RNA–Protein interactions for RNA: ENST00000483506.1

HDAC6-225, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-225ENST00000483506 GTPBP1O00178 669 aaKnown RBP16.23■□□□□ 0.19
HDAC6-225ENST00000483506 NTN1O95631 604 aa16.23■□□□□ 0.19
HDAC6-225ENST00000483506 IL2RAP01589 272 aa16.23■□□□□ 0.19
HDAC6-225ENST00000483506 IGFBP2P18065 325 aa16.23■□□□□ 0.19
HDAC6-225ENST00000483506 ELK4P28324 431 aa16.23■□□□□ 0.19
HDAC6-225ENST00000483506 PGM1P36871 562 aa16.23■□□□□ 0.19
HDAC6-225ENST00000483506 MDH1P40925 334 aaKnown RBP16.23■□□□□ 0.19
HDAC6-225ENST00000483506 ZNF136P52737 540 aa16.23■□□□□ 0.19
HDAC6-225ENST00000483506 SUCLG1P53597 346 aaKnown RBP16.23■□□□□ 0.19
HDAC6-225ENST00000483506 EEFSECP57772 596 aaKnown RBP16.23■□□□□ 0.19
HDAC6-225ENST00000483506 FADDQ13158 208 aa16.23■□□□□ 0.19
HDAC6-225ENST00000483506 NDUFAF6Q330K2 333 aa16.23■□□□□ 0.19
HDAC6-225ENST00000483506 GPAT3Q53EU6 434 aa16.23■□□□□ 0.19
HDAC6-225ENST00000483506 SLC25A53Q5H9E4 307 aa16.23■□□□□ 0.19
HDAC6-225ENST00000483506 PAGE3Q5JUK9 113 aa16.23■□□□□ 0.19
HDAC6-225ENST00000483506 EIF3MQ7L2H7 374 aaKnown RBP16.23■□□□□ 0.19
HDAC6-225ENST00000483506 GGNQ86UU5 652 aa16.23■□□□□ 0.19
HDAC6-225ENST00000483506 LIX1LQ8IVB5 337 aa16.23■□□□□ 0.19
HDAC6-225ENST00000483506 MSRB3Q8IXL7 192 aa16.23■□□□□ 0.19
HDAC6-225ENST00000483506 METTL25Q8N6Q8 603 aa16.23■□□□□ 0.19
HDAC6-225ENST00000483506 ZNF614Q8N883 585 aa16.23■□□□□ 0.19
HDAC6-225ENST00000483506 C9orf106Q8NAJ2 232 aa16.23■□□□□ 0.19
HDAC6-225ENST00000483506 OR5W2Q8NH69 310 aa16.23■□□□□ 0.19
HDAC6-225ENST00000483506 TSPEARQ8WU66 669 aa16.23■□□□□ 0.19
HDAC6-225ENST00000483506 ZG16BQ96DA0 208 aa16.23■□□□□ 0.19
HDAC6-225ENST00000483506 RNF145Q96MT1 663 aa16.23■□□□□ 0.19
HDAC6-225ENST00000483506 TM9SF2Q99805 663 aa16.23■□□□□ 0.19
HDAC6-225ENST00000483506 TMEM120AQ9BXJ8 343 aa16.23■□□□□ 0.19
HDAC6-225ENST00000483506 RAD21L1Q9H4I0 556 aa16.23■□□□□ 0.19
HDAC6-225ENST00000483506 RUBCNLQ9H714 662 aa16.23■□□□□ 0.19
HDAC6-225ENST00000483506 KCNJ16Q9NPI9 418 aa16.23■□□□□ 0.19
HDAC6-225ENST00000483506 SLC25A37Q9NYZ2 338 aa16.23■□□□□ 0.19
HDAC6-225ENST00000483506 STOML1Q9UBI4 398 aa16.23■□□□□ 0.19
HDAC6-225ENST00000483506 P2RX2Q9UBL9 471 aa16.23■□□□□ 0.19
HDAC6-225ENST00000483506 ZNF629Q9UEG4 869 aaPredicted RBP16.23■□□□□ 0.19
HDAC6-225ENST00000483506 SLC35A3Q9Y2D2 325 aa16.23■□□□□ 0.19
HDAC6-225ENST00000483506 GPC6Q9Y625 555 aaPredicted RBP16.23■□□□□ 0.19
HDAC6-225ENST00000483506 PKDREJQ9NTG1 2253 aa16.22■□□□□ 0.19
HDAC6-225ENST00000483506 AGAP5A6NIR3 686 aa16.22■□□□□ 0.19
HDAC6-225ENST00000483506 FAM90A27PA6NNH2 459 aa16.22■□□□□ 0.19
HDAC6-225ENST00000483506 CYSRT1A8MQ03 144 aa16.22■□□□□ 0.19
HDAC6-225ENST00000483506 H3BML4 177 aa16.22■□□□□ 0.19
HDAC6-225ENST00000483506 RCBTB2O95199 551 aa16.22■□□□□ 0.19
HDAC6-225ENST00000483506 IL18BPO95998 194 aa16.22■□□□□ 0.19
HDAC6-225ENST00000483506 TFPTP0C1Z6 253 aa16.22■□□□□ 0.19
HDAC6-225ENST00000483506 ETFAP13804 333 aa16.22■□□□□ 0.19
HDAC6-225ENST00000483506 CD1EP15812 388 aa16.22■□□□□ 0.19
HDAC6-225ENST00000483506 NCF2P19878 526 aaPredicted RBP16.22■□□□□ 0.19
HDAC6-225ENST00000483506 RNF144AP50876 292 aaPredicted RBP16.22■□□□□ 0.19
HDAC6-225ENST00000483506 DLX5P56178 289 aa16.22■□□□□ 0.19
HDAC6-225ENST00000483506 CLDN20P56880 219 aa16.22■□□□□ 0.19
HDAC6-225ENST00000483506 DSTNP60981 165 aa16.22■□□□□ 0.19
HDAC6-225ENST00000483506 RAC1P63000 192 aa16.22■□□□□ 0.19
HDAC6-225ENST00000483506 PLAURQ03405 335 aa16.22■□□□□ 0.19
HDAC6-225ENST00000483506 RGNQ15493 299 aa16.22■□□□□ 0.19
HDAC6-225ENST00000483506 ZNF787Q6DD87 383 aa16.22■□□□□ 0.19
HDAC6-225ENST00000483506 CMIPQ8IY22 773 aa16.22■□□□□ 0.19
HDAC6-225ENST00000483506 ADGRG7Q96K78 797 aa16.22■□□□□ 0.19
HDAC6-225ENST00000483506 ZNF317Q96PQ6 595 aaPredicted RBP16.22■□□□□ 0.19
HDAC6-225ENST00000483506 UCK2Q9BZX2 261 aa16.22■□□□□ 0.19
HDAC6-225ENST00000483506 ENKD1Q9H0I2 346 aa16.22■□□□□ 0.19
HDAC6-225ENST00000483506 MTHFD2LQ9H903 347 aaPredicted RBP16.22■□□□□ 0.19
HDAC6-225ENST00000483506 EXOSC3Q9NQT5 275 aaKnown RBP16.22■□□□□ 0.19
HDAC6-225ENST00000483506 MRGBPQ9NV56 204 aa16.22■□□□□ 0.19
HDAC6-225ENST00000483506 CALML5Q9NZT1 146 aa16.22■□□□□ 0.19
HDAC6-225ENST00000483506 SLAMF8Q9P0V8 285 aa16.22■□□□□ 0.19
HDAC6-225ENST00000483506 MED12LQ86YW9 2145 aa16.22■□□□□ 0.19
HDAC6-225ENST00000483506 NAV2Q8IVL1 2488 aa16.21■□□□□ 0.19
HDAC6-225ENST00000483506 NKX2-6A6NCS4 301 aa16.21■□□□□ 0.19
HDAC6-225ENST00000483506 H0YC42 278 aa16.21■□□□□ 0.19
HDAC6-225ENST00000483506 CLIC1O00299 241 aa16.21■□□□□ 0.19
HDAC6-225ENST00000483506 DVL2O14641 736 aa16.21■□□□□ 0.19
HDAC6-225ENST00000483506 HNRNPRO43390 633 aaKnown RBP16.21■□□□□ 0.19
HDAC6-225ENST00000483506 CSTAP01040 98 aa16.21■□□□□ 0.19
HDAC6-225ENST00000483506 VIMP08670 466 aaKnown RBP16.21■□□□□ 0.19
HDAC6-225ENST00000483506 NR2F1P10589 423 aa16.21■□□□□ 0.19
HDAC6-225ENST00000483506 PRKCAP17252 672 aa16.21■□□□□ 0.19
HDAC6-225ENST00000483506 CTSSP25774 331 aa16.21■□□□□ 0.19
HDAC6-225ENST00000483506 CRATP43155 626 aa16.21■□□□□ 0.19
HDAC6-225ENST00000483506 TPD52P55327 224 aaPredicted RBP16.21■□□□□ 0.19
HDAC6-225ENST00000483506 FOXF1Q12946 379 aa16.21■□□□□ 0.19
HDAC6-225ENST00000483506 CBFBQ13951 182 aa16.21■□□□□ 0.19
HDAC6-225ENST00000483506 DPP10Q8N608 796 aa16.21■□□□□ 0.19
HDAC6-225ENST00000483506 RELL2Q8NC24 303 aaPredicted RBP16.21■□□□□ 0.19
HDAC6-225ENST00000483506 SLC38A5Q8WUX1 472 aa16.21■□□□□ 0.19
HDAC6-225ENST00000483506 ZNF524Q96C55 264 aa16.21■□□□□ 0.19
HDAC6-225ENST00000483506 MRGPRX4Q96LA9 322 aa16.21■□□□□ 0.19
HDAC6-225ENST00000483506 SPOCK3Q9BQ16 436 aa16.21■□□□□ 0.19
HDAC6-225ENST00000483506 NPDC1Q9NQX5 325 aaPredicted RBP16.21■□□□□ 0.19
HDAC6-225ENST00000483506 ST6GALNAC1Q9NSC7 600 aaPredicted RBP16.21■□□□□ 0.19
HDAC6-225ENST00000483506 VAPAQ9P0L0 249 aa16.21■□□□□ 0.19
HDAC6-225ENST00000483506 ZNF175Q9Y473 711 aa16.21■□□□□ 0.19
HDAC6-225ENST00000483506 TNFSF12-TNFSF13A0A0A6YY99 330 aa16.2■□□□□ 0.18
HDAC6-225ENST00000483506 ADAMDEC1O15204 470 aa16.2■□□□□ 0.18
HDAC6-225ENST00000483506 BCAS1O75363 584 aaPredicted RBP16.2■□□□□ 0.18
HDAC6-225ENST00000483506 TGM6O95932 706 aa16.2■□□□□ 0.18
HDAC6-225ENST00000483506 PPIBP23284 216 aaKnown RBP16.2■□□□□ 0.18
HDAC6-225ENST00000483506 ARFIP2P53365 341 aa16.2■□□□□ 0.18
HDAC6-225ENST00000483506 CRISP3P54108 245 aa16.2■□□□□ 0.18
HDAC6-225ENST00000483506 RPS3AP61247 264 aaKnown RBP16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms