RNA–Protein interactions for RNA: ENST00000480020.5

HPS1-212, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 5

Gene HPS1, Length 795 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-212ENST00000480020 ADGRE4PQ86SQ3 457 aa11.24□□□□□ -0.61
HPS1-212ENST00000480020 TOR1AIP2Q8NFQ8 470 aa11.24□□□□□ -0.61
HPS1-212ENST00000480020 ZPLD1Q8TCW7 415 aa11.24□□□□□ -0.61
HPS1-212ENST00000480020 RND1Q92730 232 aa11.24□□□□□ -0.61
HPS1-212ENST00000480020 MAL2Q969L2 176 aa11.24□□□□□ -0.61
HPS1-212ENST00000480020 TMEM19Q96HH6 336 aa11.24□□□□□ -0.61
HPS1-212ENST00000480020 CGREF1Q99674 301 aa11.24□□□□□ -0.61
HPS1-212ENST00000480020 TREX2Q9BQ50 279 aaPredicted RBP11.24□□□□□ -0.61
HPS1-212ENST00000480020 TUBA1CQ9BQE3 449 aa11.24□□□□□ -0.61
HPS1-212ENST00000480020 FAM107BQ9H098 131 aa11.24□□□□□ -0.61
HPS1-212ENST00000480020 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.24□□□□□ -0.61
HPS1-212ENST00000480020 CALML5Q9NZT1 146 aa11.24□□□□□ -0.61
HPS1-212ENST00000480020 ARMCX1Q9P291 453 aa11.24□□□□□ -0.61
HPS1-212ENST00000480020 SLC35A3Q9Y2D2 325 aa11.24□□□□□ -0.61
HPS1-212ENST00000480020 CAPN7Q9Y6W3 813 aa11.24□□□□□ -0.61
HPS1-212ENST00000480020 GMNCA6NCL1 334 aa11.23□□□□□ -0.61
HPS1-212ENST00000480020 FAM47E-STBD1D6RA91 191 aa11.23□□□□□ -0.61
HPS1-212ENST00000480020 H0Y3Z8 333 aa11.23□□□□□ -0.61
HPS1-212ENST00000480020 H0YC42 278 aa11.23□□□□□ -0.61
HPS1-212ENST00000480020 ETV2O00321 342 aaPredicted RBP11.23□□□□□ -0.61
HPS1-212ENST00000480020 SLC22A2O15244 555 aa11.23□□□□□ -0.61
HPS1-212ENST00000480020 SNX3O60493 162 aa11.23□□□□□ -0.61
HPS1-212ENST00000480020 TOXO94900 526 aa11.23□□□□□ -0.61
HPS1-212ENST00000480020 NTN1O95631 604 aa11.23□□□□□ -0.61
HPS1-212ENST00000480020 UBTFL6P0CB48 400 aaPredicted RBP11.23□□□□□ -0.61
HPS1-212ENST00000480020 ARAFP10398 606 aa11.23□□□□□ -0.61
HPS1-212ENST00000480020 PEPDP12955 493 aa11.23□□□□□ -0.61
HPS1-212ENST00000480020 NID1P14543 1247 aa11.23□□□□□ -0.61
HPS1-212ENST00000480020 TPD52P55327 224 aaPredicted RBP11.23□□□□□ -0.61
HPS1-212ENST00000480020 CLDN20P56880 219 aa11.23□□□□□ -0.61
HPS1-212ENST00000480020 KCNJ10P78508 379 aa11.23□□□□□ -0.61
HPS1-212ENST00000480020 FOXF1Q12946 379 aa11.23□□□□□ -0.61
HPS1-212ENST00000480020 SELPLGQ14242 412 aa11.23□□□□□ -0.61
HPS1-212ENST00000480020 MAPRE2Q15555 327 aa11.23□□□□□ -0.61
HPS1-212ENST00000480020 TRMT5Q32P41 509 aaKnown RBP11.23□□□□□ -0.61
HPS1-212ENST00000480020 COQ5Q5HYK3 327 aa11.23□□□□□ -0.61
HPS1-212ENST00000480020 RIPPLY2Q5TAB7 128 aa11.23□□□□□ -0.61
HPS1-212ENST00000480020 PRAMEF8Q5VWM4 474 aa11.23□□□□□ -0.61
HPS1-212ENST00000480020 PRAMEF7Q5VXH5 474 aa11.23□□□□□ -0.61
HPS1-212ENST00000480020 MAMDC2Q7Z304 686 aaPredicted RBP11.23□□□□□ -0.61
HPS1-212ENST00000480020 SNX32Q86XE0 403 aa11.23□□□□□ -0.61
HPS1-212ENST00000480020 LACC1Q8IV20 430 aa11.23□□□□□ -0.61
HPS1-212ENST00000480020 CCDC71Q8IV32 467 aaPredicted RBP11.23□□□□□ -0.61
HPS1-212ENST00000480020 CMIPQ8IY22 773 aa11.23□□□□□ -0.61
HPS1-212ENST00000480020 TMCO5AQ8N6Q1 288 aa11.23□□□□□ -0.61
HPS1-212ENST00000480020 SDCCAG3Q96C92 435 aa11.23□□□□□ -0.61
HPS1-212ENST00000480020 RNF145Q96MT1 663 aa11.23□□□□□ -0.61
HPS1-212ENST00000480020 ANKRD27Q96NW4 1050 aa11.23□□□□□ -0.61
HPS1-212ENST00000480020 TRIM8Q9BZR9 551 aa11.23□□□□□ -0.61
HPS1-212ENST00000480020 NSRP1Q9H0G5 558 aaKnown RBP11.23□□□□□ -0.61
HPS1-212ENST00000480020 CALHM2Q9HA72 323 aa11.23□□□□□ -0.61
HPS1-212ENST00000480020 BCL2L10Q9HD36 194 aa11.23□□□□□ -0.61
HPS1-212ENST00000480020 FAM53CQ9NYF3 392 aa11.23□□□□□ -0.61
HPS1-212ENST00000480020 PLEKHB1Q9UF11 243 aaPredicted RBP11.23□□□□□ -0.61
HPS1-212ENST00000480020 CORO2BQ9UQ03 480 aa11.23□□□□□ -0.61
HPS1-212ENST00000480020 RNF6Q9Y252 685 aa11.23□□□□□ -0.61
HPS1-212ENST00000480020 AP4B1Q9Y6B7 739 aa11.23□□□□□ -0.61
HPS1-212ENST00000480020 UTP20O75691 2785 aaKnown RBP11.23□□□□□ -0.61
HPS1-212ENST00000480020 A0A0G2JNJ9 132 aa11.22□□□□□ -0.61
HPS1-212ENST00000480020 A0A0G2JPF8 293 aa11.22□□□□□ -0.61
HPS1-212ENST00000480020 MBD3L4A6NDZ8 208 aaPredicted RBP11.22□□□□□ -0.61
HPS1-212ENST00000480020 MBD3L3A6NE82 208 aaPredicted RBP11.22□□□□□ -0.61
HPS1-212ENST00000480020 TMEM247A6NEH6 219 aa11.22□□□□□ -0.61
HPS1-212ENST00000480020 MBD3L5A6NJ08 208 aaPredicted RBP11.22□□□□□ -0.61
HPS1-212ENST00000480020 CD8B2A6NJW9 211 aa11.22□□□□□ -0.61
HPS1-212ENST00000480020 CLCA1A8K7I4 914 aa11.22□□□□□ -0.61
HPS1-212ENST00000480020 BBIP1A8MTZ0 92 aa11.22□□□□□ -0.61
HPS1-212ENST00000480020 EVPLLA8MZ36 301 aa11.22□□□□□ -0.61
HPS1-212ENST00000480020 HNRNPCL2B2RXH8 293 aa11.22□□□□□ -0.61
HPS1-212ENST00000480020 HNRNPCL3B7ZW38 293 aa11.22□□□□□ -0.61
HPS1-212ENST00000480020 H3BML4 177 aa11.22□□□□□ -0.61
HPS1-212ENST00000480020 FXYD1O00168 92 aa11.22□□□□□ -0.61
HPS1-212ENST00000480020 EFNA2O43921 213 aa11.22□□□□□ -0.61
HPS1-212ENST00000480020 HNRNPCL1O60812 293 aaKnown RBP11.22□□□□□ -0.61
HPS1-212ENST00000480020 CCDC22O60826 627 aa11.22□□□□□ -0.61
HPS1-212ENST00000480020 ADAM11O75078 769 aa11.22□□□□□ -0.61
HPS1-212ENST00000480020 CYP7B1O75881 506 aa11.22□□□□□ -0.61
HPS1-212ENST00000480020 NUDT14O95848 222 aa11.22□□□□□ -0.61
HPS1-212ENST00000480020 DBIP07108 87 aaKnown RBP11.22□□□□□ -0.61
HPS1-212ENST00000480020 HNRNPCL4P0DMR1 293 aa11.22□□□□□ -0.61
HPS1-212ENST00000480020 PRKCAP17252 672 aa11.22□□□□□ -0.61
HPS1-212ENST00000480020 IL11P20809 199 aa11.22□□□□□ -0.61
HPS1-212ENST00000480020 EIF1P41567 113 aaKnown RBP11.22□□□□□ -0.61
HPS1-212ENST00000480020 CCR4P51679 360 aa11.22□□□□□ -0.61
HPS1-212ENST00000480020 SUCLG1P53597 346 aaKnown RBP11.22□□□□□ -0.61
HPS1-212ENST00000480020 MTPNP58546 118 aa11.22□□□□□ -0.61
HPS1-212ENST00000480020 ART3Q13508 389 aa11.22□□□□□ -0.61
HPS1-212ENST00000480020 CBFBQ13951 182 aa11.22□□□□□ -0.61
HPS1-212ENST00000480020 GNA13Q14344 377 aa11.22□□□□□ -0.61
HPS1-212ENST00000480020 CAPRIN1Q14444 709 aaKnown RBP11.22□□□□□ -0.61
HPS1-212ENST00000480020 QPRTQ15274 297 aa11.22□□□□□ -0.61
HPS1-212ENST00000480020 SF3B4Q15427 424 aaKnown RBP eCLIP11.22□□□□□ -0.617e-6■■■■□ 19.9
HPS1-212ENST00000480020 ADRM1Q16186 407 aa11.22□□□□□ -0.61
HPS1-212ENST00000480020 SLC25A53Q5H9E4 307 aa11.22□□□□□ -0.61
HPS1-212ENST00000480020 REP15Q6BDI9 236 aa11.22□□□□□ -0.61
HPS1-212ENST00000480020 GGNQ86UU5 652 aa11.22□□□□□ -0.61
HPS1-212ENST00000480020 VRK2Q86Y07 508 aa11.22□□□□□ -0.61
HPS1-212ENST00000480020 PEX5LQ8IYB4 626 aa11.22□□□□□ -0.61
HPS1-212ENST00000480020 UBQLNLQ8IYU4 475 aa11.22□□□□□ -0.61
HPS1-212ENST00000480020 MBD3L2Q8NHZ7 208 aaPredicted RBP11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms