC1-205ENST00000483847 PMF1-BGLAPU3KQ54 211 aa9.54□□□□□ -0.88
SMARCC1-205ENST00000483847 HEATR1Q9H583 2144 aaKnown RBP9.53□□□□□ -0.88
SMARCC1-205ENST00000483847 CCDC188H7C350 402 aa9.53□□□□□ -0.88
SMARCC1-205ENST00000483847 CYTIPO60759 359 aa9.53□□□□□ -0.88
SMARCC1-205ENST00000483847 ULK1O75385 1050 aa9.53□□□□□ -0.88
SMARCC1-205ENST00000483847 KCNK2O95069 426 aa9.53□□□□□ -0.88
SMARCC1-205ENST00000483847 PRPS2P11908 318 aa9.53□□□□□ -0.88
SMARCC1-205ENST00000483847 BMP4P12644 408 aa9.53□□□□□ -0.88
SMARCC1-205ENST00000483847 NTSP30990 170 aa9.53□□□□□ -0.88
SMARCC1-205ENST00000483847 SRP14P37108 136 aaKnown RBP9.53□□□□□ -0.88
SMARCC1-205ENST00000483847 PLTPP55058 493 aa9.53□□□□□ -0.88
SMARCC1-205ENST00000483847 GUCY2DQ02846 1103 aa9.53□□□□□ -0.88
SMARCC1-205ENST00000483847 CLCQ05315 142 aa9.53□□□□□ -0.88
SMARCC1-205ENST00000483847 ZNF763Q0D2J5 394 aa9.53□□□□□ -0.88
SMARCC1-205ENST00000483847 DUSP5Q16690 384 aa9.53□□□□□ -0.88
SMARCC1-205ENST00000483847 SWI5Q1ZZU3 235 aa9.53□□□□□ -0.88
SMARCC1-205ENST00000483847 NDUFAF6Q330K2 333 aa9.53□□□□□ -0.88
SMARCC1-205ENST00000483847 IQCCQ4KMZ1 466 aa9.53□□□□□ -0.88
SMARCC1-205ENST00000483847 ARL13AQ5H913 290 aaPredicted RBP9.53□□□□□ -0.88
SMARCC1-205ENST00000483847 CCNJQ5T5M9 372 aa9.53□□□□□ -0.88
SMARCC1-205ENST00000483847 FAM71E1Q6IPT2 247 aa9.53□□□□□ -0.88
SMARCC1-205ENST00000483847 SSX8Q7RTT4 187 aa9.53□□□□□ -0.88
SMARCC1-205ENST00000483847 ZNF100Q8IYN0 542 aa9.53□□□□□ -0.88
SMARCC1-205ENST00000483847 TMEM151AQ8N4L1 468 aa9.53□□□□□ -0.88
SMARCC1-205ENST00000483847 SLC16A11Q8NCK7 471 aa9.53□□□□□ -0.88
SMARCC1-205ENST00000483847 SEMA6DQ8NFY4 1073 aa9.53□□□□□ -0.88
SMARCC1-205ENST00000483847 METTL6Q8TCB7 284 aa9.53□□□□□ -0.88
SMARCC1-205ENST00000483847 KCNA7Q96RP8 456 aa9.53□□□□□ -0.88
SMARCC1-205ENST00000483847 C1QTNF3Q9BXJ4 246 aa9.53□□□□□ -0.88
SMARCC1-205ENST00000483847 BHLHE41Q9C0J9 482 aaPredicted RBP9.53□□□□□ -0.88
SMARCC1-205ENST00000483847 BPESC1Q9GZL8 116 aa9.53□□□□□ -0.88
SMARCC1-205ENST00000483847 MYNNQ9NPC7 610 aa9.53□□□□□ -0.88
SMARCC1-205ENST00000483847 UBQLN4Q9NRR5 601 aa9.53□□□□□ -0.88
SMARCC1-205ENST00000483847 NTMQ9P121 344 aa9.53□□□□□ -0.88
SMARCC1-205ENST00000483847 TMEFF2Q9UIK5 374 aaPredicted RBP9.53□□□□□ -0.88
SMARCC1-205ENST00000483847 TIMM22Q9Y584 194 aa9.53□□□□□ -0.88
SMARCC1-205ENST00000483847 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.53□□□□□ -0.88
SMARCC1-205ENST00000483847 GIMAP1-GIMAP5A0A087WTJ2 511 aa9.52□□□□□ -0.89
SMARCC1-205ENST00000483847 LOC390937A0A1W2PQ73 354 aa9.52□□□□□ -0.89
SMARCC1-205ENST00000483847 A0A1W2PQD3 144 aa9.52□□□□□ -0.89
SMARCC1-205ENST00000483847 CIB4A0PJX0 185 aa9.52□□□□□ -0.89
SMARCC1-205ENST00000483847 TTC36A6NLP5 189 aa9.52□□□□□ -0.89
SMARCC1-205ENST00000483847 GJE1A6NN92 205 aa9.52□□□□□ -0.89
SMARCC1-205ENST00000483847 ZNF724A8MTY0 619 aa9.52□□□□□ -0.89
SMARCC1-205ENST00000483847 ATP6V1G2-DDX39BF2Z307 99 aa9.52□□□□□ -0.89
SMARCC1-205ENST00000483847 SCDO00767 359 aa9.52□□□□□ -0.89
SMARCC1-205ENST00000483847 H6PDO95479 791 aa9.52□□□□□ -0.89
SMARCC1-205ENST00000483847 NUDT14O95848 222 aa9.52□□□□□ -0.89
SMARCC1-205ENST00000483847 HPGDP15428 266 aa9.52□□□□□ -0.89
SMARCC1-205ENST00000483847 PRKCAP17252 672 aa9.52□□□□□ -0.89
SMARCC1-205ENST00000483847 HMOX2P30519 316 aa9.52□□□□□ -0.89
SMARCC1-205ENST00000483847 SLC7A1P30825 629 aa9.52□□□□□ -0.89
SMARCC1-205ENST00000483847 APOBEC3AP31941 199 aaPredicted RBP9.52□□□□□ -0.89
SMARCC1-205ENST00000483847 NTF4P34130 210 aa9.52□□□□□ -0.89
SMARCC1-205ENST00000483847 MAGEA12P43365 314 aa9.52□□□□□ -0.89
SMARCC1-205ENST00000483847 PRKAG1P54619 331 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms