RNA–Protein interactions for RNA: ENST00000481121.5

NELFE-208, Transcript of negative elongation factor complex member E, humanhuman

TSL 2

Gene NELFE, Length 1,543 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-208ENST00000481121 PLXDC2Q6UX71 529 aa18.76■□□□□ 0.59
NELFE-208ENST00000481121 EIF3MQ7L2H7 374 aaKnown RBP18.76■□□□□ 0.59
NELFE-208ENST00000481121 LIX1LQ8IVB5 337 aa18.76■□□□□ 0.59
NELFE-208ENST00000481121 UCN2Q96RP3 112 aa18.76■□□□□ 0.59
NELFE-208ENST00000481121 NPAS1Q99742 590 aa18.76■□□□□ 0.59
NELFE-208ENST00000481121 TM9SF2Q99805 663 aa18.76■□□□□ 0.59
NELFE-208ENST00000481121 SLC38A1Q9H2H9 487 aa18.76■□□□□ 0.59
NELFE-208ENST00000481121 PCDHB14Q9Y5E9 798 aa18.76■□□□□ 0.59
NELFE-208ENST00000481121 H0YC42 278 aa18.75■□□□□ 0.59
NELFE-208ENST00000481121 CYP7B1O75881 506 aa18.75■□□□□ 0.59
NELFE-208ENST00000481121 CHRM4P08173 479 aa18.75■□□□□ 0.59
NELFE-208ENST00000481121 UBTFL6P0CB48 400 aaPredicted RBP18.75■□□□□ 0.59
NELFE-208ENST00000481121 COX6B1P14854 86 aa18.75■□□□□ 0.59
NELFE-208ENST00000481121 BMP5P22003 454 aa18.75■□□□□ 0.59
NELFE-208ENST00000481121 ME2P23368 584 aa18.75■□□□□ 0.59
NELFE-208ENST00000481121 EIF1P41567 113 aaKnown RBP18.75■□□□□ 0.59
NELFE-208ENST00000481121 ZNF136P52737 540 aa18.75■□□□□ 0.59
NELFE-208ENST00000481121 SUCLG1P53597 346 aaKnown RBP18.75■□□□□ 0.59
NELFE-208ENST00000481121 TPD52P55327 224 aaPredicted RBP18.75■□□□□ 0.59
NELFE-208ENST00000481121 RPS3AP61247 264 aaKnown RBP18.75■□□□□ 0.59
NELFE-208ENST00000481121 SKP2Q13309 424 aa18.75■□□□□ 0.59
NELFE-208ENST00000481121 CBFBQ13951 182 aa18.75■□□□□ 0.59
NELFE-208ENST00000481121 LRRC74BQ6ZQY2 392 aa18.75■□□□□ 0.59
NELFE-208ENST00000481121 HMGN2P46Q86SG4 172 aa18.75■□□□□ 0.59
NELFE-208ENST00000481121 OR5W2Q8NH69 310 aa18.75■□□□□ 0.59
NELFE-208ENST00000481121 WNT2BQ93097 391 aa18.75■□□□□ 0.59
NELFE-208ENST00000481121 MARVELD3Q96A59 401 aa18.75■□□□□ 0.59
NELFE-208ENST00000481121 QRSL1Q9H0R6 528 aaKnown RBP18.75■□□□□ 0.59
NELFE-208ENST00000481121 RAD21L1Q9H4I0 556 aa18.75■□□□□ 0.59
NELFE-208ENST00000481121 ZNF385DQ9H6B1 395 aa18.75■□□□□ 0.59
NELFE-208ENST00000481121 CCDC134Q9H6E4 229 aa18.75■□□□□ 0.59
NELFE-208ENST00000481121 RUBCNLQ9H714 662 aa18.75■□□□□ 0.59
NELFE-208ENST00000481121 ZNF629Q9UEG4 869 aaPredicted RBP18.75■□□□□ 0.59
NELFE-208ENST00000481121 SLC35A3Q9Y2D2 325 aa18.75■□□□□ 0.59
NELFE-208ENST00000481121 NAV2Q8IVL1 2488 aa18.75■□□□□ 0.59
NELFE-208ENST00000481121 CACNA1DQ01668 2161 aa18.75■□□□□ 0.59
NELFE-208ENST00000481121 TMIGD3P0DMS9 266 aaPredicted RBP18.74■□□□□ 0.59
NELFE-208ENST00000481121 HOXB9P17482 250 aaPredicted RBP18.74■□□□□ 0.59
NELFE-208ENST00000481121 PSMA4P25789 261 aaKnown RBP18.74■□□□□ 0.59
NELFE-208ENST00000481121 CLDN15P56746 228 aa18.74■□□□□ 0.59
NELFE-208ENST00000481121 TFF3Q07654 80 aa18.74■□□□□ 0.59
NELFE-208ENST00000481121 LRIF1Q5T3J3 769 aa18.74■□□□□ 0.59
NELFE-208ENST00000481121 AP1ARQ63HQ0 302 aa18.74■□□□□ 0.59
NELFE-208ENST00000481121 P4HA3Q7Z4N8 544 aa18.74■□□□□ 0.59
NELFE-208ENST00000481121 GGNQ86UU5 652 aa18.74■□□□□ 0.59
NELFE-208ENST00000481121 POC1BQ8TC44 478 aa18.74■□□□□ 0.59
NELFE-208ENST00000481121 ZFP3Q96NJ6 502 aa18.74■□□□□ 0.59
NELFE-208ENST00000481121 PINK1Q9BXM7 581 aa18.74■□□□□ 0.59
NELFE-208ENST00000481121 LAT2Q9GZY6 243 aa18.74■□□□□ 0.59
NELFE-208ENST00000481121 SLC52A3Q9NQ40 469 aa18.74■□□□□ 0.59
NELFE-208ENST00000481121 GPC6Q9Y625 555 aaPredicted RBP18.74■□□□□ 0.59
NELFE-208ENST00000481121 A0A1W2PP18 115 aa18.74■□□□□ 0.59
NELFE-208ENST00000481121 SLC22A20A6NK97 555 aa18.74■□□□□ 0.59
NELFE-208ENST00000481121 CLIC1O00299 241 aa18.74■□□□□ 0.59
NELFE-208ENST00000481121 EIF1AYO14602 144 aaKnown RBP18.74■□□□□ 0.59
NELFE-208ENST00000481121 BCHEP06276 602 aa18.74■□□□□ 0.59
NELFE-208ENST00000481121 SNRPB2P08579 225 aaKnown RBP18.74■□□□□ 0.59
NELFE-208ENST00000481121 ELK4P28324 431 aa18.74■□□□□ 0.59
NELFE-208ENST00000481121 PAGE3Q5JUK9 113 aa18.74■□□□□ 0.59
NELFE-208ENST00000481121 METTL21CQ5VZV1 264 aa18.74■□□□□ 0.59
NELFE-208ENST00000481121 METTL25Q8N6Q8 603 aa18.74■□□□□ 0.59
NELFE-208ENST00000481121 RELL2Q8NC24 303 aaPredicted RBP18.74■□□□□ 0.59
NELFE-208ENST00000481121 FAM71CQ8NEG0 241 aa18.74■□□□□ 0.59
NELFE-208ENST00000481121 GPR119Q8TDV5 335 aa18.74■□□□□ 0.59
NELFE-208ENST00000481121 ARSGQ96EG1 525 aa18.74■□□□□ 0.59
NELFE-208ENST00000481121 TMEM185BQ9H7F4 350 aa18.74■□□□□ 0.59
NELFE-208ENST00000481121 NPDC1Q9NQX5 325 aaPredicted RBP18.74■□□□□ 0.59
NELFE-208ENST00000481121 ST6GALNAC1Q9NSC7 600 aaPredicted RBP18.74■□□□□ 0.59
NELFE-208ENST00000481121 THUMPD1Q9NXG2 353 aaKnown RBP18.74■□□□□ 0.59
NELFE-208ENST00000481121 CALML5Q9NZT1 146 aa18.74■□□□□ 0.59
NELFE-208ENST00000481121 TMEM247A6NEH6 219 aa18.73■□□□□ 0.59
NELFE-208ENST00000481121 PRKCAP17252 672 aa18.73■□□□□ 0.59
NELFE-208ENST00000481121 CTSSP25774 331 aa18.73■□□□□ 0.59
NELFE-208ENST00000481121 ADH6P28332 368 aa18.73■□□□□ 0.59
NELFE-208ENST00000481121 PGM1P36871 562 aa18.73■□□□□ 0.59
NELFE-208ENST00000481121 MDH1P40925 334 aaKnown RBP18.73■□□□□ 0.59
NELFE-208ENST00000481121 CRISP3P54108 245 aa18.73■□□□□ 0.59
NELFE-208ENST00000481121 RAC1P63000 192 aa18.73■□□□□ 0.59
NELFE-208ENST00000481121 FADDQ13158 208 aa18.73■□□□□ 0.59
NELFE-208ENST00000481121 QPRTQ15274 297 aa18.73■□□□□ 0.59
NELFE-208ENST00000481121 RGNQ15493 299 aa18.73■□□□□ 0.59
NELFE-208ENST00000481121 TOMM34Q15785 309 aaPredicted RBP18.73■□□□□ 0.59
NELFE-208ENST00000481121 SGCBQ16585 318 aa18.73■□□□□ 0.59
NELFE-208ENST00000481121 CGB2Q6NT52 195 aa18.73■□□□□ 0.59
NELFE-208ENST00000481121 GCNT2Q8N0V5 402 aa18.73■□□□□ 0.59
NELFE-208ENST00000481121 FBXO27Q8NI29 283 aa18.73■□□□□ 0.59
NELFE-208ENST00000481121 WDR60Q8WVS4 1066 aa18.73■□□□□ 0.59
NELFE-208ENST00000481121 ZG16BQ96DA0 208 aa18.73■□□□□ 0.59
NELFE-208ENST00000481121 THUMPD3Q9BV44 507 aaKnown RBP18.73■□□□□ 0.59
NELFE-208ENST00000481121 SLC25A37Q9NYZ2 338 aa18.73■□□□□ 0.59
NELFE-208ENST00000481121 SLAMF8Q9P0V8 285 aa18.73■□□□□ 0.59
NELFE-208ENST00000481121 AGAP5A6NIR3 686 aa18.72■□□□□ 0.59
NELFE-208ENST00000481121 RCBTB2O95199 551 aa18.72■□□□□ 0.59
NELFE-208ENST00000481121 TGM6O95932 706 aa18.72■□□□□ 0.59
NELFE-208ENST00000481121 CD1EP15812 388 aa18.72■□□□□ 0.59
NELFE-208ENST00000481121 OPRM1P35372 400 aa18.72■□□□□ 0.59
NELFE-208ENST00000481121 EIF1AXP47813 144 aaKnown RBP18.72■□□□□ 0.59
NELFE-208ENST00000481121 ARFIP2P53365 341 aa18.72■□□□□ 0.59
NELFE-208ENST00000481121 KCNJ10P78508 379 aa18.72■□□□□ 0.59
NELFE-208ENST00000481121 SF3A3Q12874 501 aaKnown RBP eCLIP18.72■□□□□ 0.595e-7■■■■■ 27.1
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms