RNA–Protein interactions for RNA: ENST00000482647.5

SEC13-217, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-217ENST00000482647 CMIPQ8IY22 773 aa18.91■□□□□ 0.62
SEC13-217ENST00000482647 RPRMLQ8N4K4 120 aa18.91■□□□□ 0.62
SEC13-217ENST00000482647 ZNF808Q8N4W9 903 aaPredicted RBP18.91■□□□□ 0.62
SEC13-217ENST00000482647 METTL25Q8N6Q8 603 aa18.91■□□□□ 0.62
SEC13-217ENST00000482647 ZPLD1Q8TCW7 415 aa18.91■□□□□ 0.62
SEC13-217ENST00000482647 GPR119Q8TDV5 335 aa18.91■□□□□ 0.62
SEC13-217ENST00000482647 ITLN2Q8WWU7 325 aaPredicted RBP18.91■□□□□ 0.62
SEC13-217ENST00000482647 RND1Q92730 232 aa18.91■□□□□ 0.62
SEC13-217ENST00000482647 MAL2Q969L2 176 aa18.91■□□□□ 0.62
SEC13-217ENST00000482647 ARSGQ96EG1 525 aa18.91■□□□□ 0.62
SEC13-217ENST00000482647 PSMG3-AS1Q96PY0 264 aa18.91■□□□□ 0.62
SEC13-217ENST00000482647 CPPED1Q9BRF8 314 aaPredicted RBP18.91■□□□□ 0.62
SEC13-217ENST00000482647 IKZF5Q9H5V7 419 aa18.91■□□□□ 0.62
SEC13-217ENST00000482647 CACYBPQ9HB71 228 aaKnown RBP18.91■□□□□ 0.62
SEC13-217ENST00000482647 BCL2L10Q9HD36 194 aa18.91■□□□□ 0.62
SEC13-217ENST00000482647 COQ3Q9NZJ6 369 aa18.91■□□□□ 0.62
SEC13-217ENST00000482647 AP4B1Q9Y6B7 739 aa18.91■□□□□ 0.62
SEC13-217ENST00000482647 USP9YO00507 2555 aaPredicted RBP18.91■□□□□ 0.62
SEC13-217ENST00000482647 DIDO1Q9BTC0 2240 aaKnown RBP18.9■□□□□ 0.62
SEC13-217ENST00000482647 EPPINO95925 133 aa18.9■□□□□ 0.62
SEC13-217ENST00000482647 NPPAP01160 153 aa18.9■□□□□ 0.62
SEC13-217ENST00000482647 LINGO3P0C6S8 592 aa18.9■□□□□ 0.62
SEC13-217ENST00000482647 GLI4P10075 376 aa18.9■□□□□ 0.62
SEC13-217ENST00000482647 RPS4Y1P22090 263 aaKnown RBP18.9■□□□□ 0.62
SEC13-217ENST00000482647 CCR4P51679 360 aa18.9■□□□□ 0.62
SEC13-217ENST00000482647 CLDN18P56856 261 aa18.9■□□□□ 0.62
SEC13-217ENST00000482647 NUP107P57740 925 aa18.9■□□□□ 0.62
SEC13-217ENST00000482647 EEFSECP57772 596 aaKnown RBP18.9■□□□□ 0.62
SEC13-217ENST00000482647 TRMT5Q32P41 509 aaKnown RBP18.9■□□□□ 0.62
SEC13-217ENST00000482647 ACSF3Q4G176 576 aaPredicted RBP18.9■□□□□ 0.62
SEC13-217ENST00000482647 NCCRP1Q6ZVX7 275 aaPredicted RBP18.9■□□□□ 0.62
SEC13-217ENST00000482647 MEIOBQ8N635 442 aa18.9■□□□□ 0.62
SEC13-217ENST00000482647 PCYOX1LQ8NBM8 494 aa18.9■□□□□ 0.62
SEC13-217ENST00000482647 OR52P1PQ8NH57 321 aa18.9■□□□□ 0.62
SEC13-217ENST00000482647 WDR60Q8WVS4 1066 aa18.9■□□□□ 0.62
SEC13-217ENST00000482647 ZNF232Q9UNY5 417 aa18.9■□□□□ 0.62
SEC13-217ENST00000482647 DSPPQ9NZW4 1301 aa18.9■□□□□ 0.62
SEC13-217ENST00000482647 SHISA8B8ZZ34 492 aa18.89■□□□□ 0.61
SEC13-217ENST00000482647 H3BML4 177 aa18.89■□□□□ 0.61
SEC13-217ENST00000482647 MRASO14807 208 aa18.89■□□□□ 0.61
SEC13-217ENST00000482647 NID1P14543 1247 aa18.89■□□□□ 0.61
SEC13-217ENST00000482647 REP15Q6BDI9 236 aa18.89■□□□□ 0.61
SEC13-217ENST00000482647 CHMP1BQ7LBR1 199 aa18.89■□□□□ 0.61
SEC13-217ENST00000482647 FAM71CQ8NEG0 241 aa18.89■□□□□ 0.61
SEC13-217ENST00000482647 OR10Q1Q8NGQ4 319 aa18.89■□□□□ 0.61
SEC13-217ENST00000482647 RP9Q8TA86 221 aaKnown RBP18.89■□□□□ 0.61
SEC13-217ENST00000482647 BBS10Q8TAM1 723 aa18.89■□□□□ 0.61
SEC13-217ENST00000482647 LRRC58Q96CX6 371 aa18.89■□□□□ 0.61
SEC13-217ENST00000482647 TRIB1Q96RU8 372 aa18.89■□□□□ 0.61
SEC13-217ENST00000482647 SH3GL1Q99961 368 aa18.89■□□□□ 0.61
SEC13-217ENST00000482647 KLHDC3Q9BQ90 382 aa18.89■□□□□ 0.61
SEC13-217ENST00000482647 TMEM38AQ9H6F2 299 aa18.89■□□□□ 0.61
SEC13-217ENST00000482647 CALHM2Q9HA72 323 aa18.89■□□□□ 0.61
SEC13-217ENST00000482647 EXOSC3Q9NQT5 275 aaKnown RBP18.89■□□□□ 0.61
SEC13-217ENST00000482647 GID8Q9NWU2 228 aa18.89■□□□□ 0.61
SEC13-217ENST00000482647 FAM53CQ9NYF3 392 aa18.89■□□□□ 0.61
SEC13-217ENST00000482647 GPC6Q9Y625 555 aaPredicted RBP18.89■□□□□ 0.61
SEC13-217ENST00000482647 FREM3P0C091 2139 aa18.88■□□□□ 0.61
SEC13-217ENST00000482647 CD8B2A6NJW9 211 aa18.88■□□□□ 0.61
SEC13-217ENST00000482647 CLDN24A6NM45 220 aa18.88■□□□□ 0.61
SEC13-217ENST00000482647 DNAJA2O60884 412 aa18.88■□□□□ 0.61
SEC13-217ENST00000482647 PGM3O95394 542 aa18.88■□□□□ 0.61
SEC13-217ENST00000482647 ARAFP10398 606 aa18.88■□□□□ 0.61
SEC13-217ENST00000482647 PGCP20142 388 aa18.88■□□□□ 0.61
SEC13-217ENST00000482647 SLC6A2P23975 617 aa18.88■□□□□ 0.61
SEC13-217ENST00000482647 ADH6P28332 368 aa18.88■□□□□ 0.61
SEC13-217ENST00000482647 MTPNP58546 118 aa18.88■□□□□ 0.61
SEC13-217ENST00000482647 CDK6Q00534 326 aa18.88■□□□□ 0.61
SEC13-217ENST00000482647 CAPRIN1Q14444 709 aaKnown RBP18.88■□□□□ 0.61
SEC13-217ENST00000482647 LARS2Q15031 903 aaKnown RBP18.88■□□□□ 0.61
SEC13-217ENST00000482647 ZSWIM7Q19AV6 140 aa18.88■□□□□ 0.61
SEC13-217ENST00000482647 LIN52Q52LA3 116 aa18.88■□□□□ 0.61
SEC13-217ENST00000482647 RPS26P11Q5JNZ5 115 aaPredicted RBP18.88■□□□□ 0.61
SEC13-217ENST00000482647 NSUN5P2Q63ZY6 315 aa18.88■□□□□ 0.61
SEC13-217ENST00000482647 REEP3Q6NUK4 255 aa18.88■□□□□ 0.61
SEC13-217ENST00000482647 LACC1Q8IV20 430 aa18.88■□□□□ 0.61
SEC13-217ENST00000482647 UBQLNLQ8IYU4 475 aa18.88■□□□□ 0.61
SEC13-217ENST00000482647 C10orf111Q8N326 155 aa18.88■□□□□ 0.61
SEC13-217ENST00000482647 MRGPRX4Q96LA9 322 aa18.88■□□□□ 0.61
SEC13-217ENST00000482647 RNF145Q96MT1 663 aa18.88■□□□□ 0.61
SEC13-217ENST00000482647 TUBA1CQ9BQE3 449 aa18.88■□□□□ 0.61
SEC13-217ENST00000482647 IFT52Q9Y366 437 aa18.88■□□□□ 0.61
SEC13-217ENST00000482647 SPTAN1Q13813 2472 aaKnown RBP18.88■□□□□ 0.61
SEC13-217ENST00000482647 UTP20O75691 2785 aaKnown RBP18.87■□□□□ 0.61
SEC13-217ENST00000482647 THBS1P07996 1170 aa18.87■□□□□ 0.61
SEC13-217ENST00000482647 PRKCAP17252 672 aa18.87■□□□□ 0.61
SEC13-217ENST00000482647 ME2P23368 584 aa18.87■□□□□ 0.61
SEC13-217ENST00000482647 PSMA4P25789 261 aaKnown RBP18.87■□□□□ 0.61
SEC13-217ENST00000482647 SLC6A8P48029 635 aa18.87■□□□□ 0.61
SEC13-217ENST00000482647 RAC1P63000 192 aa18.87■□□□□ 0.61
SEC13-217ENST00000482647 QPRTQ15274 297 aa18.87■□□□□ 0.61
SEC13-217ENST00000482647 TOMM34Q15785 309 aaPredicted RBP18.87■□□□□ 0.61
SEC13-217ENST00000482647 ADRM1Q16186 407 aa18.87■□□□□ 0.61
SEC13-217ENST00000482647 CYP51A1Q16850 503 aa18.87■□□□□ 0.61
SEC13-217ENST00000482647 NANOGP8Q6NSW7 305 aa18.87■□□□□ 0.61
SEC13-217ENST00000482647 PIGWQ7Z7B1 504 aa18.87■□□□□ 0.61
SEC13-217ENST00000482647 FBXO27Q8NI29 283 aa18.87■□□□□ 0.61
SEC13-217ENST00000482647 NFKBIDQ8NI38 313 aa18.87■□□□□ 0.61
SEC13-217ENST00000482647 POC1BQ8TC44 478 aa18.87■□□□□ 0.61
SEC13-217ENST00000482647 ASB5Q8WWX0 329 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms